RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 PIN4Q9Y237 131 aaKnown RBP14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 ANKRD6Q9Y2G4 727 aa14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 GOLGA8QA0A0J9YX86 632 aa14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 GOLGA8OA6NCC3 632 aa14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 C9IYK1 514 aa14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 GOLGA8NF8WBI6 632 aa14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 TK2O00142 265 aa14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 SBK3P0C264 359 aa14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 NFKB1P19838 968 aa14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 NUDT2P50583 147 aa14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 GJA9P57773 515 aa14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 GALNT2Q10471 571 aa14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 ANO4Q32M45 955 aa14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 CNPY1Q3B7I2 92 aa14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 LSM12Q3MHD2 195 aaKnown RBP14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 SEL1L3Q68CR1 1132 aa14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 SDCCAG8Q86SQ7 713 aaPredicted RBP14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 OR6J1Q8NGC5 347 aa14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 RP9Q8TA86 221 aaKnown RBP14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 NCSTNQ92542 709 aa14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 VAT1Q99536 393 aa14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 APOL2Q9BQE5 337 aa14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 TASP1Q9H6P5 420 aa14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 C6orf203Q9P0P8 240 aaPredicted RBP14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 SLC39A10Q9ULF5 831 aa14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 MAGED2Q9UNF1 606 aaPredicted RBP14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 PSMD13Q9UNM6 376 aa14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 PLXNB2O15031 1838 aa14.45□□□□□ -0.1
CDK5RAP3-237ENST00000585163 SMIM35A0A1B0GVV1 85 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 YJEFN3A6XGL0 299 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 AIM2O14862 343 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 SLC22A2O15244 555 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 FBXO21O94952 628 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 YY1P25490 414 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 NMBRP28336 390 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 GRIA4P48058 902 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 PRKAA2P54646 552 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 MAP3K7CLP57077 242 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 GRM3Q14832 879 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 C16orf89Q6UX73 402 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 ARMCX6Q7L4S7 300 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 ZC3HC1Q86WB0 502 aaKnown RBP14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 SNX32Q86XE0 403 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 CPSF7Q8N684 471 aaKnown RBP14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 KYQ8NBH2 561 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 TMEM40Q8WWA1 233 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 STON2Q8WXE9 905 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 MOCOSQ96EN8 888 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 CDCA5Q96FF9 252 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 SERPINI1Q99574 410 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 ULBP1Q9BZM6 244 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 TLK1Q9UKI8 766 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 GOLGA8TH3BQL2 631 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 GABRDO14764 452 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 CABYRO75952 493 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 TPH1P17752 444 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 TFEBP19484 476 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 EPHA3P29320 983 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 ALDH1A3P47895 512 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 DAOAP59103 153 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 ARL13AQ5H913 290 aaPredicted RBP14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 PPM1LQ5SGD2 360 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 UBXN11Q5T124 520 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 KIAA0319Q5VV43 1072 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 AP1ARQ63HQ0 302 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 DNAJC14Q6Y2X3 702 aaPredicted RBP14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 LCA5Q86VQ0 697 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 DSELQ8IZU8 1212 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 PQLC1Q8N2U9 271 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 ICA1LQ8NDH6 482 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 DPF3Q92784 378 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 PGAP3Q96FM1 320 aaPredicted RBP14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 TEKT5Q96M29 485 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 MED10Q9BTT4 135 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 RHOJQ9H4E5 214 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 ZNF385DQ9H6B1 395 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 NSMCE4AQ9NXX6 385 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 VPS28Q9UK41 221 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 INPP5FQ9Y2H2 1132 aa14.44□□□□□ -0.1
CDK5RAP3-237ENST00000585163 MBLAC1A4D2B0 266 aaPredicted RBP14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 NEMP1O14524 444 aa14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 GRID2O43424 1007 aa14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 AP1G1O43747 822 aa14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 PIGNO95427 931 aa14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 PABPC4LP0CB38 370 aaKnown RBP14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 FAM200BP0CF97 657 aa14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 SMIM10L2AP0DMW4 78 aa14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 SMIM10L2BP0DMW5 78 aa14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 ADSLP30566 484 aaPredicted RBP14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 CDH17Q12864 832 aa14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 PRKAA1Q13131 559 aa14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 PDK3Q15120 406 aa14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 GRAMD1BQ3KR37 738 aa14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 WSCD1Q658N2 575 aa14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 ZSCAN18Q8TBC5 510 aaPredicted RBP14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 PIP4K2CQ8TBX8 421 aa14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 GTF3C2Q8WUA4 911 aaPredicted RBP14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 KIFC1Q9BW19 673 aa14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 ZNF236Q9UL36 1845 aa14.43□□□□□ -0.1
CDK5RAP3-237ENST00000585163 AP3B1O00203 1094 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms