RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 LRRC45Q96CN5 670 aa11.54□□□□□ -0.56
VMP1-207ENST00000588131 TEKT5Q96M29 485 aa11.54□□□□□ -0.56
VMP1-207ENST00000588131 AGAP3Q96P47 875 aa11.54□□□□□ -0.56
VMP1-207ENST00000588131 IL12RB2Q99665 862 aa11.54□□□□□ -0.56
VMP1-207ENST00000588131 FERMT1Q9BQL6 677 aa11.54□□□□□ -0.56
VMP1-207ENST00000588131 FAM83CQ9BQN1 747 aa11.54□□□□□ -0.56
VMP1-207ENST00000588131 GORASP1Q9BQQ3 440 aa11.54□□□□□ -0.56
VMP1-207ENST00000588131 FEM1AQ9BSK4 669 aa11.54□□□□□ -0.56
VMP1-207ENST00000588131 EBF3Q9H4W6 596 aa11.54□□□□□ -0.56
VMP1-207ENST00000588131 HPS4Q9NQG7 708 aa11.54□□□□□ -0.56
VMP1-207ENST00000588131 RAB6BQ9NRW1 208 aa11.54□□□□□ -0.56
VMP1-207ENST00000588131 KLHL8Q9P2G9 620 aaPredicted RBP11.54□□□□□ -0.56
VMP1-207ENST00000588131 EPS15L1Q9UBC2 864 aa11.54□□□□□ -0.56
VMP1-207ENST00000588131 TPX2Q9ULW0 747 aaKnown RBP11.54□□□□□ -0.56
VMP1-207ENST00000588131 OTOL1A6NHN0 477 aaPredicted RBP11.53□□□□□ -0.56
VMP1-207ENST00000588131 CBX4O00257 560 aa11.53□□□□□ -0.56
VMP1-207ENST00000588131 HOXC11O43248 304 aaPredicted RBP11.53□□□□□ -0.56
VMP1-207ENST00000588131 OPHN1O60890 802 aa11.53□□□□□ -0.56
VMP1-207ENST00000588131 ECI2O75521 394 aa11.53□□□□□ -0.56
VMP1-207ENST00000588131 ZNF189O75820 626 aaPredicted RBP11.53□□□□□ -0.56
VMP1-207ENST00000588131 ZMPSTE24O75844 475 aa11.53□□□□□ -0.56
VMP1-207ENST00000588131 HLA-DQB2P05538 268 aa11.53□□□□□ -0.56
VMP1-207ENST00000588131 TUBBP07437 444 aa11.53□□□□□ -0.56
VMP1-207ENST00000588131 ADH5P11766 374 aa11.53□□□□□ -0.56
VMP1-207ENST00000588131 H2AFXP16104 143 aaPredicted RBP11.53□□□□□ -0.56
VMP1-207ENST00000588131 ITIH2P19823 946 aa11.53□□□□□ -0.56
VMP1-207ENST00000588131 NFKB1P19838 968 aa11.53□□□□□ -0.56
VMP1-207ENST00000588131 MCM3P25205 808 aa11.53□□□□□ -0.56
VMP1-207ENST00000588131 PSMB4P28070 264 aa11.53□□□□□ -0.56
VMP1-207ENST00000588131 HLA-FP30511 346 aa11.53□□□□□ -0.56
VMP1-207ENST00000588131 ACTN2P35609 894 aa11.53□□□□□ -0.56
VMP1-207ENST00000588131 PLTPP55058 493 aa11.53□□□□□ -0.56
VMP1-207ENST00000588131 BASP1P80723 227 aaKnown RBP11.53□□□□□ -0.56
VMP1-207ENST00000588131 GAD2Q05329 585 aa11.53□□□□□ -0.56
VMP1-207ENST00000588131 TNK2Q07912 1038 aa11.53□□□□□ -0.56
VMP1-207ENST00000588131 GAB4Q2WGN9 574 aa11.53□□□□□ -0.56
VMP1-207ENST00000588131 SYCP2LQ5T4T6 812 aa11.53□□□□□ -0.56
VMP1-207ENST00000588131 RNASEH2BQ5TBB1 312 aaKnown RBP11.53□□□□□ -0.56
VMP1-207ENST00000588131 HIBCHQ6NVY1 386 aaPredicted RBP11.53□□□□□ -0.56
VMP1-207ENST00000588131 FBXO38Q6PIJ6 1188 aa11.53□□□□□ -0.56
VMP1-207ENST00000588131 PID1Q7Z2X4 250 aa11.53□□□□□ -0.56
VMP1-207ENST00000588131 C12orf40Q86WS4 652 aa11.53□□□□□ -0.56
VMP1-207ENST00000588131 CCDC117Q8IWD4 279 aaPredicted RBP11.53□□□□□ -0.56
VMP1-207ENST00000588131 PLCD3Q8N3E9 789 aa11.53□□□□□ -0.56
VMP1-207ENST00000588131 NAT16Q8N8M0 369 aa11.53□□□□□ -0.56
VMP1-207ENST00000588131 FBXO25Q8TCJ0 367 aa11.53□□□□□ -0.56
VMP1-207ENST00000588131 E2F7Q96AV8 911 aa11.53□□□□□ -0.56
VMP1-207ENST00000588131 VAT1Q99536 393 aa11.53□□□□□ -0.56
VMP1-207ENST00000588131 ETNK1Q9HBU6 452 aa11.53□□□□□ -0.56
VMP1-207ENST00000588131 ABCB8Q9NUT2 735 aa11.53□□□□□ -0.56
VMP1-207ENST00000588131 RBM22Q9NW64 420 aaKnown RBP eCLIP11.53□□□□□ -0.56
VMP1-207ENST00000588131 THG1LQ9NWX6 298 aaKnown RBP11.53□□□□□ -0.56
VMP1-207ENST00000588131 KIAA1522Q9P206 1035 aaPredicted RBP11.53□□□□□ -0.56
VMP1-207ENST00000588131 IGSF9Q9P2J2 1179 aa11.53□□□□□ -0.56
VMP1-207ENST00000588131 ANAPC5Q9UJX4 755 aa11.53□□□□□ -0.56
VMP1-207ENST00000588131 VPS28Q9UK41 221 aa11.53□□□□□ -0.56
VMP1-207ENST00000588131 INTS6Q9UL03 887 aaKnown RBP11.53□□□□□ -0.56
VMP1-207ENST00000588131 NUMBLQ9Y6R0 609 aa11.53□□□□□ -0.56
VMP1-207ENST00000588131 MYOFQ9NZM1 2061 aa11.53□□□□□ -0.56
VMP1-207ENST00000588131 REV3LO60673 3130 aa11.52□□□□□ -0.56
VMP1-207ENST00000588131 C2CD4DB7Z1M9 353 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 MUSKO15146 869 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 TRIM24O15164 1050 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 TMEM63AO94886 807 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 NFATC1O95644 943 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 CD160O95971 181 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 ADH1CP00326 375 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 FAM153BP0C7A2 387 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 PSMC3P17980 439 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 ETFBP38117 255 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 PLK1P53350 603 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 CALCOCO2Q13137 446 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 SEMA5AQ13591 1074 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 HTR4Q13639 388 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 HNRNPDQ14103 355 aaKnown RBP11.52□□□□□ -0.57
VMP1-207ENST00000588131 KCNJ11Q14654 390 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 LBRQ14739 615 aaKnown RBP11.52□□□□□ -0.57
VMP1-207ENST00000588131 BRD3Q15059 726 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 PDGFRLQ15198 375 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 PARP6Q2NL67 630 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 PLEKHG6Q3KR16 790 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 FAM153CQ494X1 144 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 FUT11Q495W5 492 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 PITRM1Q5JRX3 1037 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 TMCO4Q5TGY1 634 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 LINGO4Q6UY18 593 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 C4orf22Q6V702 233 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 OTOP3Q7RTS5 596 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 PPIL6Q8IXY8 311 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 YAF2Q8IY57 180 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 PGBD5Q8N414 524 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 TEX26Q8N6G2 289 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 NAT8LQ8N9F0 302 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 EIF1ADQ8N9N8 165 aaKnown RBP11.52□□□□□ -0.57
VMP1-207ENST00000588131 DCAF4L2Q8NA75 395 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 BBOF1Q8ND07 529 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 TTC8Q8TAM2 541 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 AENQ8WTP8 325 aaKnown RBP11.52□□□□□ -0.57
VMP1-207ENST00000588131 ANKRD7Q92527 254 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 PRCCQ92733 491 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms