RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 CTSLP07711 333 aa24.51■■□□□ 1.51
LSM4-202ENST00000593564 TFE3P19532 575 aaPredicted RBP24.51■■□□□ 1.51
LSM4-202ENST00000593564 CDH5P33151 784 aaPredicted RBP24.51■■□□□ 1.51
LSM4-202ENST00000593564 SCNN1AP37088 669 aa24.51■■□□□ 1.51
LSM4-202ENST00000593564 SULT1E1P49888 294 aa24.51■■□□□ 1.51
LSM4-202ENST00000593564 SOWAHCQ53LP3 525 aaPredicted RBP24.51■■□□□ 1.51
LSM4-202ENST00000593564 ACBD5Q5T8D3 534 aaPredicted RBP24.51■■□□□ 1.51
LSM4-202ENST00000593564 PIP5KL1Q5T9C9 394 aa24.51■■□□□ 1.51
LSM4-202ENST00000593564 DPY19L2P1Q6NXN4 242 aa24.51■■□□□ 1.51
LSM4-202ENST00000593564 NEK5Q6P3R8 708 aa24.51■■□□□ 1.51
LSM4-202ENST00000593564 DCAF4L2Q8NA75 395 aa24.51■■□□□ 1.51
LSM4-202ENST00000593564 ATP11CQ8NB49 1132 aa24.51■■□□□ 1.51
LSM4-202ENST00000593564 TMEM145Q8NBT3 493 aa24.51■■□□□ 1.51
LSM4-202ENST00000593564 OR2A12Q8NGT7 310 aa24.51■■□□□ 1.51
LSM4-202ENST00000593564 PAXBP1Q9Y5B6 917 aa24.51■■□□□ 1.51
LSM4-202ENST00000593564 ARID1BQ8NFD5 2236 aaPredicted RBP24.51■■□□□ 1.51
LSM4-202ENST00000593564 SMG1Q96Q15 3661 aaKnown RBP24.5■■□□□ 1.51
LSM4-202ENST00000593564 CHRNA3P32297 505 aa24.5■■□□□ 1.51
LSM4-202ENST00000593564 GABRB2P47870 512 aa24.5■■□□□ 1.51
LSM4-202ENST00000593564 CLCN6P51797 869 aa24.5■■□□□ 1.51
LSM4-202ENST00000593564 CLDN6P56747 220 aa24.5■■□□□ 1.51
LSM4-202ENST00000593564 RNASE9P60153 205 aaKnown RBP24.5■■□□□ 1.51
LSM4-202ENST00000593564 CCDC15Q0P6D6 951 aa24.5■■□□□ 1.51
LSM4-202ENST00000593564 TPD52L1Q16890 204 aaPredicted RBP24.5■■□□□ 1.51
LSM4-202ENST00000593564 C6orf118Q5T5N4 469 aa24.5■■□□□ 1.51
LSM4-202ENST00000593564 HES3Q5TGS1 186 aa24.5■■□□□ 1.51
LSM4-202ENST00000593564 FBXL19Q6PCT2 694 aa24.5■■□□□ 1.51
LSM4-202ENST00000593564 FAM114A1Q8IWE2 563 aa24.5■■□□□ 1.51
LSM4-202ENST00000593564 TMIEQ8NEW7 156 aa24.5■■□□□ 1.51
LSM4-202ENST00000593564 KLHDC7BQ96G42 594 aa24.5■■□□□ 1.51
LSM4-202ENST00000593564 LRIG1Q96JA1 1093 aa24.5■■□□□ 1.51
LSM4-202ENST00000593564 C1orf74Q96LT6 269 aa24.5■■□□□ 1.51
LSM4-202ENST00000593564 NDST4Q9H3R1 872 aa24.5■■□□□ 1.51
LSM4-202ENST00000593564 CA5BQ9Y2D0 317 aa24.5■■□□□ 1.51
LSM4-202ENST00000593564 SNX10Q9Y5X0 201 aa24.5■■□□□ 1.51
LSM4-202ENST00000593564 K7ERQ8 282 aa24.49■■□□□ 1.51
LSM4-202ENST00000593564 CKMT2P17540 419 aa24.49■■□□□ 1.51
LSM4-202ENST00000593564 DEUP1Q05D60 604 aa24.49■■□□□ 1.51
LSM4-202ENST00000593564 SLC25A52Q3SY17 297 aa24.49■■□□□ 1.51
LSM4-202ENST00000593564 LRRC31Q6UY01 552 aa24.49■■□□□ 1.51
LSM4-202ENST00000593564 TBCBQ99426 244 aa24.49■■□□□ 1.51
LSM4-202ENST00000593564 PDCL3Q9H2J4 239 aa24.49■■□□□ 1.51
LSM4-202ENST00000593564 IGLV3-10A0A075B6K4 115 aa24.48■■□□□ 1.51
LSM4-202ENST00000593564 A0A1W2PQU0 124 aa24.48■■□□□ 1.51
LSM4-202ENST00000593564 KPNA3O00505 521 aaPredicted RBP24.48■■□□□ 1.51
LSM4-202ENST00000593564 PRNPP04156 253 aa24.48■■□□□ 1.51
LSM4-202ENST00000593564 CYP11B1P15538 503 aa24.48■■□□□ 1.51
LSM4-202ENST00000593564 RRM1P23921 792 aa24.48■■□□□ 1.51
LSM4-202ENST00000593564 TARDBPQ13148 414 aaKnown RBP eCLIP24.48■■□□□ 1.51
LSM4-202ENST00000593564 VWA3BQ502W6 1294 aa24.48■■□□□ 1.51
LSM4-202ENST00000593564 MIIPQ5JXC2 388 aa24.48■■□□□ 1.51
LSM4-202ENST00000593564 FAM102AQ5T9C2 384 aaPredicted RBP24.48■■□□□ 1.51
LSM4-202ENST00000593564 ARRDC3Q96B67 414 aa24.48■■□□□ 1.51
LSM4-202ENST00000593564 C18orf8Q96DM3 657 aa24.48■■□□□ 1.51
LSM4-202ENST00000593564 A0A0D9SEW6 157 aa24.47■■□□□ 1.51
LSM4-202ENST00000593564 SMAD6O43541 496 aaKnown RBP24.47■■□□□ 1.51
LSM4-202ENST00000593564 PRLRP16471 622 aa24.47■■□□□ 1.51
LSM4-202ENST00000593564 RAPGEF1Q13905 1077 aa24.47■■□□□ 1.51
LSM4-202ENST00000593564 DRAP1Q14919 205 aaPredicted RBP24.47■■□□□ 1.51
LSM4-202ENST00000593564 ZNF284Q2VY69 593 aa24.47■■□□□ 1.51
LSM4-202ENST00000593564 PROX2Q3B8N5 592 aa24.47■■□□□ 1.51
LSM4-202ENST00000593564 TFAP2DQ7Z6R9 452 aa24.47■■□□□ 1.51
LSM4-202ENST00000593564 HORMAD1Q86X24 394 aa24.47■■□□□ 1.51
LSM4-202ENST00000593564 XYLT1Q86Y38 959 aa24.47■■□□□ 1.51
LSM4-202ENST00000593564 RFFLQ8WZ73 363 aa24.47■■□□□ 1.51
LSM4-202ENST00000593564 NRSN2Q9GZP1 204 aa24.47■■□□□ 1.51
LSM4-202ENST00000593564 DYRK4Q9NR20 520 aa24.47■■□□□ 1.51
LSM4-202ENST00000593564 KLHL11Q9NVR0 708 aa24.47■■□□□ 1.51
LSM4-202ENST00000593564 MPP6Q9NZW5 540 aa24.47■■□□□ 1.51
LSM4-202ENST00000593564 DOCK9Q9BZ29 2069 aa24.46■■□□□ 1.51
LSM4-202ENST00000593564 SLC31A1O15431 190 aa24.46■■□□□ 1.51
LSM4-202ENST00000593564 SDC3O75056 442 aa24.46■■□□□ 1.51
LSM4-202ENST00000593564 THEGLP0DJG4 465 aa24.46■■□□□ 1.51
LSM4-202ENST00000593564 PRKCSHP14314 528 aaPredicted RBP24.46■■□□□ 1.51
LSM4-202ENST00000593564 ACP1P24666 158 aa24.46■■□□□ 1.51
LSM4-202ENST00000593564 ARTNQ5T4W7 220 aa24.46■■□□□ 1.51
LSM4-202ENST00000593564 C22orf39Q6P5X5 142 aa24.46■■□□□ 1.51
LSM4-202ENST00000593564 LINGO4Q6UY18 593 aa24.46■■□□□ 1.51
LSM4-202ENST00000593564 ZNF783Q6ZMS7 281 aa24.46■■□□□ 1.51
LSM4-202ENST00000593564 ERICH1Q86X53 443 aa24.46■■□□□ 1.51
LSM4-202ENST00000593564 CACTIN-AS1Q8N1I8 211 aa24.46■■□□□ 1.51
LSM4-202ENST00000593564 CHST14Q8NCH0 376 aa24.46■■□□□ 1.51
LSM4-202ENST00000593564 TUBGCP2Q9BSJ2 902 aa24.46■■□□□ 1.51
LSM4-202ENST00000593564 HDAC8Q9BY41 377 aa24.46■■□□□ 1.51
LSM4-202ENST00000593564 TMPRSS4Q9NRS4 437 aa24.46■■□□□ 1.51
LSM4-202ENST00000593564 FHOD1Q9Y613 1164 aa24.46■■□□□ 1.51
LSM4-202ENST00000593564 ASXL3Q9C0F0 2248 aa24.45■■□□□ 1.5
LSM4-202ENST00000593564 ILVBLA1L0T0 632 aa24.45■■□□□ 1.5
LSM4-202ENST00000593564 LSM8O95777 96 aaKnown RBP24.45■■□□□ 1.5
LSM4-202ENST00000593564 HNRNPA2B1P22626 353 aaKnown RBP24.45■■□□□ 1.5
LSM4-202ENST00000593564 OR1E1P30953 314 aa24.45■■□□□ 1.5
LSM4-202ENST00000593564 AKT2P31751 481 aa24.45■■□□□ 1.5
LSM4-202ENST00000593564 FLT3P36888 993 aa24.45■■□□□ 1.5
LSM4-202ENST00000593564 KCNMA1Q12791 1236 aa24.45■■□□□ 1.5
LSM4-202ENST00000593564 ZNF211Q13398 564 aaPredicted RBP24.45■■□□□ 1.5
LSM4-202ENST00000593564 RTP5Q14D33 572 aa24.45■■□□□ 1.5
LSM4-202ENST00000593564 KLHDC7AQ5VTJ3 777 aa24.45■■□□□ 1.5
LSM4-202ENST00000593564 ERN2Q76MJ5 926 aaKnown RBP24.45■■□□□ 1.5
LSM4-202ENST00000593564 BNIPLQ7Z465 357 aa24.45■■□□□ 1.5
LSM4-202ENST00000593564 SLC25A45Q8N413 288 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms