RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 ANKRD62A6NC57 917 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 SIGLEC16A6NMB1 481 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 SMTNL1A8MU46 457 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 C10orf142B7Z368 130 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 VILLO15195 856 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 FLRT2O43155 660 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 LATO43561 262 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 PLRG1O43660 514 aaKnown RBP4.9□□□□□ -1.63
CLK3-219ENST00000567805 SH3BP5O60239 455 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 DFNA5O60443 496 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 SRGAP2O75044 1071 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 TRIM16O95361 564 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 KRT3P12035 628 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 SRCP12931 536 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 ATP1A3P13637 1013 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 FERP16591 822 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 ADRA1BP35368 520 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 DRD3P35462 400 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 NUDT1P36639 197 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 ETFBP38117 255 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 CSNK1EP49674 416 aaKnown RBP4.9□□□□□ -1.63
CLK3-219ENST00000567805 CCR5P51681 352 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 SIM1P81133 766 aaPredicted RBP4.9□□□□□ -1.63
CLK3-219ENST00000567805 BNC1Q01954 994 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 KCNC4Q03721 635 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 CCDC15Q0P6D6 951 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 FOXC1Q12948 553 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 TRIP6Q15654 476 aaKnown RBP4.9□□□□□ -1.63
CLK3-219ENST00000567805 DLG2Q15700 870 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 CDO1Q16878 200 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 ZNF423Q2M1K9 1284 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 C15orf59Q2T9L4 293 aaPredicted RBP4.9□□□□□ -1.63
CLK3-219ENST00000567805 KIF19Q2TAC6 998 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 HLA-BQ31612 363 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 CCDC14Q49A88 953 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 FILIP1LQ4L180 1135 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 ARTNQ5T4W7 220 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 PPP1R2P3Q6NXS1 205 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 CAVIN1Q6NZI2 390 aaKnown RBP4.9□□□□□ -1.63
CLK3-219ENST00000567805 DBX2Q6ZNG2 339 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 Q6ZVU0 165 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 MON1BQ7L1V2 547 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 TFAP2DQ7Z6R9 452 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 ADAT2Q7Z6V5 191 aaKnown RBP4.9□□□□□ -1.63
CLK3-219ENST00000567805 GLRX5Q86SX6 157 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 DCAF4L2Q8NA75 395 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 ATP11CQ8NB49 1132 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 C3orf20Q8ND61 904 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 OR14C36Q8NHC7 312 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 JOSD2Q8TAC2 188 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 PIP4K2CQ8TBX8 421 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 FAM172AQ8WUF8 416 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 RXFP2Q8WXD0 754 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 CENPIQ92674 756 aaPredicted RBP4.9□□□□□ -1.63
CLK3-219ENST00000567805 FAM131CQ96AQ9 280 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 SKA1Q96BD8 255 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 PCDHB18PQ96TA0 734 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 AGPAT1Q99943 283 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 ORAI3Q9BRQ5 295 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 SELENOOQ9BVL4 669 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 ACE2Q9BYF1 805 aaPredicted RBP4.9□□□□□ -1.63
CLK3-219ENST00000567805 OSBPL2Q9H1P3 480 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 IL21RQ9HBE5 538 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 PREBQ9HCU5 417 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 TMPRSS4Q9NRS4 437 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 TM7SF3Q9NS93 570 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 SEPT11Q9NVA2 429 aaKnown RBP4.9□□□□□ -1.63
CLK3-219ENST00000567805 MPP6Q9NZW5 540 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 ZNF212Q9UDV6 495 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 OR12D3Q9UGF7 316 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 VPS51Q9UID3 782 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 SARDHQ9UL12 918 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 PPM1HQ9ULR3 514 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 MYO6Q9UM54 1294 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 ANKRD6Q9Y2G4 727 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 FNDC3AQ9Y2H6 1198 aaKnown RBP4.9□□□□□ -1.63
CLK3-219ENST00000567805 PCDHB9Q9Y5E1 797 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 SNX11Q9Y5W9 270 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 SNX10Q9Y5X0 201 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 SLCO1B1Q9Y6L6 691 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 PLXNB3Q9ULL4 1909 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 TRPM6Q9BX84 2022 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 NBEAQ8NFP9 2946 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 TBC1D3DA0A087WVF3 549 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 TBC1D3IA0A087WXS9 549 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 TBC1D3EA0A087X179 549 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 TBC1D3KA0A087X1G2 549 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 SPAARA0A1B0GVQ0 90 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 A0A1W2PQC6 194 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 TCRBV5S1A1TA0A578 114 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 TBC1D3FA6NER0 549 aaPredicted RBP4.89□□□□□ -1.63
CLK3-219ENST00000567805 TBC1D3LB9A6J9 549 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 K7ERQ8 282 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 CBX4O00257 560 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 TEX33O43247 280 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 BNIP3LO60238 219 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 PCDHGA12O60330 932 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 SNAP91O60641 907 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 CBFA2T3O75081 653 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 GJB6O95452 261 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms