RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 KLHL11Q9NVR0 708 aa12.11□□□□□ -0.47
CDH8-202ENST00000577228 HS3ST2Q9Y278 367 aa12.11□□□□□ -0.47
CDH8-202ENST00000577228 TBC1D30Q9Y2I9 924 aa12.11□□□□□ -0.47
CDH8-202ENST00000577228 SMG1Q96Q15 3661 aaKnown RBP12.1□□□□□ -0.47
CDH8-202ENST00000577228 SNAP91O60641 907 aa12.1□□□□□ -0.47
CDH8-202ENST00000577228 C1QL1O75973 258 aa12.1□□□□□ -0.47
CDH8-202ENST00000577228 FGFR1OPO95684 399 aaKnown RBP12.1□□□□□ -0.47
CDH8-202ENST00000577228 MT-CO1P00395 513 aa12.1□□□□□ -0.47
CDH8-202ENST00000577228 CTSLP07711 333 aa12.1□□□□□ -0.47
CDH8-202ENST00000577228 SRCP12931 536 aa12.1□□□□□ -0.47
CDH8-202ENST00000577228 CHRNA3P32297 505 aa12.1□□□□□ -0.47
CDH8-202ENST00000577228 SNX16P57768 344 aa12.1□□□□□ -0.47
CDH8-202ENST00000577228 KCNMA1Q12791 1236 aa12.1□□□□□ -0.47
CDH8-202ENST00000577228 ZNF284Q2VY69 593 aa12.1□□□□□ -0.47
CDH8-202ENST00000577228 NEK5Q6P3R8 708 aa12.1□□□□□ -0.47
CDH8-202ENST00000577228 OLFML1Q6UWY5 402 aa12.1□□□□□ -0.47
CDH8-202ENST00000577228 FAM183BPQ6ZVS7 135 aa12.1□□□□□ -0.47
CDH8-202ENST00000577228 GPR155Q7Z3F1 870 aa12.1□□□□□ -0.47
CDH8-202ENST00000577228 TMC6Q7Z403 805 aa12.1□□□□□ -0.47
CDH8-202ENST00000577228 ERICH1Q86X53 443 aa12.1□□□□□ -0.47
CDH8-202ENST00000577228 WDTC1Q8N5D0 677 aa12.1□□□□□ -0.47
CDH8-202ENST00000577228 ATP11CQ8NB49 1132 aa12.1□□□□□ -0.47
CDH8-202ENST00000577228 C1orf131Q8NDD1 294 aaKnown RBP12.1□□□□□ -0.47
CDH8-202ENST00000577228 ARRDC3Q96B67 414 aa12.1□□□□□ -0.47
CDH8-202ENST00000577228 PSMB7Q99436 277 aa12.1□□□□□ -0.47
CDH8-202ENST00000577228 FZD3Q9NPG1 666 aa12.1□□□□□ -0.47
CDH8-202ENST00000577228 UCKL1Q9NWZ5 548 aa12.1□□□□□ -0.47
CDH8-202ENST00000577228 VPS51Q9UID3 782 aa12.1□□□□□ -0.47
CDH8-202ENST00000577228 PCDHGC3Q9UN70 934 aa12.1□□□□□ -0.47
CDH8-202ENST00000577228 SHROOM3Q8TF72 1996 aa12.1□□□□□ -0.47
CDH8-202ENST00000577228 TEX51A0A1B0GUA7 166 aa12.09□□□□□ -0.47
CDH8-202ENST00000577228 K7ERQ8 282 aa12.09□□□□□ -0.47
CDH8-202ENST00000577228 M0QYT0 321 aa12.09□□□□□ -0.47
CDH8-202ENST00000577228 PIAS2O75928 621 aa12.09□□□□□ -0.47
CDH8-202ENST00000577228 CNTN5O94779 1100 aa12.09□□□□□ -0.47
CDH8-202ENST00000577228 PCDH8O95206 1070 aa12.09□□□□□ -0.47
CDH8-202ENST00000577228 ZIC2O95409 532 aaPredicted RBP12.09□□□□□ -0.47
CDH8-202ENST00000577228 PRNPP04156 253 aa12.09□□□□□ -0.47
CDH8-202ENST00000577228 ERBB2P04626 1255 aa12.09□□□□□ -0.47
CDH8-202ENST00000577228 ALPPL2P10696 532 aa12.09□□□□□ -0.47
CDH8-202ENST00000577228 HNRNPA2B1P22626 353 aaKnown RBP12.09□□□□□ -0.47
CDH8-202ENST00000577228 RRM1P23921 792 aa12.09□□□□□ -0.47
CDH8-202ENST00000577228 NOS2P35228 1153 aa12.09□□□□□ -0.47
CDH8-202ENST00000577228 SLC6A3Q01959 620 aa12.09□□□□□ -0.47
CDH8-202ENST00000577228 TLE3Q04726 772 aa12.09□□□□□ -0.47
CDH8-202ENST00000577228 C5orf22Q49AR2 442 aa12.09□□□□□ -0.47
CDH8-202ENST00000577228 ALFQ53S48 1182 aa12.09□□□□□ -0.47
CDH8-202ENST00000577228 SLC26A9Q7LBE3 791 aa12.09□□□□□ -0.47
CDH8-202ENST00000577228 SPACA3Q8IXA5 215 aa12.09□□□□□ -0.47
CDH8-202ENST00000577228 DCAF4L2Q8NA75 395 aa12.09□□□□□ -0.47
CDH8-202ENST00000577228 LSM14AQ8ND56 463 aaKnown RBP12.09□□□□□ -0.47
CDH8-202ENST00000577228 TMIEQ8NEW7 156 aa12.09□□□□□ -0.47
CDH8-202ENST00000577228 OR13H1Q8NG92 308 aa12.09□□□□□ -0.47
CDH8-202ENST00000577228 OR2A12Q8NGT7 310 aa12.09□□□□□ -0.47
CDH8-202ENST00000577228 GRIN3AQ8TCU5 1115 aa12.09□□□□□ -0.47
CDH8-202ENST00000577228 SHC3Q92529 594 aa12.09□□□□□ -0.47
CDH8-202ENST00000577228 LGMNQ99538 433 aa12.09□□□□□ -0.47
CDH8-202ENST00000577228 SYNCQ9H7C4 482 aa12.09□□□□□ -0.47
CDH8-202ENST00000577228 PIGVQ9NUD9 493 aa12.09□□□□□ -0.47
CDH8-202ENST00000577228 RRN3Q9NYV6 651 aa12.09□□□□□ -0.47
CDH8-202ENST00000577228 APEX2Q9UBZ4 518 aa12.09□□□□□ -0.47
CDH8-202ENST00000577228 PCDHB1Q9Y5F3 818 aa12.09□□□□□ -0.47
CDH8-202ENST00000577228 HELZ2Q9BYK8 2649 aaKnown RBP12.09□□□□□ -0.47
CDH8-202ENST00000577228 DOCK9Q9BZ29 2069 aa12.09□□□□□ -0.47
CDH8-202ENST00000577228 A6NNZ2 444 aa12.08□□□□□ -0.48
CDH8-202ENST00000577228 SMAD6O43541 496 aaKnown RBP12.08□□□□□ -0.48
CDH8-202ENST00000577228 OPA1O60313 960 aa12.08□□□□□ -0.48
CDH8-202ENST00000577228 ADCY5O95622 1261 aa12.08□□□□□ -0.48
CDH8-202ENST00000577228 CKMT1AP12532 417 aa12.08□□□□□ -0.48
CDH8-202ENST00000577228 SLC9A1P19634 815 aa12.08□□□□□ -0.48
CDH8-202ENST00000577228 KRT9P35527 623 aa12.08□□□□□ -0.48
CDH8-202ENST00000577228 RECQLP46063 649 aaPredicted RBP12.08□□□□□ -0.48
CDH8-202ENST00000577228 CLCN6P51797 869 aa12.08□□□□□ -0.48
CDH8-202ENST00000577228 PCBP4P57723 403 aaKnown RBP12.08□□□□□ -0.48
CDH8-202ENST00000577228 CLDN2P57739 230 aa12.08□□□□□ -0.48
CDH8-202ENST00000577228 CXADRP78310 365 aa12.08□□□□□ -0.48
CDH8-202ENST00000577228 APBA1Q02410 837 aa12.08□□□□□ -0.48
CDH8-202ENST00000577228 PTK2Q05397 1052 aa12.08□□□□□ -0.48
CDH8-202ENST00000577228 PTPN20Q4JDL3 420 aa12.08□□□□□ -0.48
CDH8-202ENST00000577228 BRMS1LQ5PSV4 323 aa12.08□□□□□ -0.48
CDH8-202ENST00000577228 OTUD1Q5VV17 481 aaPredicted RBP12.08□□□□□ -0.48
CDH8-202ENST00000577228 SEL1L3Q68CR1 1132 aa12.08□□□□□ -0.48
CDH8-202ENST00000577228 C22orf39Q6P5X5 142 aa12.08□□□□□ -0.48
CDH8-202ENST00000577228 LRRC31Q6UY01 552 aa12.08□□□□□ -0.48
CDH8-202ENST00000577228 LINGO4Q6UY18 593 aa12.08□□□□□ -0.48
CDH8-202ENST00000577228 GBP6Q6ZN66 633 aa12.08□□□□□ -0.48
CDH8-202ENST00000577228 GCNT7Q6ZNI0 430 aa12.08□□□□□ -0.48
CDH8-202ENST00000577228 ERN2Q76MJ5 926 aaKnown RBP12.08□□□□□ -0.48
CDH8-202ENST00000577228 PTAR1Q7Z6K3 402 aaPredicted RBP12.08□□□□□ -0.48
CDH8-202ENST00000577228 ABI3BPQ7Z7G0 1075 aa12.08□□□□□ -0.48
CDH8-202ENST00000577228 SETD3Q86TU7 594 aaPredicted RBP12.08□□□□□ -0.48
CDH8-202ENST00000577228 CREBRFQ8IUR6 639 aa12.08□□□□□ -0.48
CDH8-202ENST00000577228 CHST14Q8NCH0 376 aa12.08□□□□□ -0.48
CDH8-202ENST00000577228 ZNF397Q8NF99 534 aaPredicted RBP12.08□□□□□ -0.48
CDH8-202ENST00000577228 PPP1R16AQ96I34 528 aa12.08□□□□□ -0.48
CDH8-202ENST00000577228 ZNF578Q96N58 590 aaPredicted RBP12.08□□□□□ -0.48
CDH8-202ENST00000577228 DEPDC7Q96QD5 511 aa12.08□□□□□ -0.48
CDH8-202ENST00000577228 TKTL2Q9H0I9 626 aa12.08□□□□□ -0.48
CDH8-202ENST00000577228 TNKS2Q9H2K2 1166 aa12.08□□□□□ -0.48
CDH8-202ENST00000577228 WDCPQ9H6R7 721 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms