RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 C1QTNF3-AMACRE9PGA6 284 aa12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 DCLK1O15075 740 aa12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 ALOX15BO15296 676 aa12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 KDELR3O43731 214 aa12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 SIN3BO75182 1162 aa12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 RPP40O75818 363 aaKnown RBP12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 DNTTP04053 509 aa12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 CD48P09326 243 aa12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 SRCP12931 536 aa12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 ZFXP17010 805 aaPredicted RBP12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 GABRG2P18507 467 aa12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 AMPD1P23109 780 aa12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 GLDCP23378 1020 aa12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 DNA2P51530 1060 aa12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 ARF5P84085 180 aa12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 ZBTB16Q05516 673 aa12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 MMRN1Q13201 1228 aa12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 DLG2Q15700 870 aa12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 ANKRD20A8PQ5CZ79 823 aa12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 ARTNQ5T4W7 220 aa12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 Q6ZVU0 165 aa12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 PEX26Q7Z412 305 aa12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 TMPRSS6Q8IU80 811 aa12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 BBS5Q8N3I7 341 aa12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 PCDH20Q8N6Y1 951 aaKnown RBP12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 NPWQ8N729 165 aa12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 UBL4BQ8N7F7 174 aa12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 ZBTB44Q8NCP5 570 aa12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 FAM71BQ8TC56 605 aa12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 GAB3Q8WWW8 586 aa12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 TSC1Q92574 1164 aa12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 MYO19Q96H55 970 aa12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 MRGPRX1Q96LB2 322 aa12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 SEMA4AQ9H3S1 761 aa12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 LRRC19Q9H756 370 aa12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 PRSS16Q9NQE7 514 aa12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 SLCO3A1Q9UIG8 710 aa12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 SALL4Q9UJQ4 1053 aa12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 AMFRQ9UKV5 643 aa12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 GUCA1BQ9UMX6 200 aa12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 SCML1Q9UN30 329 aa12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 DUSP10Q9Y6W6 482 aa12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 R4GN57 208 aa12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 CHD5Q8TDI0 1954 aa12.12□□□□□ -0.47
SDHDP1-201ENST00000588055 GRID2IPA4D2P6 1211 aa12.11□□□□□ -0.47
SDHDP1-201ENST00000588055 MIF4GDA9UHW6 222 aaKnown RBP12.11□□□□□ -0.47
SDHDP1-201ENST00000588055 APOL1O14791 398 aa12.11□□□□□ -0.47
SDHDP1-201ENST00000588055 PALMO75781 387 aa12.11□□□□□ -0.47
SDHDP1-201ENST00000588055 NEBLO76041 1014 aa12.11□□□□□ -0.47
SDHDP1-201ENST00000588055 ZRANB2O95218 330 aaKnown RBP eCLIP12.11□□□□□ -0.47
SDHDP1-201ENST00000588055 IGSF6O95976 241 aa12.11□□□□□ -0.47
SDHDP1-201ENST00000588055 ADH1BP00325 375 aa12.11□□□□□ -0.47
SDHDP1-201ENST00000588055 MX2P20592 715 aa12.11□□□□□ -0.47
SDHDP1-201ENST00000588055 KDELR1P24390 212 aa12.11□□□□□ -0.47
SDHDP1-201ENST00000588055 CTNNA1P35221 906 aaKnown RBP12.11□□□□□ -0.47
SDHDP1-201ENST00000588055 PSMD8P48556 350 aa12.11□□□□□ -0.47
SDHDP1-201ENST00000588055 PAPOLAP51003 745 aaKnown RBP12.11□□□□□ -0.47
SDHDP1-201ENST00000588055 ARSEP51690 589 aa12.11□□□□□ -0.47
SDHDP1-201ENST00000588055 RHOAP61586 193 aa12.11□□□□□ -0.47
SDHDP1-201ENST00000588055 SNRPD1P62314 119 aaKnown RBP12.11□□□□□ -0.47
SDHDP1-201ENST00000588055 DMWDQ09019 674 aa12.11□□□□□ -0.47
SDHDP1-201ENST00000588055 TFDP2Q14188 446 aa12.11□□□□□ -0.47
SDHDP1-201ENST00000588055 ELF2Q15723 593 aa12.11□□□□□ -0.47
SDHDP1-201ENST00000588055 ATP13A4Q4VNC1 1196 aa12.11□□□□□ -0.47
SDHDP1-201ENST00000588055 INO80DQ53TQ3 878 aaPredicted RBP12.11□□□□□ -0.47
SDHDP1-201ENST00000588055 FAM46CQ5VWP2 391 aa12.11□□□□□ -0.47
SDHDP1-201ENST00000588055 PRR23BQ6ZRT6 265 aa12.11□□□□□ -0.47
SDHDP1-201ENST00000588055 RFX6Q8HWS3 928 aa12.11□□□□□ -0.47
SDHDP1-201ENST00000588055 LRRC49Q8IUZ0 686 aa12.11□□□□□ -0.47
SDHDP1-201ENST00000588055 KATNAL2Q8IYT4 538 aa12.11□□□□□ -0.47
SDHDP1-201ENST00000588055 RYBPQ8N488 228 aaPredicted RBP12.11□□□□□ -0.47
SDHDP1-201ENST00000588055 GANCQ8TET4 914 aa12.11□□□□□ -0.47
SDHDP1-201ENST00000588055 RAPGEF5Q92565 580 aa12.11□□□□□ -0.47
SDHDP1-201ENST00000588055 NELL1Q92832 810 aa12.11□□□□□ -0.47
SDHDP1-201ENST00000588055 FAF2Q96CS3 445 aa12.11□□□□□ -0.47
SDHDP1-201ENST00000588055 PPP1R16AQ96I34 528 aa12.11□□□□□ -0.47
SDHDP1-201ENST00000588055 PDLIM2Q96JY6 352 aa12.11□□□□□ -0.47
SDHDP1-201ENST00000588055 MKRN2Q9H000 416 aaKnown RBP12.11□□□□□ -0.47
SDHDP1-201ENST00000588055 NOL6Q9H6R4 1146 aaKnown RBP12.11□□□□□ -0.47
SDHDP1-201ENST00000588055 LZTFL1Q9NQ48 299 aa12.11□□□□□ -0.47
SDHDP1-201ENST00000588055 DYRK4Q9NR20 520 aa12.11□□□□□ -0.47
SDHDP1-201ENST00000588055 FAM86C1Q9NVL1 165 aa12.11□□□□□ -0.47
SDHDP1-201ENST00000588055 TRIM10Q9UDY6 481 aa12.11□□□□□ -0.47
SDHDP1-201ENST00000588055 NCKAP1Q9Y2A7 1128 aa12.11□□□□□ -0.47
SDHDP1-201ENST00000588055 PPP2R2CQ9Y2T4 447 aa12.11□□□□□ -0.47
SDHDP1-201ENST00000588055 FCF1Q9Y324 198 aaKnown RBP12.11□□□□□ -0.47
SDHDP1-201ENST00000588055 MUC6Q6W4X9 2439 aa12.11□□□□□ -0.47
SDHDP1-201ENST00000588055 MAP3K13O43283 966 aa12.1□□□□□ -0.47
SDHDP1-201ENST00000588055 ZSCAN12O43309 604 aa12.1□□□□□ -0.47
SDHDP1-201ENST00000588055 MFSD11O43934 449 aa12.1□□□□□ -0.47
SDHDP1-201ENST00000588055 PRAMEF11O60813 436 aa12.1□□□□□ -0.47
SDHDP1-201ENST00000588055 NDUFS2O75306 463 aa12.1□□□□□ -0.47
SDHDP1-201ENST00000588055 ZMPSTE24O75844 475 aa12.1□□□□□ -0.47
SDHDP1-201ENST00000588055 TMCC1O94876 653 aa12.1□□□□□ -0.47
SDHDP1-201ENST00000588055 MT-CO1P00395 513 aa12.1□□□□□ -0.47
SDHDP1-201ENST00000588055 IL1BP01584 269 aa12.1□□□□□ -0.47
SDHDP1-201ENST00000588055 PRNPP04156 253 aa12.1□□□□□ -0.47
SDHDP1-201ENST00000588055 OXTRP30559 389 aa12.1□□□□□ -0.47
SDHDP1-201ENST00000588055 NBL1P41271 181 aa12.1□□□□□ -0.47
SDHDP1-201ENST00000588055 COPAP53621 1224 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms