RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 STK3Q13188 491 aa7.15□□□□□ -1.26
CHD3-213ENST00000571249 C14orf28Q4W4Y0 310 aa7.15□□□□□ -1.26
CHD3-213ENST00000571249 RNF187Q5TA31 235 aaPredicted RBP7.15□□□□□ -1.26
CHD3-213ENST00000571249 CEP135Q66GS9 1140 aa7.15□□□□□ -1.26
CHD3-213ENST00000571249 KCNK18Q7Z418 384 aa7.15□□□□□ -1.26
CHD3-213ENST00000571249 TMEM135Q86UB9 458 aa7.15□□□□□ -1.26
CHD3-213ENST00000571249 SDR16C5Q8N3Y7 309 aa7.15□□□□□ -1.26
CHD3-213ENST00000571249 GPBAR1Q8TDU6 330 aa7.15□□□□□ -1.26
CHD3-213ENST00000571249 SNX29Q8TEQ0 813 aa7.15□□□□□ -1.26
CHD3-213ENST00000571249 CACTINQ8WUQ7 758 aaKnown RBP7.15□□□□□ -1.26
CHD3-213ENST00000571249 NDRG1Q92597 394 aaKnown RBP7.15□□□□□ -1.26
CHD3-213ENST00000571249 ALKBH8Q96BT7 664 aaKnown RBP7.15□□□□□ -1.26
CHD3-213ENST00000571249 FAM129BQ96TA1 746 aa7.15□□□□□ -1.26
CHD3-213ENST00000571249 SMR3AQ99954 134 aa7.15□□□□□ -1.26
CHD3-213ENST00000571249 MRPL45Q9BRJ2 306 aaKnown RBP7.15□□□□□ -1.26
CHD3-213ENST00000571249 BOCQ9BWV1 1114 aa7.15□□□□□ -1.26
CHD3-213ENST00000571249 SRRTQ9BXP5 876 aaKnown RBP7.15□□□□□ -1.26
CHD3-213ENST00000571249 CPEB1Q9BZB8 566 aaKnown RBP7.15□□□□□ -1.26
CHD3-213ENST00000571249 SLC29A3Q9BZD2 475 aa7.15□□□□□ -1.26
CHD3-213ENST00000571249 CDH19Q9H159 772 aa7.15□□□□□ -1.26
CHD3-213ENST00000571249 SNX25Q9H3E2 840 aa7.15□□□□□ -1.26
CHD3-213ENST00000571249 DPEP3Q9H4B8 488 aa7.15□□□□□ -1.26
CHD3-213ENST00000571249 BRMS1Q9HCU9 246 aa7.15□□□□□ -1.26
CHD3-213ENST00000571249 ABCB8Q9NUT2 735 aa7.15□□□□□ -1.26
CHD3-213ENST00000571249 COMMD8Q9NX08 183 aa7.15□□□□□ -1.26
CHD3-213ENST00000571249 SIX4Q9UIU6 781 aa7.15□□□□□ -1.26
CHD3-213ENST00000571249 GGA2Q9UJY4 613 aa7.15□□□□□ -1.26
CHD3-213ENST00000571249 ITGA11Q9UKX5 1188 aa7.15□□□□□ -1.26
CHD3-213ENST00000571249 AGO1Q9UL18 857 aaKnown RBP7.15□□□□□ -1.26
CHD3-213ENST00000571249 PADI4Q9UM07 663 aa7.15□□□□□ -1.26
CHD3-213ENST00000571249 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.15□□□□□ -1.26
CHD3-213ENST00000571249 MRPS18BQ9Y676 258 aaKnown RBP7.15□□□□□ -1.26
CHD3-213ENST00000571249 NBEAL2Q6ZNJ1 2754 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 K7ENM7 598 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 AQP9O43315 295 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 PPP6R2O75170 966 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 GCATO75600 419 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 PABPC1P11940 636 aaKnown RBP7.14□□□□□ -1.27
CHD3-213ENST00000571249 BPIP17213 487 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 POLR2EP19388 210 aaKnown RBP7.14□□□□□ -1.27
CHD3-213ENST00000571249 KLK2P20151 261 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 C5AR1P21730 350 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 ITGA3P26006 1051 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 HSD3B2P26439 372 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 EIF1AXP47813 144 aaKnown RBP7.14□□□□□ -1.27
CHD3-213ENST00000571249 ST8SIA6P61647 398 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 POU5F1Q01860 360 aaKnown RBP7.14□□□□□ -1.27
CHD3-213ENST00000571249 AKAP6Q13023 2319 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 C1orf61Q13536 156 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 TOB2Q14106 344 aaPredicted RBP7.14□□□□□ -1.27
CHD3-213ENST00000571249 PTK2BQ14289 1009 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 C16orf72Q14CZ0 275 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 ZNF174Q15697 407 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 ARHGAP44Q17R89 818 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 HNRNPA1L2Q32P51 320 aaKnown RBP7.14□□□□□ -1.27
CHD3-213ENST00000571249 SETMARQ53H47 684 aaPredicted RBP7.14□□□□□ -1.27
CHD3-213ENST00000571249 C10orf120Q5SQS8 335 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 C9orf64Q5T6V5 341 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 TMEM198Q66K66 360 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 OR6B2Q6IFH4 312 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 ZNF517Q6ZMY9 492 aaPredicted RBP7.14□□□□□ -1.27
CHD3-213ENST00000571249 DENND1CQ8IV53 801 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 AHI1Q8N157 1196 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 NAGSQ8N159 534 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 Q8N9G6 341 aaPredicted RBP7.14□□□□□ -1.27
CHD3-213ENST00000571249 LMX1AQ8TE12 382 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 SCG3Q8WXD2 468 aaKnown RBP7.14□□□□□ -1.27
CHD3-213ENST00000571249 KCNN1Q92952 543 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 NAT6Q93015 286 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 CCDC74AQ96AQ1 378 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 THAP11Q96EK4 314 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 IFT43Q96FT9 208 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 MYO19Q96H55 970 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 HPDLQ96IR7 371 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 FRMD6Q96NE9 622 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 TMEM74Q96NL1 305 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 CMKLR1Q99788 373 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 MED10Q9BTT4 135 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 DCLK3Q9C098 648 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 BRINP2Q9C0B6 783 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 TCEAL2Q9H3H9 227 aaPredicted RBP7.14□□□□□ -1.27
CHD3-213ENST00000571249 GPN2Q9H9Y4 310 aaPredicted RBP7.14□□□□□ -1.27
CHD3-213ENST00000571249 NMUR1Q9HB89 426 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 DMAP1Q9NPF5 467 aaPredicted RBP7.14□□□□□ -1.27
CHD3-213ENST00000571249 ASF1BQ9NVP2 202 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 LARSQ9P2J5 1176 aaKnown RBP7.14□□□□□ -1.27
CHD3-213ENST00000571249 GULP1Q9UBP9 304 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 RPH3AQ9Y2J0 694 aaPredicted RBP7.14□□□□□ -1.27
CHD3-213ENST00000571249 NEU2Q9Y3R4 380 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 R3HCC1Q9Y3T6 440 aaKnown RBP7.14□□□□□ -1.27
CHD3-213ENST00000571249 PCDHGB6Q9Y5F9 930 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 B3GALT1Q9Y5Z6 326 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 CSNK1G3Q9Y6M4 447 aa7.14□□□□□ -1.27
CHD3-213ENST00000571249 A0A1W2PQH9 124 aa7.13□□□□□ -1.27
CHD3-213ENST00000571249 GOLGA6L22H0YM25 854 aa7.13□□□□□ -1.27
CHD3-213ENST00000571249 GRID2O43424 1007 aa7.13□□□□□ -1.27
CHD3-213ENST00000571249 FZD6O60353 706 aa7.13□□□□□ -1.27
CHD3-213ENST00000571249 RAD1O60671 282 aa7.13□□□□□ -1.27
CHD3-213ENST00000571249 RNGTTO60942 597 aaKnown RBP7.13□□□□□ -1.27
CHD3-213ENST00000571249 ADH1BP00325 375 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms