RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 CYP1B1Q16678 543 aa16.22■□□□□ 0.19
CSNK1D-212ENST00000580061 PTPRNQ16849 979 aa16.22■□□□□ 0.19
CSNK1D-212ENST00000580061 DNTTIP2Q5QJE6 756 aaKnown RBP16.22■□□□□ 0.19
CSNK1D-212ENST00000580061 DRICH1Q6PGQ1 229 aaPredicted RBP16.22■□□□□ 0.19
CSNK1D-212ENST00000580061 LINGO4Q6UY18 593 aa16.22■□□□□ 0.19
CSNK1D-212ENST00000580061 LEKR1Q6ZMV7 388 aa16.22■□□□□ 0.19
CSNK1D-212ENST00000580061 CDKL3Q8IVW4 592 aaPredicted RBP16.22■□□□□ 0.19
CSNK1D-212ENST00000580061 ZNF687Q8N1G0 1237 aa16.22■□□□□ 0.19
CSNK1D-212ENST00000580061 CYB5D2Q8WUJ1 264 aa16.22■□□□□ 0.19
CSNK1D-212ENST00000580061 UCMAQ8WVF2 138 aa16.22■□□□□ 0.19
CSNK1D-212ENST00000580061 MAML1Q92585 1016 aa16.22■□□□□ 0.19
CSNK1D-212ENST00000580061 FATE1Q969F0 183 aa16.22■□□□□ 0.19
CSNK1D-212ENST00000580061 NKD2Q969F2 451 aaPredicted RBP16.22■□□□□ 0.19
CSNK1D-212ENST00000580061 MRGPRX3Q96LB0 322 aa16.22■□□□□ 0.19
CSNK1D-212ENST00000580061 ZNF599Q96NL3 588 aa16.22■□□□□ 0.19
CSNK1D-212ENST00000580061 SLC25A13Q9UJS0 675 aa16.22■□□□□ 0.19
CSNK1D-212ENST00000580061 HCN2Q9UL51 889 aa16.22■□□□□ 0.19
CSNK1D-212ENST00000580061 NDRG2Q9UN36 371 aaKnown RBP16.22■□□□□ 0.19
CSNK1D-212ENST00000580061 ERVW-1Q9UQF0 538 aa16.22■□□□□ 0.19
CSNK1D-212ENST00000580061 HS3ST2Q9Y278 367 aa16.22■□□□□ 0.19
CSNK1D-212ENST00000580061 ACTL7AQ9Y615 435 aa16.22■□□□□ 0.19
CSNK1D-212ENST00000580061 MUC3AQ02505 3323 aa16.22■□□□□ 0.19
CSNK1D-212ENST00000580061 GOLGA6L10A0A0M3HER8 536 aa16.21■□□□□ 0.19
CSNK1D-212ENST00000580061 KANSL1LA0AUZ9 987 aa16.21■□□□□ 0.19
CSNK1D-212ENST00000580061 BCLAF3A2AJT9 711 aaKnown RBP16.21■□□□□ 0.19
CSNK1D-212ENST00000580061 DCXO43602 365 aa16.21■□□□□ 0.19
CSNK1D-212ENST00000580061 MT-CO1P00395 513 aa16.21■□□□□ 0.19
CSNK1D-212ENST00000580061 CHRM1P11229 460 aaPredicted RBP16.21■□□□□ 0.19
CSNK1D-212ENST00000580061 TARSP26639 723 aaKnown RBP16.21■□□□□ 0.19
CSNK1D-212ENST00000580061 RBL1P28749 1068 aa16.21■□□□□ 0.19
CSNK1D-212ENST00000580061 KIR2DL1P43626 348 aaPredicted RBP16.21■□□□□ 0.19
CSNK1D-212ENST00000580061 STK19P49842 368 aaPredicted RBP16.21■□□□□ 0.19
CSNK1D-212ENST00000580061 SERPINH1P50454 418 aaKnown RBP16.21■□□□□ 0.19
CSNK1D-212ENST00000580061 GEMIN4P57678 1058 aaKnown RBP16.21■□□□□ 0.19
CSNK1D-212ENST00000580061 SNX1Q13596 522 aa16.21■□□□□ 0.19
CSNK1D-212ENST00000580061 BYSLQ13895 437 aaKnown RBP16.21■□□□□ 0.19
CSNK1D-212ENST00000580061 OASLQ15646 514 aaKnown RBP16.21■□□□□ 0.19
CSNK1D-212ENST00000580061 WHAMMP3Q1A5X7 153 aa16.21■□□□□ 0.19
CSNK1D-212ENST00000580061 INO80DQ53TQ3 878 aaPredicted RBP16.21■□□□□ 0.19
CSNK1D-212ENST00000580061 EMC10Q5UCC4 262 aa16.21■□□□□ 0.19
CSNK1D-212ENST00000580061 DARS2Q6PI48 645 aaKnown RBP16.21■□□□□ 0.19
CSNK1D-212ENST00000580061 SH2D3CQ8N5H7 860 aa16.21■□□□□ 0.19
CSNK1D-212ENST00000580061 C12orf50Q8NA57 414 aaPredicted RBP16.21■□□□□ 0.19
CSNK1D-212ENST00000580061 EDAQ92838 391 aa16.21■□□□□ 0.19
CSNK1D-212ENST00000580061 MYO19Q96H55 970 aa16.21■□□□□ 0.19
CSNK1D-212ENST00000580061 RPL10LQ96L21 214 aaKnown RBP16.21■□□□□ 0.19
CSNK1D-212ENST00000580061 C10orf88Q9H8K7 445 aa16.21■□□□□ 0.19
CSNK1D-212ENST00000580061 LTB4R2Q9NPC1 389 aa16.21■□□□□ 0.19
CSNK1D-212ENST00000580061 UBA2Q9UBT2 640 aaPredicted RBP16.21■□□□□ 0.19
CSNK1D-212ENST00000580061 MRPS17Q9Y2R5 130 aaKnown RBP16.21■□□□□ 0.19
CSNK1D-212ENST00000580061 KCNK1O00180 336 aa16.2■□□□□ 0.18
CSNK1D-212ENST00000580061 PHF2O75151 1096 aa16.2■□□□□ 0.18
CSNK1D-212ENST00000580061 CHRNB1P11230 501 aa16.2■□□□□ 0.18
CSNK1D-212ENST00000580061 SRCP12931 536 aa16.2■□□□□ 0.18
CSNK1D-212ENST00000580061 HNRNPLP14866 589 aaKnown RBP eCLIP16.2■□□□□ 0.182e-7■■■■■ 32.8
CSNK1D-212ENST00000580061 CLCN6P51797 869 aa16.2■□□□□ 0.18
CSNK1D-212ENST00000580061 CKAP4Q07065 602 aaKnown RBP16.2■□□□□ 0.18
CSNK1D-212ENST00000580061 SIGLEC14Q08ET2 396 aa16.2■□□□□ 0.18
CSNK1D-212ENST00000580061 SLC10A7Q0GE19 358 aa16.2■□□□□ 0.18
CSNK1D-212ENST00000580061 HNRNPDQ14103 355 aaKnown RBP16.2■□□□□ 0.18
CSNK1D-212ENST00000580061 ZNF234Q14588 700 aa16.2■□□□□ 0.18
CSNK1D-212ENST00000580061 RFTN1Q14699 578 aaPredicted RBP16.2■□□□□ 0.18
CSNK1D-212ENST00000580061 LBRQ14739 615 aaKnown RBP16.2■□□□□ 0.18
CSNK1D-212ENST00000580061 E2F5Q15329 346 aa16.2■□□□□ 0.18
CSNK1D-212ENST00000580061 FBXO43Q4G163 708 aa16.2■□□□□ 0.18
CSNK1D-212ENST00000580061 TMCO4Q5TGY1 634 aa16.2■□□□□ 0.18
CSNK1D-212ENST00000580061 EGFLAMQ63HQ2 1017 aa16.2■□□□□ 0.18
CSNK1D-212ENST00000580061 HEATR6Q6AI08 1181 aaKnown RBP16.2■□□□□ 0.18
CSNK1D-212ENST00000580061 ZNF572Q7Z3I7 529 aaPredicted RBP16.2■□□□□ 0.18
CSNK1D-212ENST00000580061 TEX26Q8N6G2 289 aa16.2■□□□□ 0.18
CSNK1D-212ENST00000580061 ATP11CQ8NB49 1132 aa16.2■□□□□ 0.18
CSNK1D-212ENST00000580061 KDM1BQ8NB78 822 aa16.2■□□□□ 0.18
CSNK1D-212ENST00000580061 KCNV2Q8TDN2 545 aa16.2■□□□□ 0.18
CSNK1D-212ENST00000580061 NSMCE1Q8WV22 266 aa16.2■□□□□ 0.18
CSNK1D-212ENST00000580061 HTR3CQ8WXA8 447 aa16.2■□□□□ 0.18
CSNK1D-212ENST00000580061 CASKIN2Q8WXE0 1202 aa16.2■□□□□ 0.18
CSNK1D-212ENST00000580061 MAGOHBQ96A72 148 aaKnown RBP16.2■□□□□ 0.18
CSNK1D-212ENST00000580061 NELL2Q99435 816 aa16.2■□□□□ 0.18
CSNK1D-212ENST00000580061 THAP10Q9P2Z0 257 aaPredicted RBP16.2■□□□□ 0.18
CSNK1D-212ENST00000580061 SLCO3A1Q9UIG8 710 aa16.2■□□□□ 0.18
CSNK1D-212ENST00000580061 PLA2G4CQ9UP65 541 aa16.2■□□□□ 0.18
CSNK1D-212ENST00000580061 NCOR1O75376 2440 aa16.19■□□□□ 0.18
CSNK1D-212ENST00000580061 CCDC188H7C350 402 aa16.19■□□□□ 0.18
CSNK1D-212ENST00000580061 K7ERQ8 282 aa16.19■□□□□ 0.18
CSNK1D-212ENST00000580061 NPC1O15118 1278 aa16.19■□□□□ 0.18
CSNK1D-212ENST00000580061 KCNN4O15554 427 aa16.19■□□□□ 0.18
CSNK1D-212ENST00000580061 MTSS1O43312 755 aa16.19■□□□□ 0.18
CSNK1D-212ENST00000580061 SMAD6O43541 496 aaKnown RBP16.19■□□□□ 0.18
CSNK1D-212ENST00000580061 ATP9BO43861 1147 aa16.19■□□□□ 0.18
CSNK1D-212ENST00000580061 ZNF189O75820 626 aaPredicted RBP16.19■□□□□ 0.18
CSNK1D-212ENST00000580061 TMCC1O94876 653 aa16.19■□□□□ 0.18
CSNK1D-212ENST00000580061 ITGAVP06756 1048 aa16.19■□□□□ 0.18
CSNK1D-212ENST00000580061 CCNB1P14635 433 aa16.19■□□□□ 0.18
CSNK1D-212ENST00000580061 NNMTP40261 264 aa16.19■□□□□ 0.18
CSNK1D-212ENST00000580061 KCNJ1P48048 391 aa16.19■□□□□ 0.18
CSNK1D-212ENST00000580061 SEC13P55735 322 aa16.19■□□□□ 0.18
CSNK1D-212ENST00000580061 ST8SIA6P61647 398 aa16.19■□□□□ 0.18
CSNK1D-212ENST00000580061 IFI35P80217 286 aaPredicted RBP16.19■□□□□ 0.18
CSNK1D-212ENST00000580061 MRPS21P82921 87 aaKnown RBP16.19■□□□□ 0.18
CSNK1D-212ENST00000580061 UBXN2BQ14CS0 331 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms