RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 GSC2O15499 205 aa11.74□□□□□ -0.53
ARHGEF1-220ENST00000600274 CCR1P32246 355 aa11.74□□□□□ -0.53
ARHGEF1-220ENST00000600274 SCNN1AP37088 669 aa11.74□□□□□ -0.53
ARHGEF1-220ENST00000600274 SLC12A2P55011 1212 aa11.74□□□□□ -0.53
ARHGEF1-220ENST00000600274 RBM15BQ8NDT2 890 aaKnown RBP11.74□□□□□ -0.53
ARHGEF1-220ENST00000600274 GIPC2Q8TF65 315 aa11.74□□□□□ -0.53
ARHGEF1-220ENST00000600274 VPS39Q96JC1 886 aa11.74□□□□□ -0.53
ARHGEF1-220ENST00000600274 THAP1Q9NVV9 213 aa11.74□□□□□ -0.53
ARHGEF1-220ENST00000600274 PTCH2Q9Y6C5 1203 aa11.74□□□□□ -0.53
ARHGEF1-220ENST00000600274 SEPT4O43236 478 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 DCXO43602 365 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 DDHD2O94830 711 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 PPIDQ08752 370 aaKnown RBP11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 FAM171A1Q5VUB5 890 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 FAM219BQ5XKK7 198 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 MARK2Q7KZI7 788 aaKnown RBP11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 SHKBP1Q8TBC3 707 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 PIWIL2Q8TC59 973 aaKnown RBP11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 URGCPQ8TCY9 931 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 NT5C3BQ969T7 300 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 ELMO2Q96JJ3 720 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 BRD8Q9H0E9 1235 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 GBA3Q9H227 469 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 RUVBL2Q9Y230 463 aaKnown RBP11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 HHLA1C9JL84 531 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 AOC2O75106 756 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 CYBAP13498 195 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 CALB2P22676 271 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 CA8P35219 290 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 SKIV2L2P42285 1042 aaKnown RBP11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 MAGEA6P43360 314 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 OCRLQ01968 901 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 NIPAL4Q0D2K0 466 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 CDH17Q12864 832 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 PCLAFQ15004 111 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 PDCD2Q16342 344 aaPredicted RBP11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 SPANXN3Q5MJ09 141 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 C10orf120Q5SQS8 335 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 C1orf146Q5VVC0 180 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 ZNF470Q6ECI4 717 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 RPS27LQ71UM5 84 aaKnown RBP11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 SKA1Q96BD8 255 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 TEKT5Q96M29 485 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 WDR55Q9H6Y2 383 aaPredicted RBP11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 SIRPGQ9P1W8 387 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 IGSF9Q9P2J2 1179 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 TSR3Q9UJK0 312 aaKnown RBP11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 A0A0U1RQF3 1178 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 CFLARO15519 480 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 PEX11AO75192 247 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 CHRNGP07510 517 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 MLNP12872 115 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 SERPINB5P36952 375 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 NAGLUP54802 743 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 CTC1Q2NKJ3 1217 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 RAP1GAP2Q684P5 730 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 NAPEPLDQ6IQ20 393 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 PTAR1Q7Z6K3 402 aaPredicted RBP11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 CFAP52Q8N1V2 620 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 ZNF781Q8N8C0 355 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 ZSCAN18Q8TBC5 510 aaPredicted RBP11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 DNAJC9Q8WXX5 260 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 INPP5DQ92835 1189 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 CPNE1Q99829 537 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 ACBD6Q9BR61 282 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 RNPEPL1Q9HAU8 725 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 GMIPQ9P107 970 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 COPG2Q9UBF2 871 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 DCDC2Q9UHG0 476 aa11.73□□□□□ -0.53
ARHGEF1-220ENST00000600274 hCG_2014768A0A024R1R8 64 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 LUC7L3O95232 432 aaKnown RBP11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 PRKCGP05129 697 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 TSPAN8P19075 237 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 RPL9P32969 192 aaKnown RBP11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 SERPINB8P50452 374 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 PAPOLAP51003 745 aaKnown RBP11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 USP46P62068 366 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 CUL3Q13618 768 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 ZRSR2Q15696 482 aaKnown RBP11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 CTXN3Q4LDR2 81 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 TEDDM1Q5T9Z0 273 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 NAT9Q9BTE0 207 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 SPON2Q9BUD6 331 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 RNF186Q9NXI6 227 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 KCNK4Q9NYG8 393 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 IPO11Q9UI26 975 aaKnown RBP11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 ZNF638Q14966 1978 aaKnown RBP11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 DPPA5A6NC42 116 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 AURKAO14965 403 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 GJB3O75712 270 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 CIB2O75838 187 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 CNTN5O94779 1100 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 FGF3P11487 239 aaPredicted RBP11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 MSX2P35548 267 aaPredicted RBP11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 CAP1Q01518 475 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 HSF5Q4G112 596 aaPredicted RBP11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 FAM117BQ6P1L5 589 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 KYAT3Q6YP21 454 aaKnown RBP11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 ARCQ7LC44 396 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 RNF148Q8N7C7 305 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms