RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 CNDP2Q96KP4 475 aaKnown RBP16.09■□□□□ 0.17
SKA2-209ENST00000583976 BTN2A3PQ96KV6 586 aa16.09■□□□□ 0.17
SKA2-209ENST00000583976 CAAP1Q9H8G2 361 aa16.09■□□□□ 0.17
SKA2-209ENST00000583976 POPDC2Q9HBU9 364 aa16.09■□□□□ 0.17
SKA2-209ENST00000583976 DKK4Q9UBT3 224 aa16.09■□□□□ 0.17
SKA2-209ENST00000583976 SARDHQ9UL12 918 aa16.09■□□□□ 0.17
SKA2-209ENST00000583976 CA5BQ9Y2D0 317 aa16.09■□□□□ 0.17
SKA2-209ENST00000583976 URB1O60287 2271 aaKnown RBP16.08■□□□□ 0.17
SKA2-209ENST00000583976 ADH1BP00325 375 aa16.08■□□□□ 0.16
SKA2-209ENST00000583976 ITGAVP06756 1048 aa16.08■□□□□ 0.16
SKA2-209ENST00000583976 ABCB4P21439 1286 aa16.08■□□□□ 0.16
SKA2-209ENST00000583976 C5AR1P21730 350 aa16.08■□□□□ 0.16
SKA2-209ENST00000583976 CCR5P51681 352 aa16.08■□□□□ 0.16
SKA2-209ENST00000583976 ADKP55263 362 aaKnown RBP16.08■□□□□ 0.16
SKA2-209ENST00000583976 TDRD12Q587J7 1177 aaKnown RBP16.08■□□□□ 0.16
SKA2-209ENST00000583976 OTUD1Q5VV17 481 aaPredicted RBP16.08■□□□□ 0.16
SKA2-209ENST00000583976 TRIM72Q6ZMU5 477 aa16.08■□□□□ 0.16
SKA2-209ENST00000583976 FAM183BPQ6ZVS7 135 aa16.08■□□□□ 0.16
SKA2-209ENST00000583976 Q6ZVU0 165 aa16.08■□□□□ 0.16
SKA2-209ENST00000583976 BEND5Q7L4P6 421 aa16.08■□□□□ 0.16
SKA2-209ENST00000583976 ZNF571Q7Z3V5 609 aaPredicted RBP16.08■□□□□ 0.16
SKA2-209ENST00000583976 PHLDB2Q86SQ0 1253 aa16.08■□□□□ 0.16
SKA2-209ENST00000583976 SPATS2Q86XZ4 545 aaKnown RBP16.08■□□□□ 0.16
SKA2-209ENST00000583976 DEFB106AQ8N104 65 aa16.08■□□□□ 0.16
SKA2-209ENST00000583976 EID2Q8N6I1 236 aa16.08■□□□□ 0.16
SKA2-209ENST00000583976 DCBLD2Q96PD2 775 aa16.08■□□□□ 0.16
SKA2-209ENST00000583976 GDF3Q9NR23 364 aa16.08■□□□□ 0.16
SKA2-209ENST00000583976 DDIT4Q9NX09 232 aa16.08■□□□□ 0.16
SKA2-209ENST00000583976 A0A1B0GVM2 712 aa16.07■□□□□ 0.16
SKA2-209ENST00000583976 TCAF2A6NFQ2 919 aa16.07■□□□□ 0.16
SKA2-209ENST00000583976 TMCO5BA8MYB1 307 aa16.07■□□□□ 0.16
SKA2-209ENST00000583976 KCNU1A8MYU2 1149 aa16.07■□□□□ 0.16
SKA2-209ENST00000583976 LATO43561 262 aa16.07■□□□□ 0.16
SKA2-209ENST00000583976 SDC3O75056 442 aa16.07■□□□□ 0.16
SKA2-209ENST00000583976 RFPL3O75679 317 aa16.07■□□□□ 0.16
SKA2-209ENST00000583976 SERPING1P05155 500 aa16.07■□□□□ 0.16
SKA2-209ENST00000583976 UNGP13051 313 aaPredicted RBP16.07■□□□□ 0.16
SKA2-209ENST00000583976 PRKCIP41743 596 aa16.07■□□□□ 0.16
SKA2-209ENST00000583976 SNX16P57768 344 aa16.07■□□□□ 0.16
SKA2-209ENST00000583976 BNIP3Q12983 259 aa16.07■□□□□ 0.16
SKA2-209ENST00000583976 CLEC16AQ2KHT3 1053 aa16.07■□□□□ 0.16
SKA2-209ENST00000583976 AGBL4Q5VU57 503 aa16.07■□□□□ 0.16
SKA2-209ENST00000583976 NAPEPLDQ6IQ20 393 aa16.07■□□□□ 0.16
SKA2-209ENST00000583976 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.07■□□□□ 0.16
SKA2-209ENST00000583976 DRC7Q8IY82 874 aa16.07■□□□□ 0.16
SKA2-209ENST00000583976 OR8K1Q8NGG5 319 aa16.07■□□□□ 0.16
SKA2-209ENST00000583976 SYN2Q92777 582 aaPredicted RBP16.07■□□□□ 0.16
SKA2-209ENST00000583976 FAM131CQ96AQ9 280 aa16.07■□□□□ 0.16
SKA2-209ENST00000583976 C18orf8Q96DM3 657 aa16.07■□□□□ 0.16
SKA2-209ENST00000583976 ALG14Q96F25 216 aa16.07■□□□□ 0.16
SKA2-209ENST00000583976 MRFAP1L1Q96HT8 127 aa16.07■□□□□ 0.16
SKA2-209ENST00000583976 SLC2A13Q96QE2 648 aa16.07■□□□□ 0.16
SKA2-209ENST00000583976 MYOCQ99972 504 aa16.07■□□□□ 0.16
SKA2-209ENST00000583976 SCUBE2Q9NQ36 999 aa16.07■□□□□ 0.16
SKA2-209ENST00000583976 VANGL2Q9ULK5 521 aa16.07■□□□□ 0.16
SKA2-209ENST00000583976 MYLKQ15746 1914 aa16.07■□□□□ 0.16
SKA2-209ENST00000583976 GCN1Q92616 2671 aaKnown RBP16.06■□□□□ 0.16
SKA2-209ENST00000583976 ARID1BQ8NFD5 2236 aaPredicted RBP16.06■□□□□ 0.16
SKA2-209ENST00000583976 ADCY5O95622 1261 aa16.06■□□□□ 0.16
SKA2-209ENST00000583976 LDOC1O95751 146 aaPredicted RBP16.06■□□□□ 0.16
SKA2-209ENST00000583976 PLEKP08567 350 aaPredicted RBP16.06■□□□□ 0.16
SKA2-209ENST00000583976 NSFP46459 744 aaKnown RBP16.06■□□□□ 0.16
SKA2-209ENST00000583976 YWHAZP63104 245 aaKnown RBP16.06■□□□□ 0.16
SKA2-209ENST00000583976 CNTN1Q12860 1018 aa16.06■□□□□ 0.16
SKA2-209ENST00000583976 TBX2Q13207 712 aaPredicted RBP16.06■□□□□ 0.16
SKA2-209ENST00000583976 TSR1Q2NL82 804 aaKnown RBP16.06■□□□□ 0.16
SKA2-209ENST00000583976 HES3Q5TGS1 186 aa16.06■□□□□ 0.16
SKA2-209ENST00000583976 HGSNATQ68CP4 663 aa16.06■□□□□ 0.16
SKA2-209ENST00000583976 FBXL22Q6P050 247 aa16.06■□□□□ 0.16
SKA2-209ENST00000583976 KANSL1Q7Z3B3 1105 aa16.06■□□□□ 0.16
SKA2-209ENST00000583976 ATP6V0D2Q8N8Y2 350 aa16.06■□□□□ 0.16
SKA2-209ENST00000583976 RPRD1AQ96P16 312 aaPredicted RBP16.06■□□□□ 0.16
SKA2-209ENST00000583976 C11orf70Q9BRQ4 267 aa16.06■□□□□ 0.16
SKA2-209ENST00000583976 SYT11Q9BT88 431 aa16.06■□□□□ 0.16
SKA2-209ENST00000583976 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.06■□□□□ 0.16
SKA2-209ENST00000583976 TRIM62Q9BVG3 475 aa16.06■□□□□ 0.16
SKA2-209ENST00000583976 ANLNQ9NQW6 1124 aa16.06■□□□□ 0.16
SKA2-209ENST00000583976 TAS2R14Q9NYV8 317 aa16.06■□□□□ 0.16
SKA2-209ENST00000583976 ARHGAP20Q9P2F6 1191 aa16.06■□□□□ 0.16
SKA2-209ENST00000583976 SNX10Q9Y5X0 201 aa16.06■□□□□ 0.16
SKA2-209ENST00000583976 TBC1D3DA0A087WVF3 549 aa16.05■□□□□ 0.16
SKA2-209ENST00000583976 TBC1D3IA0A087WXS9 549 aa16.05■□□□□ 0.16
SKA2-209ENST00000583976 TBC1D3EA0A087X179 549 aa16.05■□□□□ 0.16
SKA2-209ENST00000583976 TBC1D3KA0A087X1G2 549 aa16.05■□□□□ 0.16
SKA2-209ENST00000583976 TBC1D3FA6NER0 549 aaPredicted RBP16.05■□□□□ 0.16
SKA2-209ENST00000583976 TBC1D3LB9A6J9 549 aa16.05■□□□□ 0.16
SKA2-209ENST00000583976 AKR1B15C9JRZ8 316 aaPredicted RBP16.05■□□□□ 0.16
SKA2-209ENST00000583976 GOLGA8SH3BPF8 625 aa16.05■□□□□ 0.16
SKA2-209ENST00000583976 I6L893 689 aaPredicted RBP16.05■□□□□ 0.16
SKA2-209ENST00000583976 TLR4O00206 839 aa16.05■□□□□ 0.16
SKA2-209ENST00000583976 RNF103O00237 685 aa16.05■□□□□ 0.16
SKA2-209ENST00000583976 DDX3XO00571 662 aaKnown RBP eCLIP16.05■□□□□ 0.16
SKA2-209ENST00000583976 PLRG1O43660 514 aaKnown RBP16.05■□□□□ 0.16
SKA2-209ENST00000583976 BNIP3LO60238 219 aa16.05■□□□□ 0.16
SKA2-209ENST00000583976 DFNA5O60443 496 aa16.05■□□□□ 0.16
SKA2-209ENST00000583976 MFAP3LO75121 409 aa16.05■□□□□ 0.16
SKA2-209ENST00000583976 TBC1D3HP0C7X1 549 aa16.05■□□□□ 0.16
SKA2-209ENST00000583976 TFE3P19532 575 aaPredicted RBP16.05■□□□□ 0.16
SKA2-209ENST00000583976 GABRB2P47870 512 aa16.05■□□□□ 0.16
SKA2-209ENST00000583976 RNASE9P60153 205 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms