RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 RIMS3Q9UJD0 308 aa19.4■□□□□ 0.7
SCARF1-206ENST00000573852 ADRA1BP35368 520 aa19.4■□□□□ 0.7
SCARF1-206ENST00000573852 CSRP3P50461 194 aa19.4■□□□□ 0.7
SCARF1-206ENST00000573852 NAGLUP54802 743 aa19.4■□□□□ 0.7
SCARF1-206ENST00000573852 ADGRE1Q14246 886 aa19.4■□□□□ 0.7
SCARF1-206ENST00000573852 CNGA3Q16281 694 aa19.4■□□□□ 0.7
SCARF1-206ENST00000573852 DEFB132Q7Z7B7 95 aa19.4■□□□□ 0.7
SCARF1-206ENST00000573852 CPSF7Q8N684 471 aaKnown RBP19.4■□□□□ 0.7
SCARF1-206ENST00000573852 APPL2Q8NEU8 664 aa19.4■□□□□ 0.7
SCARF1-206ENST00000573852 NMD3Q96D46 503 aaKnown RBP19.4■□□□□ 0.7
SCARF1-206ENST00000573852 LRGUKQ96M69 825 aa19.4■□□□□ 0.7
SCARF1-206ENST00000573852 DUSP16Q9BY84 665 aa19.4■□□□□ 0.7
SCARF1-206ENST00000573852 ADAMTS10Q9H324 1103 aa19.4■□□□□ 0.7
SCARF1-206ENST00000573852 UBP1Q9NZI7 540 aa19.4■□□□□ 0.7
SCARF1-206ENST00000573852 UBQLN1Q9UMX0 589 aaKnown RBP19.4■□□□□ 0.7
SCARF1-206ENST00000573852 SBF1O95248 1867 aa19.4■□□□□ 0.7
SCARF1-206ENST00000573852 STX16-NPEPL1H3BU86 382 aa19.39■□□□□ 0.7
SCARF1-206ENST00000573852 CRTAMO95727 393 aa19.39■□□□□ 0.7
SCARF1-206ENST00000573852 TFAP2AP05549 437 aa19.39■□□□□ 0.7
SCARF1-206ENST00000573852 PPARGP37231 505 aaPredicted RBP19.39■□□□□ 0.7
SCARF1-206ENST00000573852 ADCYAP1R1P41586 468 aa19.39■□□□□ 0.7
SCARF1-206ENST00000573852 RABGGTBP53611 331 aa19.39■□□□□ 0.7
SCARF1-206ENST00000573852 ATXN3P54252 364 aaPredicted RBP19.39■□□□□ 0.7
SCARF1-206ENST00000573852 PPIDQ08752 370 aaKnown RBP19.39■□□□□ 0.7
SCARF1-206ENST00000573852 LAMB3Q13751 1172 aa19.39■□□□□ 0.7
SCARF1-206ENST00000573852 B3GALNT2Q8NCR0 500 aa19.39■□□□□ 0.7
SCARF1-206ENST00000573852 PRICKLE1Q96MT3 831 aaPredicted RBP19.39■□□□□ 0.7
SCARF1-206ENST00000573852 EPAS1Q99814 870 aa19.39■□□□□ 0.7
SCARF1-206ENST00000573852 UBE2OQ9C0C9 1292 aaKnown RBP19.39■□□□□ 0.7
SCARF1-206ENST00000573852 FAM49AQ9H0Q0 323 aaPredicted RBP19.39■□□□□ 0.7
SCARF1-206ENST00000573852 GBA3Q9H227 469 aa19.39■□□□□ 0.7
SCARF1-206ENST00000573852 EPB41L1Q9H4G0 881 aa19.39■□□□□ 0.7
SCARF1-206ENST00000573852 OCEL1Q9H607 264 aa19.39■□□□□ 0.7
SCARF1-206ENST00000573852 COPS7BQ9H9Q2 264 aaPredicted RBP19.39■□□□□ 0.7
SCARF1-206ENST00000573852 GDAP2Q9NXN4 497 aa19.39■□□□□ 0.7
SCARF1-206ENST00000573852 STAP1Q9ULZ2 295 aa19.39■□□□□ 0.7
SCARF1-206ENST00000573852 BPTFQ12830 3046 aa19.39■□□□□ 0.69
SCARF1-206ENST00000573852 ADM5C9JUS6 153 aa19.39■□□□□ 0.69
SCARF1-206ENST00000573852 ENO3P13929 434 aaPredicted RBP19.39■□□□□ 0.69
SCARF1-206ENST00000573852 NFKB1P19838 968 aa19.39■□□□□ 0.69
SCARF1-206ENST00000573852 GK3PQ14409 553 aa19.39■□□□□ 0.69
SCARF1-206ENST00000573852 TICAM1Q8IUC6 712 aa19.39■□□□□ 0.69
SCARF1-206ENST00000573852 LSMEM2Q8N112 164 aa19.39■□□□□ 0.69
SCARF1-206ENST00000573852 PPP1R13LQ8WUF5 828 aa19.39■□□□□ 0.69
SCARF1-206ENST00000573852 MROH8Q9H579 483 aa19.39■□□□□ 0.69
SCARF1-206ENST00000573852 VPS28Q9UK41 221 aa19.39■□□□□ 0.69
SCARF1-206ENST00000573852 SHROOM3Q8TF72 1996 aa19.39■□□□□ 0.69
SCARF1-206ENST00000573852 TSC2P49815 1807 aa19.39■□□□□ 0.69
SCARF1-206ENST00000573852 SMIM28A0A1B0GU29 152 aa19.38■□□□□ 0.69
SCARF1-206ENST00000573852 FYNP06241 537 aa19.38■□□□□ 0.69
SCARF1-206ENST00000573852 AVPR1AP37288 418 aa19.38■□□□□ 0.69
SCARF1-206ENST00000573852 NSUN2Q08J23 767 aaKnown RBP eCLIP19.38■□□□□ 0.69
SCARF1-206ENST00000573852 PPP2R5DQ14738 602 aa19.38■□□□□ 0.69
SCARF1-206ENST00000573852 ANO4Q32M45 955 aa19.38■□□□□ 0.69
SCARF1-206ENST00000573852 RARS2Q5T160 578 aaKnown RBP19.38■□□□□ 0.69
SCARF1-206ENST00000573852 NXNQ6DKJ4 435 aa19.38■□□□□ 0.69
SCARF1-206ENST00000573852 PAQR9Q6ZVX9 377 aa19.38■□□□□ 0.69
SCARF1-206ENST00000573852 BHLHE22Q8NFJ8 381 aaPredicted RBP19.38■□□□□ 0.69
SCARF1-206ENST00000573852 KCTD4Q8WVF5 259 aa19.38■□□□□ 0.69
SCARF1-206ENST00000573852 SLC2A13Q96QE2 648 aa19.38■□□□□ 0.69
SCARF1-206ENST00000573852 GPR22Q99680 433 aa19.38■□□□□ 0.69
SCARF1-206ENST00000573852 HNRNPABQ99729 332 aaKnown RBP19.38■□□□□ 0.69
SCARF1-206ENST00000573852 APBA2Q99767 749 aa19.38■□□□□ 0.69
SCARF1-206ENST00000573852 TLK1Q9UKI8 766 aa19.38■□□□□ 0.69
SCARF1-206ENST00000573852 RUVBL2Q9Y230 463 aaKnown RBP19.38■□□□□ 0.69
SCARF1-206ENST00000573852 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.38■□□□□ 0.69
SCARF1-206ENST00000573852 NRP1O14786 923 aa19.38■□□□□ 0.69
SCARF1-206ENST00000573852 NPY2RP49146 381 aa19.38■□□□□ 0.69
SCARF1-206ENST00000573852 SOX4Q06945 474 aaPredicted RBP19.38■□□□□ 0.69
SCARF1-206ENST00000573852 SEMA3BQ13214 749 aa19.38■□□□□ 0.69
SCARF1-206ENST00000573852 SLC5A9Q2M3M2 681 aa19.38■□□□□ 0.69
SCARF1-206ENST00000573852 MOB2Q70IA6 237 aa19.38■□□□□ 0.69
SCARF1-206ENST00000573852 ZC3HC1Q86WB0 502 aaKnown RBP19.38■□□□□ 0.69
SCARF1-206ENST00000573852 SCYL1Q96KG9 808 aa19.38■□□□□ 0.69
SCARF1-206ENST00000573852 MID2Q9UJV3 735 aa19.38■□□□□ 0.69
SCARF1-206ENST00000573852 AP4B1Q9Y6B7 739 aa19.38■□□□□ 0.69
SCARF1-206ENST00000573852 MAGEB16A2A368 324 aa19.38■□□□□ 0.69
SCARF1-206ENST00000573852 VILLO15195 856 aa19.38■□□□□ 0.69
SCARF1-206ENST00000573852 CABYRO75952 493 aa19.38■□□□□ 0.69
SCARF1-206ENST00000573852 APOA4P06727 396 aa19.38■□□□□ 0.69
SCARF1-206ENST00000573852 TPI1P60174 286 aa19.38■□□□□ 0.69
SCARF1-206ENST00000573852 PRKAA1Q13131 559 aa19.38■□□□□ 0.69
SCARF1-206ENST00000573852 ARMC3Q5W041 872 aa19.38■□□□□ 0.69
SCARF1-206ENST00000573852 LIMS2Q7Z4I7 341 aa19.38■□□□□ 0.69
SCARF1-206ENST00000573852 PGAM4Q8N0Y7 254 aa19.38■□□□□ 0.69
SCARF1-206ENST00000573852 RDH11Q8TC12 318 aa19.38■□□□□ 0.69
SCARF1-206ENST00000573852 TNIP3Q96KP6 325 aa19.38■□□□□ 0.69
SCARF1-206ENST00000573852 IL22Q9GZX6 179 aa19.38■□□□□ 0.69
SCARF1-206ENST00000573852 WDR41Q9HAD4 459 aa19.38■□□□□ 0.69
SCARF1-206ENST00000573852 LRRC4Q9HBW1 653 aa19.38■□□□□ 0.69
SCARF1-206ENST00000573852 WDR6Q9NNW5 1121 aaKnown RBP19.38■□□□□ 0.69
SCARF1-206ENST00000573852 RAB26Q9ULW5 256 aa19.38■□□□□ 0.69
SCARF1-206ENST00000573852 LZTS1Q9Y250 596 aa19.38■□□□□ 0.69
SCARF1-206ENST00000573852 NPR3P17342 541 aa19.37■□□□□ 0.69
SCARF1-206ENST00000573852 GABRB3P28472 473 aa19.37■□□□□ 0.69
SCARF1-206ENST00000573852 USP10Q14694 798 aaKnown RBP19.37■□□□□ 0.69
SCARF1-206ENST00000573852 ZFP1Q6P2D0 407 aa19.37■□□□□ 0.69
SCARF1-206ENST00000573852 PDZD4Q76G19 769 aaPredicted RBP19.37■□□□□ 0.69
SCARF1-206ENST00000573852 SULF1Q8IWU6 871 aa19.37■□□□□ 0.69
SCARF1-206ENST00000573852 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms