RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 FARP1Q9Y4F1 1045 aaPredicted RBP11.28□□□□□ -0.6
CHD3-216ENST00000573936 RAD54BQ9Y620 910 aa11.28□□□□□ -0.6
CHD3-216ENST00000573936 ALG6Q9Y672 507 aa11.28□□□□□ -0.6
CHD3-216ENST00000573936 CNOT1A5YKK6 2376 aaKnown RBP11.27□□□□□ -0.6
CHD3-216ENST00000573936 SDK1Q7Z5N4 2213 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 MAP1BP46821 2468 aaKnown RBP11.27□□□□□ -0.61
CHD3-216ENST00000573936 TTC34A8MYJ7 566 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 RASA4BC9J798 803 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 CBX4O00257 560 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 RASA4O43374 803 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 KDELR3O43731 214 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 BUB1BO60566 1050 aaPredicted RBP11.27□□□□□ -0.61
CHD3-216ENST00000573936 SNAP91O60641 907 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 ZNF217O75362 1048 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 ACADMP11310 421 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 HLA-EP13747 358 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 GABRG2P18507 467 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 COMTP21964 271 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 TGM1P22735 817 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 SERPINB6P35237 376 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 GJC1P36383 396 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 PXNP49023 591 aaPredicted RBP11.27□□□□□ -0.61
CHD3-216ENST00000573936 TAS2R40P59535 323 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 CCZ1BP86790 482 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 CCZ1P86791 482 aaPredicted RBP11.27□□□□□ -0.61
CHD3-216ENST00000573936 SFSWAPQ12872 951 aaKnown RBP11.27□□□□□ -0.61
CHD3-216ENST00000573936 SRSF5Q13243 272 aaKnown RBP11.27□□□□□ -0.61
CHD3-216ENST00000573936 DPYSQ14117 519 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 DLG2Q15700 870 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 CSRP2Q16527 193 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 ACCSLQ4AC99 568 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 TXNRD3NBQ6F5E7 133 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 C11orf63Q6NUN7 778 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 KIAA1211LQ6NV74 962 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 TMCO3Q6UWJ1 677 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 DAAM2Q86T65 1068 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 VSIG1Q86XK7 387 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 ZNF354CQ86Y25 554 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 SH2D3CQ8N5H7 860 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 ATP11CQ8NB49 1132 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 MDGA1Q8NFP4 955 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 TPCN2Q8NHX9 752 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 CASKIN2Q8WXE0 1202 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 PRCCQ92733 491 aaPredicted RBP11.27□□□□□ -0.61
CHD3-216ENST00000573936 SIPA1Q96FS4 1042 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 SPACA7Q96KW9 195 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 CCDC114Q96M63 670 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 CSPG4P5Q96PW8 444 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 ZNF670Q9BS34 389 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 CEP44Q9C0F1 390 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 PRDM16Q9HAZ2 1276 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 CD248Q9HCU0 757 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 PRSS16Q9NQE7 514 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 SLCO3A1Q9UIG8 710 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 SCML1Q9UN30 329 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 HS3ST2Q9Y278 367 aa11.27□□□□□ -0.61
CHD3-216ENST00000573936 REXO2Q9Y3B8 237 aaKnown RBP11.27□□□□□ -0.61
CHD3-216ENST00000573936 CHD6Q8TD26 2715 aa11.26□□□□□ -0.61
CHD3-216ENST00000573936 RCCD1A6NED2 376 aa11.26□□□□□ -0.61
CHD3-216ENST00000573936 ZNF487B1APH4 448 aa11.26□□□□□ -0.61
CHD3-216ENST00000573936 DCLK1O15075 740 aa11.26□□□□□ -0.61
CHD3-216ENST00000573936 PSTPIP1O43586 416 aa11.26□□□□□ -0.61
CHD3-216ENST00000573936 BUB1O43683 1085 aa11.26□□□□□ -0.61
CHD3-216ENST00000573936 KRT86O43790 486 aa11.26□□□□□ -0.61
CHD3-216ENST00000573936 RPP40O75818 363 aaKnown RBP11.26□□□□□ -0.61
CHD3-216ENST00000573936 ZMPSTE24O75844 475 aa11.26□□□□□ -0.61
CHD3-216ENST00000573936 SRCP12931 536 aa11.26□□□□□ -0.61
CHD3-216ENST00000573936 NDUFV2P19404 249 aa11.26□□□□□ -0.61
CHD3-216ENST00000573936 AMPD1P23109 780 aa11.26□□□□□ -0.61
CHD3-216ENST00000573936 KDELR1P24390 212 aa11.26□□□□□ -0.61
CHD3-216ENST00000573936 ACVRL1P37023 503 aa11.26□□□□□ -0.61
CHD3-216ENST00000573936 STK19P49842 368 aaPredicted RBP11.26□□□□□ -0.61
CHD3-216ENST00000573936 ARSEP51690 589 aa11.26□□□□□ -0.61
CHD3-216ENST00000573936 ZBTB16Q05516 673 aa11.26□□□□□ -0.61
CHD3-216ENST00000573936 SERINC3Q13530 473 aa11.26□□□□□ -0.61
CHD3-216ENST00000573936 ATP13A4Q4VNC1 1196 aa11.26□□□□□ -0.61
CHD3-216ENST00000573936 C9orf64Q5T6V5 341 aa11.26□□□□□ -0.61
CHD3-216ENST00000573936 ZNF776Q68DI1 518 aaPredicted RBP11.26□□□□□ -0.61
CHD3-216ENST00000573936 KIAA1324Q6UXG2 1013 aaKnown RBP11.26□□□□□ -0.61
CHD3-216ENST00000573936 PRR23CQ6ZRP0 262 aa11.26□□□□□ -0.61
CHD3-216ENST00000573936 CEP68Q76N32 757 aa11.26□□□□□ -0.61
CHD3-216ENST00000573936 DSG4Q86SJ6 1040 aa11.26□□□□□ -0.61
CHD3-216ENST00000573936 TMPRSS6Q8IU80 811 aa11.26□□□□□ -0.61
CHD3-216ENST00000573936 SYCE1Q8N0S2 351 aa11.26□□□□□ -0.61
CHD3-216ENST00000573936 RNF10Q8N5U6 811 aaKnown RBP11.26□□□□□ -0.61
CHD3-216ENST00000573936 UBE2Q2Q8WVN8 375 aa11.26□□□□□ -0.61
CHD3-216ENST00000573936 GAB3Q8WWW8 586 aa11.26□□□□□ -0.61
CHD3-216ENST00000573936 TSC1Q92574 1164 aa11.26□□□□□ -0.61
CHD3-216ENST00000573936 MRGPRX1Q96LB2 322 aa11.26□□□□□ -0.61
CHD3-216ENST00000573936 ZNF830Q96NB3 372 aaPredicted RBP11.26□□□□□ -0.61
CHD3-216ENST00000573936 CALN1Q9BXU9 219 aa11.26□□□□□ -0.61
CHD3-216ENST00000573936 MAK16Q9BXY0 300 aaKnown RBP11.26□□□□□ -0.61
CHD3-216ENST00000573936 TPSD1Q9BZJ3 242 aa11.26□□□□□ -0.61
CHD3-216ENST00000573936 LACRTQ9GZZ8 138 aa11.26□□□□□ -0.61
CHD3-216ENST00000573936 KCNF1Q9H3M0 494 aa11.26□□□□□ -0.61
CHD3-216ENST00000573936 LRRC19Q9H756 370 aa11.26□□□□□ -0.61
CHD3-216ENST00000573936 ANGPTL2Q9UKU9 493 aa11.26□□□□□ -0.61
CHD3-216ENST00000573936 TFR2Q9UP52 801 aa11.26□□□□□ -0.61
CHD3-216ENST00000573936 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.26□□□□□ -0.61
CHD3-216ENST00000573936 ADGRG1Q9Y653 693 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms