RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 WDR36Q8NI36 951 aaKnown RBP12.8□□□□□ -0.36
SNX29-207ENST00000568949 NOX5Q96PH1 765 aa12.8□□□□□ -0.36
SNX29-207ENST00000568949 CCNL2Q96S94 520 aaPredicted RBP12.8□□□□□ -0.36
SNX29-207ENST00000568949 FEM1AQ9BSK4 669 aa12.8□□□□□ -0.36
SNX29-207ENST00000568949 FZD3Q9NPG1 666 aa12.8□□□□□ -0.36
SNX29-207ENST00000568949 GPR27Q9NS67 375 aa12.8□□□□□ -0.36
SNX29-207ENST00000568949 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.8□□□□□ -0.36
SNX29-207ENST00000568949 DNAJC28Q9NX36 388 aa12.8□□□□□ -0.36
SNX29-207ENST00000568949 SALL4Q9UJQ4 1053 aa12.8□□□□□ -0.36
SNX29-207ENST00000568949 FARP1Q9Y4F1 1045 aaPredicted RBP12.8□□□□□ -0.36
SNX29-207ENST00000568949 HS3ST3A1Q9Y663 406 aa12.8□□□□□ -0.36
SNX29-207ENST00000568949 TLN1Q9Y490 2541 aaKnown RBP12.79□□□□□ -0.36
SNX29-207ENST00000568949 CPED1A4D0V7 1026 aa12.79□□□□□ -0.36
SNX29-207ENST00000568949 KCNU1A8MYU2 1149 aa12.79□□□□□ -0.36
SNX29-207ENST00000568949 H3BM21 787 aa12.79□□□□□ -0.36
SNX29-207ENST00000568949 RNF225M0QZC1 329 aaPredicted RBP12.79□□□□□ -0.36
SNX29-207ENST00000568949 TERTO14746 1132 aaKnown RBP12.79□□□□□ -0.36
SNX29-207ENST00000568949 TPP1O14773 563 aa12.79□□□□□ -0.36
SNX29-207ENST00000568949 NEBLO76041 1014 aa12.79□□□□□ -0.36
SNX29-207ENST00000568949 TRUB2O95900 331 aaKnown RBP12.79□□□□□ -0.36
SNX29-207ENST00000568949 CSF2P04141 144 aa12.79□□□□□ -0.36
SNX29-207ENST00000568949 SLC2A3P11169 496 aa12.79□□□□□ -0.36
SNX29-207ENST00000568949 NME1P15531 152 aaKnown RBP12.79□□□□□ -0.36
SNX29-207ENST00000568949 BRD2P25440 801 aaKnown RBP12.79□□□□□ -0.36
SNX29-207ENST00000568949 ACADSBP45954 432 aa12.79□□□□□ -0.36
SNX29-207ENST00000568949 NUMBP49757 651 aa12.79□□□□□ -0.36
SNX29-207ENST00000568949 CLDN2P57739 230 aa12.79□□□□□ -0.36
SNX29-207ENST00000568949 LRMPQ12912 555 aa12.79□□□□□ -0.36
SNX29-207ENST00000568949 EIF4EBP2Q13542 120 aaPredicted RBP12.79□□□□□ -0.36
SNX29-207ENST00000568949 CDKN3Q16667 212 aa12.79□□□□□ -0.36
SNX29-207ENST00000568949 ZNF542PQ5EBM4 170 aa12.79□□□□□ -0.36
SNX29-207ENST00000568949 GUSBP11Q6P575 273 aa12.79□□□□□ -0.36
SNX29-207ENST00000568949 KYAT3Q6YP21 454 aaKnown RBP12.79□□□□□ -0.36
SNX29-207ENST00000568949 EFL1Q7Z2Z2 1120 aaKnown RBP12.79□□□□□ -0.36
SNX29-207ENST00000568949 CIR1Q86X95 450 aaPredicted RBP12.79□□□□□ -0.36
SNX29-207ENST00000568949 SH2D3CQ8N5H7 860 aa12.79□□□□□ -0.36
SNX29-207ENST00000568949 EXD3Q8N9H8 876 aa12.79□□□□□ -0.36
SNX29-207ENST00000568949 ZNF548Q8NEK5 533 aaPredicted RBP12.79□□□□□ -0.36
SNX29-207ENST00000568949 WDR48Q8TAF3 677 aa12.79□□□□□ -0.36
SNX29-207ENST00000568949 RNF34Q969K3 372 aa12.79□□□□□ -0.36
SNX29-207ENST00000568949 BMFQ96LC9 184 aa12.79□□□□□ -0.36
SNX29-207ENST00000568949 CCDC114Q96M63 670 aa12.79□□□□□ -0.36
SNX29-207ENST00000568949 SRRTQ9BXP5 876 aaKnown RBP12.79□□□□□ -0.36
SNX29-207ENST00000568949 CAAP1Q9H8G2 361 aa12.79□□□□□ -0.36
SNX29-207ENST00000568949 ATXN7L1Q9ULK2 861 aaPredicted RBP12.79□□□□□ -0.36
SNX29-207ENST00000568949 ZFR2Q9UPR6 939 aaKnown RBP12.79□□□□□ -0.36
SNX29-207ENST00000568949 HS3ST2Q9Y278 367 aa12.79□□□□□ -0.36
SNX29-207ENST00000568949 PCDHB4Q9Y5E5 795 aa12.79□□□□□ -0.36
SNX29-207ENST00000568949 OR51B4Q9Y5P0 310 aa12.79□□□□□ -0.36
SNX29-207ENST00000568949 CCDC187A0A096LP49 1063 aa12.78□□□□□ -0.36
SNX29-207ENST00000568949 SPTY2D1-AS1A0A0U1RR47 76 aa12.78□□□□□ -0.36
SNX29-207ENST00000568949 KPNA3O00505 521 aaPredicted RBP12.78□□□□□ -0.36
SNX29-207ENST00000568949 SLC16A3O15427 465 aaKnown RBP12.78□□□□□ -0.36
SNX29-207ENST00000568949 TNFSF15O95150 251 aa12.78□□□□□ -0.36
SNX29-207ENST00000568949 PCDH8O95206 1070 aa12.78□□□□□ -0.36
SNX29-207ENST00000568949 CTSLP07711 333 aa12.78□□□□□ -0.36
SNX29-207ENST00000568949 ITGA2BP08514 1039 aa12.78□□□□□ -0.36
SNX29-207ENST00000568949 KRT10P13645 584 aa12.78□□□□□ -0.36
SNX29-207ENST00000568949 CHRNA3P32297 505 aa12.78□□□□□ -0.36
SNX29-207ENST00000568949 GPD2P43304 727 aa12.78□□□□□ -0.36
SNX29-207ENST00000568949 SYKP43405 635 aa12.78□□□□□ -0.36
SNX29-207ENST00000568949 MTA1Q13330 715 aa12.78□□□□□ -0.36
SNX29-207ENST00000568949 FZD2Q14332 565 aa12.78□□□□□ -0.36
SNX29-207ENST00000568949 ZSCAN23Q3MJ62 389 aa12.78□□□□□ -0.36
SNX29-207ENST00000568949 LINC00303Q3SY05 128 aa12.78□□□□□ -0.36
SNX29-207ENST00000568949 TMEM259Q4ZIN3 620 aa12.78□□□□□ -0.36
SNX29-207ENST00000568949 FBXL22Q6P050 247 aa12.78□□□□□ -0.36
SNX29-207ENST00000568949 ATG14Q6ZNE5 492 aa12.78□□□□□ -0.36
SNX29-207ENST00000568949 ERN2Q76MJ5 926 aaKnown RBP12.78□□□□□ -0.36
SNX29-207ENST00000568949 PTAR1Q7Z6K3 402 aaPredicted RBP12.78□□□□□ -0.36
SNX29-207ENST00000568949 LURAP1LQ8IV03 231 aa12.78□□□□□ -0.36
SNX29-207ENST00000568949 OR52K2Q8NGK3 314 aa12.78□□□□□ -0.36
SNX29-207ENST00000568949 STK32AQ8WU08 396 aa12.78□□□□□ -0.36
SNX29-207ENST00000568949 ARRDC3Q96B67 414 aa12.78□□□□□ -0.36
SNX29-207ENST00000568949 NT5C1BQ96P26 610 aa12.78□□□□□ -0.36
SNX29-207ENST00000568949 HDAC8Q9BY41 377 aa12.78□□□□□ -0.36
SNX29-207ENST00000568949 POPDC2Q9HBU9 364 aa12.78□□□□□ -0.36
SNX29-207ENST00000568949 DYRK4Q9NR20 520 aa12.78□□□□□ -0.36
SNX29-207ENST00000568949 STARD5Q9NSY2 213 aa12.78□□□□□ -0.36
SNX29-207ENST00000568949 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.78□□□□□ -0.36
SNX29-207ENST00000568949 VPS28Q9UK41 221 aa12.78□□□□□ -0.36
SNX29-207ENST00000568949 FAM237AA0A1B0GTK4 181 aa12.77□□□□□ -0.37
SNX29-207ENST00000568949 EFSO43281 561 aa12.77□□□□□ -0.37
SNX29-207ENST00000568949 AQP9O43315 295 aa12.77□□□□□ -0.37
SNX29-207ENST00000568949 BNIP3LO60238 219 aa12.77□□□□□ -0.37
SNX29-207ENST00000568949 PRNPP04156 253 aa12.77□□□□□ -0.37
SNX29-207ENST00000568949 ITGB2P05107 769 aa12.77□□□□□ -0.37
SNX29-207ENST00000568949 RABIFP47224 123 aa12.77□□□□□ -0.37
SNX29-207ENST00000568949 RPIAP49247 311 aa12.77□□□□□ -0.37
SNX29-207ENST00000568949 YWHAZP63104 245 aaKnown RBP12.77□□□□□ -0.37
SNX29-207ENST00000568949 DNM1Q05193 864 aaKnown RBP12.77□□□□□ -0.37
SNX29-207ENST00000568949 NR0B2Q15466 257 aa12.77□□□□□ -0.37
SNX29-207ENST00000568949 SEL1L3Q68CR1 1132 aa12.77□□□□□ -0.37
SNX29-207ENST00000568949 OR6B2Q6IFH4 312 aa12.77□□□□□ -0.37
SNX29-207ENST00000568949 PARGQ86W56 976 aa12.77□□□□□ -0.37
SNX29-207ENST00000568949 OR2A12Q8NGT7 310 aa12.77□□□□□ -0.37
SNX29-207ENST00000568949 NAT6Q93015 286 aa12.77□□□□□ -0.37
SNX29-207ENST00000568949 SLC35C1Q96A29 364 aa12.77□□□□□ -0.37
SNX29-207ENST00000568949 RPRD1AQ96P16 312 aaPredicted RBP12.77□□□□□ -0.37
SNX29-207ENST00000568949 MED15Q96RN5 788 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms