RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 VAV1P15498 845 aa20.31■□□□□ 0.84
CMTM3-211ENST00000565922 GOT1P17174 413 aa20.31■□□□□ 0.84
CMTM3-211ENST00000565922 ENGP17813 658 aa20.31■□□□□ 0.84
CMTM3-211ENST00000565922 EPHB2P29323 1055 aa20.31■□□□□ 0.84
CMTM3-211ENST00000565922 ACAP1Q15027 740 aa20.31■□□□□ 0.84
CMTM3-211ENST00000565922 TSR1Q2NL82 804 aaKnown RBP20.31■□□□□ 0.84
CMTM3-211ENST00000565922 FAM72AQ5TYM5 149 aa20.31■□□□□ 0.84
CMTM3-211ENST00000565922 FAM72DQ6L9T8 149 aa20.31■□□□□ 0.84
CMTM3-211ENST00000565922 FAM72BQ86X60 149 aa20.31■□□□□ 0.84
CMTM3-211ENST00000565922 HDDC3Q8N4P3 179 aa20.31■□□□□ 0.84
CMTM3-211ENST00000565922 SNX19Q92543 992 aa20.31■□□□□ 0.84
CMTM3-211ENST00000565922 CEP44Q9C0F1 390 aa20.31■□□□□ 0.84
CMTM3-211ENST00000565922 CAPN10Q9HC96 672 aa20.31■□□□□ 0.84
CMTM3-211ENST00000565922 MYO1AQ9UBC5 1043 aa20.31■□□□□ 0.84
CMTM3-211ENST00000565922 DNAI1Q9UI46 699 aa20.31■□□□□ 0.84
CMTM3-211ENST00000565922 NEU3Q9UQ49 428 aa20.31■□□□□ 0.84
CMTM3-211ENST00000565922 CREB3O43889 395 aa20.3■□□□□ 0.84
CMTM3-211ENST00000565922 PRPSAP2O60256 369 aa20.3■□□□□ 0.84
CMTM3-211ENST00000565922 HNRNPH3P31942 346 aaKnown RBP20.3■□□□□ 0.84
CMTM3-211ENST00000565922 SERPINH1P50454 418 aaKnown RBP20.3■□□□□ 0.84
CMTM3-211ENST00000565922 CCDC15Q0P6D6 951 aa20.3■□□□□ 0.84
CMTM3-211ENST00000565922 POLD3Q15054 466 aaPredicted RBP20.3■□□□□ 0.84
CMTM3-211ENST00000565922 C22orf39Q6P5X5 142 aa20.3■□□□□ 0.84
CMTM3-211ENST00000565922 RTL3Q8N8U3 475 aaKnown RBP20.3■□□□□ 0.84
CMTM3-211ENST00000565922 ACE2Q9BYF1 805 aaPredicted RBP20.3■□□□□ 0.84
CMTM3-211ENST00000565922 ZDHHC5Q9C0B5 715 aa20.3■□□□□ 0.84
CMTM3-211ENST00000565922 MIR1-1HGQ9H1L0 117 aa20.3■□□□□ 0.84
CMTM3-211ENST00000565922 C6orf106Q9H6K1 298 aaPredicted RBP20.3■□□□□ 0.84
CMTM3-211ENST00000565922 ZNHIT6Q9NWK9 470 aaKnown RBP20.3■□□□□ 0.84
CMTM3-211ENST00000565922 AP4E1Q9UPM8 1137 aa20.3■□□□□ 0.84
CMTM3-211ENST00000565922 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.3■□□□□ 0.84
CMTM3-211ENST00000565922 PLXNA2O75051 1894 aa20.3■□□□□ 0.84
CMTM3-211ENST00000565922 ZSCAN5CA6NGD5 496 aaPredicted RBP20.29■□□□□ 0.84
CMTM3-211ENST00000565922 C4orf47A7E2U8 309 aa20.29■□□□□ 0.84
CMTM3-211ENST00000565922 BCAT2O15382 392 aaPredicted RBP20.29■□□□□ 0.84
CMTM3-211ENST00000565922 SLC7A4O43246 635 aa20.29■□□□□ 0.84
CMTM3-211ENST00000565922 BNIP3LO60238 219 aa20.29■□□□□ 0.84
CMTM3-211ENST00000565922 MT-CO1P00395 513 aa20.29■□□□□ 0.84
CMTM3-211ENST00000565922 MAOBP27338 520 aa20.29■□□□□ 0.84
CMTM3-211ENST00000565922 ZNF135P52742 658 aaPredicted RBP20.29■□□□□ 0.84
CMTM3-211ENST00000565922 YBEYP58557 167 aaPredicted RBP20.29■□□□□ 0.84
CMTM3-211ENST00000565922 TPI1P60174 286 aa20.29■□□□□ 0.84
CMTM3-211ENST00000565922 SEMA3BQ13214 749 aa20.29■□□□□ 0.84
CMTM3-211ENST00000565922 ERMARDQ5T6L9 678 aa20.29■□□□□ 0.84
CMTM3-211ENST00000565922 ALKBH5Q6P6C2 394 aaKnown RBP20.29■□□□□ 0.84
CMTM3-211ENST00000565922 LINGO4Q6UY18 593 aa20.29■□□□□ 0.84
CMTM3-211ENST00000565922 DNAAF5Q86Y56 855 aa20.29■□□□□ 0.84
CMTM3-211ENST00000565922 PSTKQ8IV42 348 aaKnown RBP20.29■□□□□ 0.84
CMTM3-211ENST00000565922 PYROXD2Q8N2H3 581 aa20.29■□□□□ 0.84
CMTM3-211ENST00000565922 ZCCHC9Q8N567 271 aaKnown RBP20.29■□□□□ 0.84
CMTM3-211ENST00000565922 PCDH20Q8N6Y1 951 aaKnown RBP20.29■□□□□ 0.84
CMTM3-211ENST00000565922 OR8K1Q8NGG5 319 aa20.29■□□□□ 0.84
CMTM3-211ENST00000565922 OR2T34Q8NGX1 318 aa20.29■□□□□ 0.84
CMTM3-211ENST00000565922 ARHGEF2Q92974 986 aaKnown RBP20.29■□□□□ 0.84
CMTM3-211ENST00000565922 NEUROG2Q9H2A3 272 aa20.29■□□□□ 0.84
CMTM3-211ENST00000565922 KDM4CQ9H3R0 1056 aa20.29■□□□□ 0.84
CMTM3-211ENST00000565922 EIF2B4Q9UI10 523 aaKnown RBP20.29■□□□□ 0.84
CMTM3-211ENST00000565922 PPM1HQ9ULR3 514 aa20.29■□□□□ 0.84
CMTM3-211ENST00000565922 A0A087X0T9 212 aa20.28■□□□□ 0.84
CMTM3-211ENST00000565922 WASH4PA8MWX3 477 aa20.28■□□□□ 0.84
CMTM3-211ENST00000565922 ARHGAP33O14559 1287 aa20.28■□□□□ 0.84
CMTM3-211ENST00000565922 ZMPSTE24O75844 475 aa20.28■□□□□ 0.84
CMTM3-211ENST00000565922 FSBPO95073 299 aa20.28■□□□□ 0.84
CMTM3-211ENST00000565922 PRNPP04156 253 aa20.28■□□□□ 0.84
CMTM3-211ENST00000565922 FAM228BP0C875 321 aa20.28■□□□□ 0.84
CMTM3-211ENST00000565922 GLDCP23378 1020 aa20.28■□□□□ 0.84
CMTM3-211ENST00000565922 ARF5P84085 180 aa20.28■□□□□ 0.84
CMTM3-211ENST00000565922 CCDC122Q5T0U0 273 aa20.28■□□□□ 0.84
CMTM3-211ENST00000565922 KIAA0895LQ68EN5 471 aa20.28■□□□□ 0.84
CMTM3-211ENST00000565922 ZNF354CQ86Y25 554 aa20.28■□□□□ 0.84
CMTM3-211ENST00000565922 VSTM4Q8IW00 320 aa20.28■□□□□ 0.84
CMTM3-211ENST00000565922 AADATQ8N5Z0 425 aa20.28■□□□□ 0.84
CMTM3-211ENST00000565922 PIP4K2CQ8TBX8 421 aa20.28■□□□□ 0.84
CMTM3-211ENST00000565922 BIRC7Q96CA5 298 aa20.28■□□□□ 0.84
CMTM3-211ENST00000565922 OSGEPQ9NPF4 335 aa20.28■□□□□ 0.84
CMTM3-211ENST00000565922 NDFIP2Q9NV92 336 aa20.28■□□□□ 0.84
CMTM3-211ENST00000565922 ARHGAP20Q9P2F6 1191 aa20.28■□□□□ 0.84
CMTM3-211ENST00000565922 SERGEFQ9UGK8 458 aa20.28■□□□□ 0.84
CMTM3-211ENST00000565922 DCDC2BA2VCK2 349 aa20.27■□□□□ 0.84
CMTM3-211ENST00000565922 FAM47DPA6NHR8 397 aa20.27■□□□□ 0.84
CMTM3-211ENST00000565922 CDX4O14627 284 aaPredicted RBP20.27■□□□□ 0.84
CMTM3-211ENST00000565922 CD27P26842 260 aa20.27■□□□□ 0.84
CMTM3-211ENST00000565922 MIPP30301 263 aa20.27■□□□□ 0.84
CMTM3-211ENST00000565922 CHRNA3P32297 505 aa20.27■□□□□ 0.84
CMTM3-211ENST00000565922 PCK1P35558 622 aa20.27■□□□□ 0.84
CMTM3-211ENST00000565922 MAPK8P45983 427 aa20.27■□□□□ 0.84
CMTM3-211ENST00000565922 GALCP54803 685 aa20.27■□□□□ 0.84
CMTM3-211ENST00000565922 ADPRHP54922 357 aa20.27■□□□□ 0.84
CMTM3-211ENST00000565922 ZNF252P-AS1Q0IIN9 211 aa20.27■□□□□ 0.84
CMTM3-211ENST00000565922 PIGHQ14442 188 aaPredicted RBP20.27■□□□□ 0.84
CMTM3-211ENST00000565922 TEAD4Q15561 434 aa20.27■□□□□ 0.84
CMTM3-211ENST00000565922 PARP15Q460N3 678 aa20.27■□□□□ 0.84
CMTM3-211ENST00000565922 TMIEQ8NEW7 156 aa20.27■□□□□ 0.84
CMTM3-211ENST00000565922 OR2A12Q8NGT7 310 aa20.27■□□□□ 0.84
CMTM3-211ENST00000565922 OR14C36Q8NHC7 312 aa20.27■□□□□ 0.84
CMTM3-211ENST00000565922 CASKIN2Q8WXE0 1202 aa20.27■□□□□ 0.84
CMTM3-211ENST00000565922 FAM131CQ96AQ9 280 aa20.27■□□□□ 0.84
CMTM3-211ENST00000565922 ISG20Q96AZ6 181 aaKnown RBP20.27■□□□□ 0.84
CMTM3-211ENST00000565922 PPP1R16AQ96I34 528 aa20.27■□□□□ 0.84
CMTM3-211ENST00000565922 DNAJC7Q99615 494 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms