RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 PREBQ9HCU5 417 aa18.44■□□□□ 0.54
CHMP2A-208ENST00000601220 TRIM38O00635 465 aa18.43■□□□□ 0.54
CHMP2A-208ENST00000601220 RNGTTO60942 597 aaKnown RBP18.43■□□□□ 0.54
CHMP2A-208ENST00000601220 JUPP14923 745 aa18.43■□□□□ 0.54
CHMP2A-208ENST00000601220 ZNF18P17022 549 aa18.43■□□□□ 0.54
CHMP2A-208ENST00000601220 RRM1P23921 792 aa18.43■□□□□ 0.54
CHMP2A-208ENST00000601220 CHRNA3P32297 505 aa18.43■□□□□ 0.54
CHMP2A-208ENST00000601220 SCNN1AP37088 669 aa18.43■□□□□ 0.54
CHMP2A-208ENST00000601220 RNASE9P60153 205 aaKnown RBP18.43■□□□□ 0.54
CHMP2A-208ENST00000601220 KRT83P78385 493 aa18.43■□□□□ 0.54
CHMP2A-208ENST00000601220 STAT4Q14765 748 aa18.43■□□□□ 0.54
CHMP2A-208ENST00000601220 ZNF284Q2VY69 593 aa18.43■□□□□ 0.54
CHMP2A-208ENST00000601220 PROX2Q3B8N5 592 aa18.43■□□□□ 0.54
CHMP2A-208ENST00000601220 SLC25A52Q3SY17 297 aa18.43■□□□□ 0.54
CHMP2A-208ENST00000601220 SETMARQ53H47 684 aaPredicted RBP18.43■□□□□ 0.54
CHMP2A-208ENST00000601220 TRNP1Q6NT89 227 aa18.43■□□□□ 0.54
CHMP2A-208ENST00000601220 NEK5Q6P3R8 708 aa18.43■□□□□ 0.54
CHMP2A-208ENST00000601220 SETD3Q86TU7 594 aaPredicted RBP18.43■□□□□ 0.54
CHMP2A-208ENST00000601220 XYLT1Q86Y38 959 aa18.43■□□□□ 0.54
CHMP2A-208ENST00000601220 CHST14Q8NCH0 376 aa18.43■□□□□ 0.54
CHMP2A-208ENST00000601220 BBC3Q96PG8 261 aaPredicted RBP18.43■□□□□ 0.54
CHMP2A-208ENST00000601220 TBCBQ99426 244 aa18.43■□□□□ 0.54
CHMP2A-208ENST00000601220 NAA15Q9BXJ9 866 aaKnown RBP18.43■□□□□ 0.54
CHMP2A-208ENST00000601220 NDST4Q9H3R1 872 aa18.43■□□□□ 0.54
CHMP2A-208ENST00000601220 SYNCQ9H7C4 482 aa18.43■□□□□ 0.54
CHMP2A-208ENST00000601220 MPP6Q9NZW5 540 aa18.43■□□□□ 0.54
CHMP2A-208ENST00000601220 GOLGA4Q13439 2230 aaKnown RBP18.43■□□□□ 0.54
CHMP2A-208ENST00000601220 URB1O60287 2271 aaKnown RBP18.43■□□□□ 0.54
CHMP2A-208ENST00000601220 LOC400499M0QZD8 3231 aa18.42■□□□□ 0.54
CHMP2A-208ENST00000601220 BNIP3LO60238 219 aa18.42■□□□□ 0.54
CHMP2A-208ENST00000601220 MAGEC1O60732 1142 aa18.42■□□□□ 0.54
CHMP2A-208ENST00000601220 ZMPSTE24O75844 475 aa18.42■□□□□ 0.54
CHMP2A-208ENST00000601220 F9P00740 461 aa18.42■□□□□ 0.54
CHMP2A-208ENST00000601220 RHOCP08134 193 aa18.42■□□□□ 0.54
CHMP2A-208ENST00000601220 CYP11B1P15538 503 aa18.42■□□□□ 0.54
CHMP2A-208ENST00000601220 CKMT2P17540 419 aa18.42■□□□□ 0.54
CHMP2A-208ENST00000601220 GLDCP23378 1020 aa18.42■□□□□ 0.54
CHMP2A-208ENST00000601220 FLT3P36888 993 aa18.42■□□□□ 0.54
CHMP2A-208ENST00000601220 SULT1E1P49888 294 aa18.42■□□□□ 0.54
CHMP2A-208ENST00000601220 BPIFB4P59827 614 aa18.42■□□□□ 0.54
CHMP2A-208ENST00000601220 TARDBPQ13148 414 aaKnown RBP eCLIP18.42■□□□□ 0.54
CHMP2A-208ENST00000601220 ILKQ13418 452 aa18.42■□□□□ 0.54
CHMP2A-208ENST00000601220 DRAP1Q14919 205 aaPredicted RBP18.42■□□□□ 0.54
CHMP2A-208ENST00000601220 VWA3BQ502W6 1294 aa18.42■□□□□ 0.54
CHMP2A-208ENST00000601220 HES3Q5TGS1 186 aa18.42■□□□□ 0.54
CHMP2A-208ENST00000601220 CACTIN-AS1Q8N1I8 211 aa18.42■□□□□ 0.54
CHMP2A-208ENST00000601220 DCAF4L2Q8NA75 395 aa18.42■□□□□ 0.54
CHMP2A-208ENST00000601220 ATP11CQ8NB49 1132 aa18.42■□□□□ 0.54
CHMP2A-208ENST00000601220 TMEM35BQ8NCS4 154 aa18.42■□□□□ 0.54
CHMP2A-208ENST00000601220 RFFLQ8WZ73 363 aa18.42■□□□□ 0.54
CHMP2A-208ENST00000601220 C18orf8Q96DM3 657 aa18.42■□□□□ 0.54
CHMP2A-208ENST00000601220 CRELD1Q96HD1 420 aa18.42■□□□□ 0.54
CHMP2A-208ENST00000601220 LRIG1Q96JA1 1093 aa18.42■□□□□ 0.54
CHMP2A-208ENST00000601220 C2orf49Q9BVC5 232 aaPredicted RBP18.42■□□□□ 0.54
CHMP2A-208ENST00000601220 CAAP1Q9H8G2 361 aa18.42■□□□□ 0.54
CHMP2A-208ENST00000601220 TMEM59LQ9UK28 342 aa18.42■□□□□ 0.54
CHMP2A-208ENST00000601220 STAP1Q9ULZ2 295 aa18.42■□□□□ 0.54
CHMP2A-208ENST00000601220 ZFR2Q9UPR6 939 aaKnown RBP18.42■□□□□ 0.54
CHMP2A-208ENST00000601220 FASNP49327 2511 aaKnown RBP18.42■□□□□ 0.54
CHMP2A-208ENST00000601220 A0A1W2PQU0 124 aa18.41■□□□□ 0.54
CHMP2A-208ENST00000601220 SLC31A1O15431 190 aa18.41■□□□□ 0.54
CHMP2A-208ENST00000601220 SDC3O75056 442 aa18.41■□□□□ 0.54
CHMP2A-208ENST00000601220 GIMD1P0DJR0 217 aa18.41■□□□□ 0.54
CHMP2A-208ENST00000601220 ACP1P24666 158 aa18.41■□□□□ 0.54
CHMP2A-208ENST00000601220 CLCN6P51797 869 aa18.41■□□□□ 0.54
CHMP2A-208ENST00000601220 DEUP1Q05D60 604 aa18.41■□□□□ 0.54
CHMP2A-208ENST00000601220 RTP5Q14D33 572 aa18.41■□□□□ 0.54
CHMP2A-208ENST00000601220 ACAP1Q15027 740 aa18.41■□□□□ 0.54
CHMP2A-208ENST00000601220 KLHDC7AQ5VTJ3 777 aa18.41■□□□□ 0.54
CHMP2A-208ENST00000601220 LINGO4Q6UY18 593 aa18.41■□□□□ 0.54
CHMP2A-208ENST00000601220 HORMAD1Q86X24 394 aa18.41■□□□□ 0.54
CHMP2A-208ENST00000601220 KLK6Q92876 244 aa18.41■□□□□ 0.54
CHMP2A-208ENST00000601220 KLHDC7BQ96G42 594 aa18.41■□□□□ 0.54
CHMP2A-208ENST00000601220 HDAC8Q9BY41 377 aa18.41■□□□□ 0.54
CHMP2A-208ENST00000601220 FHOD1Q9Y613 1164 aa18.41■□□□□ 0.54
CHMP2A-208ENST00000601220 TP53BP1Q12888 1972 aaPredicted RBP18.41■□□□□ 0.54
CHMP2A-208ENST00000601220 KNTC1P50748 2209 aa18.4■□□□□ 0.54
CHMP2A-208ENST00000601220 ARID1BQ8NFD5 2236 aaPredicted RBP18.4■□□□□ 0.54
CHMP2A-208ENST00000601220 KPNA3O00505 521 aaPredicted RBP18.4■□□□□ 0.54
CHMP2A-208ENST00000601220 SIGLEC6O43699 453 aa18.4■□□□□ 0.54
CHMP2A-208ENST00000601220 TLX3O43711 291 aaPredicted RBP18.4■□□□□ 0.54
CHMP2A-208ENST00000601220 THEGLP0DJG4 465 aa18.4■□□□□ 0.54
CHMP2A-208ENST00000601220 PRLRP16471 622 aa18.4■□□□□ 0.54
CHMP2A-208ENST00000601220 HNF1BP35680 557 aa18.4■□□□□ 0.54
CHMP2A-208ENST00000601220 ZNF211Q13398 564 aaPredicted RBP18.4■□□□□ 0.54
CHMP2A-208ENST00000601220 C2CD6Q53TS8 623 aa18.4■□□□□ 0.54
CHMP2A-208ENST00000601220 ARSIQ5FYB1 569 aa18.4■□□□□ 0.54
CHMP2A-208ENST00000601220 FAM102AQ5T9C2 384 aaPredicted RBP18.4■□□□□ 0.54
CHMP2A-208ENST00000601220 DPY19L3Q6ZPD9 716 aa18.4■□□□□ 0.54
CHMP2A-208ENST00000601220 TFAP2DQ7Z6R9 452 aa18.4■□□□□ 0.54
CHMP2A-208ENST00000601220 OR7D4Q8NG98 312 aa18.4■□□□□ 0.54
CHMP2A-208ENST00000601220 HAPLN3Q96S86 360 aa18.4■□□□□ 0.54
CHMP2A-208ENST00000601220 TUBGCP2Q9BSJ2 902 aa18.4■□□□□ 0.54
CHMP2A-208ENST00000601220 NRSN2Q9GZP1 204 aa18.4■□□□□ 0.54
CHMP2A-208ENST00000601220 KLHL11Q9NVR0 708 aa18.4■□□□□ 0.54
CHMP2A-208ENST00000601220 TMEM51Q9NW97 253 aa18.4■□□□□ 0.54
CHMP2A-208ENST00000601220 UCKL1Q9NWZ5 548 aa18.4■□□□□ 0.54
CHMP2A-208ENST00000601220 WASF2Q9Y6W5 498 aa18.4■□□□□ 0.54
CHMP2A-208ENST00000601220 FAM170AA1A519 330 aa18.39■□□□□ 0.53
CHMP2A-208ENST00000601220 ILVBLA1L0T0 632 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms