RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 TIRAPP58753 221 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 CCNA1P78396 465 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 TDGQ13569 410 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 ATP1A4Q13733 1029 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 TMEM31Q5JXX7 168 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 DNTTIP2Q5QJE6 756 aaKnown RBP4.57□□□□□ -1.68
LINC00561-201ENST00000565815 Q6ZNX1 250 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 AMIGO2Q86SJ2 522 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 SIMC1Q8NDZ2 872 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 AFG1LQ8WV93 481 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 RUBCNQ92622 972 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 LPAR1Q92633 364 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 FUBP1Q96AE4 644 aaKnown RBP4.57□□□□□ -1.68
LINC00561-201ENST00000565815 KRTAP9-9Q9BYP9 154 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 KRTAP9-4Q9BYQ2 154 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 SCAND2PQ9GZW5 306 aaPredicted RBP4.57□□□□□ -1.68
LINC00561-201ENST00000565815 FAM83DQ9H4H8 585 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 ZBTB26Q9HCK0 441 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 GJD2Q9UKL4 321 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 COG5Q9UP83 839 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 AFG3L2Q9Y4W6 797 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 LRRFIP2Q9Y608 721 aaKnown RBP4.57□□□□□ -1.68
LINC00561-201ENST00000565815 GRID2IPA4D2P6 1211 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 RRN3P2A6NIE6 340 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 AGAP5A6NIR3 686 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 KIF2AO00139 706 aaPredicted RBP4.57□□□□□ -1.68
LINC00561-201ENST00000565815 PMPCBO75439 489 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 ADCY5O95622 1261 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 RXRAP19793 462 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 CXCR5P32302 372 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 MPLP40238 635 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 ZRSR2Q15696 482 aaKnown RBP4.57□□□□□ -1.68
LINC00561-201ENST00000565815 CCDC57Q2TAC2 916 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 ATL3Q6DD88 541 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 GALNT15Q8N3T1 639 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 LINS1Q8NG48 757 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 KIAA1524Q8TCG1 905 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 NPIPB3Q92617 1050 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 UBXN10Q96LJ8 280 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 CDK5RAP1Q96SZ6 601 aaKnown RBP4.57□□□□□ -1.68
LINC00561-201ENST00000565815 RTKNQ9BST9 563 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 LSG1Q9H089 658 aaKnown RBP4.57□□□□□ -1.68
LINC00561-201ENST00000565815 TTYH1Q9H313 450 aaPredicted RBP4.57□□□□□ -1.68
LINC00561-201ENST00000565815 KLC4Q9NSK0 619 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 HMG20BQ9P0W2 317 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 ADAM21Q9UKJ8 722 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 NEU2Q9Y3R4 380 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 PAXBP1Q9Y5B6 917 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 UTYO14607 1347 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 PIPSLA2A3N6 862 aa4.56□□□□□ -1.68
LINC00561-201ENST00000565815 C19orf81C9J6K1 198 aa4.56□□□□□ -1.68
LINC00561-201ENST00000565815 KBTBD13C9JR72 458 aa4.56□□□□□ -1.68
LINC00561-201ENST00000565815 MATN3O15232 486 aa4.56□□□□□ -1.68
LINC00561-201ENST00000565815 CTAGE5O15320 804 aa4.56□□□□□ -1.68
LINC00561-201ENST00000565815 CTIFO43310 598 aaKnown RBP4.56□□□□□ -1.68
LINC00561-201ENST00000565815 PROM1O43490 865 aa4.56□□□□□ -1.68
LINC00561-201ENST00000565815 DIO1P49895 249 aa4.56□□□□□ -1.68
LINC00561-201ENST00000565815 AP2B1P63010 937 aa4.56□□□□□ -1.68
LINC00561-201ENST00000565815 ITIH3Q06033 890 aa4.56□□□□□ -1.68
LINC00561-201ENST00000565815 DMTNQ08495 405 aa4.56□□□□□ -1.68
LINC00561-201ENST00000565815 GAB1Q13480 694 aa4.56□□□□□ -1.68
LINC00561-201ENST00000565815 PDCD2Q16342 344 aaPredicted RBP4.56□□□□□ -1.68
LINC00561-201ENST00000565815 ANKRD40Q6AI12 368 aa4.56□□□□□ -1.68
LINC00561-201ENST00000565815 NAPRTQ6XQN6 538 aa4.56□□□□□ -1.68
LINC00561-201ENST00000565815 RBM43Q6ZSC3 357 aaKnown RBP4.56□□□□□ -1.68
LINC00561-201ENST00000565815 GGNQ86UU5 652 aa4.56□□□□□ -1.68
LINC00561-201ENST00000565815 ZKSCAN4Q969J2 545 aaPredicted RBP4.56□□□□□ -1.68
LINC00561-201ENST00000565815 PRRX2Q99811 253 aa4.56□□□□□ -1.68
LINC00561-201ENST00000565815 DPCDQ9BVM2 203 aaPredicted RBP4.56□□□□□ -1.68
LINC00561-201ENST00000565815 BRD8Q9H0E9 1235 aa4.56□□□□□ -1.68
LINC00561-201ENST00000565815 ELAC1Q9H777 363 aaKnown RBP4.56□□□□□ -1.68
LINC00561-201ENST00000565815 USP22Q9UPT9 525 aa4.56□□□□□ -1.68
LINC00561-201ENST00000565815 CYP46A1Q9Y6A2 500 aa4.56□□□□□ -1.68
LINC00561-201ENST00000565815 PFASO15067 1338 aa4.56□□□□□ -1.68
LINC00561-201ENST00000565815 SPEF2Q9C093 1822 aa4.56□□□□□ -1.68
LINC00561-201ENST00000565815 CCDC187A0A096LP49 1063 aa4.56□□□□□ -1.68
LINC00561-201ENST00000565815 OR2W5A6NFC9 320 aa4.56□□□□□ -1.68
LINC00561-201ENST00000565815 SLC15A5A6NIM6 579 aa4.56□□□□□ -1.68
LINC00561-201ENST00000565815 ZNF213O14771 459 aa4.56□□□□□ -1.68
LINC00561-201ENST00000565815 PEX1O43933 1283 aa4.56□□□□□ -1.68
LINC00561-201ENST00000565815 WDR47O94967 919 aa4.56□□□□□ -1.68
LINC00561-201ENST00000565815 INMTO95050 263 aa4.56□□□□□ -1.68
LINC00561-201ENST00000565815 ZNF202O95125 648 aa4.56□□□□□ -1.68
LINC00561-201ENST00000565815 CYP2D6P10635 497 aa4.56□□□□□ -1.68
LINC00561-201ENST00000565815 LYL1P12980 280 aa4.56□□□□□ -1.68
LINC00561-201ENST00000565815 SYT1P21579 422 aa4.56□□□□□ -1.68
LINC00561-201ENST00000565815 HOXA7P31268 230 aaPredicted RBP4.56□□□□□ -1.68
LINC00561-201ENST00000565815 PTGS2P35354 604 aa4.56□□□□□ -1.68
LINC00561-201ENST00000565815 KRT32Q14532 448 aa4.56□□□□□ -1.68
LINC00561-201ENST00000565815 PUM1Q14671 1186 aaKnown RBP eCLIP4.56□□□□□ -1.68
LINC00561-201ENST00000565815 ACOX1Q15067 660 aa4.56□□□□□ -1.68
LINC00561-201ENST00000565815 LRRC26Q2I0M4 334 aa4.56□□□□□ -1.68
LINC00561-201ENST00000565815 DTX2Q86UW9 622 aa4.56□□□□□ -1.68
LINC00561-201ENST00000565815 SLC44A2Q8IWA5 706 aaPredicted RBP4.56□□□□□ -1.68
LINC00561-201ENST00000565815 SPATA5Q8NB90 893 aa4.56□□□□□ -1.68
LINC00561-201ENST00000565815 GPRC5AQ8NFJ5 357 aa4.56□□□□□ -1.68
LINC00561-201ENST00000565815 ANKRD7Q92527 254 aa4.56□□□□□ -1.68
LINC00561-201ENST00000565815 PAGR1Q9BTK6 254 aa4.56□□□□□ -1.68
LINC00561-201ENST00000565815 IDI2Q9BXS1 227 aa4.56□□□□□ -1.68
LINC00561-201ENST00000565815 DUSP22Q9NRW4 184 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms