RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 CAAP1Q9H8G2 361 aa8.8□□□□□ -1
CAPN3-213ENST00000565173 TMPRSS4Q9NRS4 437 aa8.8□□□□□ -1
CAPN3-213ENST00000565173 RRN3Q9NYV6 651 aa8.8□□□□□ -1
CAPN3-213ENST00000565173 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.8□□□□□ -1
CAPN3-213ENST00000565173 ZNF212Q9UDV6 495 aa8.8□□□□□ -1
CAPN3-213ENST00000565173 VPS51Q9UID3 782 aa8.8□□□□□ -1
CAPN3-213ENST00000565173 SLC25A13Q9UJS0 675 aa8.8□□□□□ -1
CAPN3-213ENST00000565173 VPS28Q9UK41 221 aa8.8□□□□□ -1
CAPN3-213ENST00000565173 CA5BQ9Y2D0 317 aa8.8□□□□□ -1
CAPN3-213ENST00000565173 KNTC1P50748 2209 aa8.79□□□□□ -1
CAPN3-213ENST00000565173 C1QTNF3-AMACRE9PGA6 284 aa8.79□□□□□ -1
CAPN3-213ENST00000565173 PRAMEF26H0Y7S4 382 aa8.79□□□□□ -1
CAPN3-213ENST00000565173 TRIM38O00635 465 aa8.79□□□□□ -1
CAPN3-213ENST00000565173 MAGEC1O60732 1142 aa8.79□□□□□ -1
CAPN3-213ENST00000565173 RNGTTO60942 597 aaKnown RBP8.79□□□□□ -1
CAPN3-213ENST00000565173 RFPL3O75679 317 aa8.79□□□□□ -1
CAPN3-213ENST00000565173 ZMPSTE24O75844 475 aa8.79□□□□□ -1
CAPN3-213ENST00000565173 GIMD1P0DJR0 217 aa8.79□□□□□ -1
CAPN3-213ENST00000565173 JUPP14923 745 aa8.79□□□□□ -1
CAPN3-213ENST00000565173 CYP11B1P15538 503 aa8.79□□□□□ -1
CAPN3-213ENST00000565173 ZNF18P17022 549 aa8.79□□□□□ -1
CAPN3-213ENST00000565173 CKMT2P17540 419 aa8.79□□□□□ -1
CAPN3-213ENST00000565173 GLDCP23378 1020 aa8.79□□□□□ -1
CAPN3-213ENST00000565173 RRM1P23921 792 aa8.79□□□□□ -1
CAPN3-213ENST00000565173 CHRNA3P32297 505 aa8.79□□□□□ -1
CAPN3-213ENST00000565173 SCNN1AP37088 669 aa8.79□□□□□ -1
CAPN3-213ENST00000565173 MTIF2P46199 727 aaKnown RBP8.79□□□□□ -1
CAPN3-213ENST00000565173 SNX16P57768 344 aa8.79□□□□□ -1
CAPN3-213ENST00000565173 RNASE9P60153 205 aaKnown RBP8.79□□□□□ -1
CAPN3-213ENST00000565173 UBE2HP62256 183 aa8.79□□□□□ -1
CAPN3-213ENST00000565173 KRT83P78385 493 aa8.79□□□□□ -1
CAPN3-213ENST00000565173 DRAP1Q14919 205 aaPredicted RBP8.79□□□□□ -1
CAPN3-213ENST00000565173 MAN2A1Q16706 1144 aa8.79□□□□□ -1
CAPN3-213ENST00000565173 ZNF284Q2VY69 593 aa8.79□□□□□ -1
CAPN3-213ENST00000565173 PROX2Q3B8N5 592 aa8.79□□□□□ -1
CAPN3-213ENST00000565173 SLC25A52Q3SY17 297 aa8.79□□□□□ -1
CAPN3-213ENST00000565173 VWA3BQ502W6 1294 aa8.79□□□□□ -1
CAPN3-213ENST00000565173 SETMARQ53H47 684 aaPredicted RBP8.79□□□□□ -1
CAPN3-213ENST00000565173 TRNP1Q6NT89 227 aa8.79□□□□□ -1
CAPN3-213ENST00000565173 NEK5Q6P3R8 708 aa8.79□□□□□ -1
CAPN3-213ENST00000565173 LINGO4Q6UY18 593 aa8.79□□□□□ -1
CAPN3-213ENST00000565173 SETD3Q86TU7 594 aaPredicted RBP8.79□□□□□ -1
CAPN3-213ENST00000565173 XYLT1Q86Y38 959 aa8.79□□□□□ -1
CAPN3-213ENST00000565173 OXR1Q8N573 874 aa8.79□□□□□ -1
CAPN3-213ENST00000565173 ATP11CQ8NB49 1132 aa8.79□□□□□ -1
CAPN3-213ENST00000565173 CHST14Q8NCH0 376 aa8.79□□□□□ -1
CAPN3-213ENST00000565173 TMIEQ8NEW7 156 aa8.79□□□□□ -1
CAPN3-213ENST00000565173 VOPP1Q96AW1 172 aa8.79□□□□□ -1
CAPN3-213ENST00000565173 ARRDC3Q96B67 414 aa8.79□□□□□ -1
CAPN3-213ENST00000565173 LRIG1Q96JA1 1093 aa8.79□□□□□ -1
CAPN3-213ENST00000565173 NAA15Q9BXJ9 866 aaKnown RBP8.79□□□□□ -1
CAPN3-213ENST00000565173 NDST4Q9H3R1 872 aa8.79□□□□□ -1
CAPN3-213ENST00000565173 SYNCQ9H7C4 482 aa8.79□□□□□ -1
CAPN3-213ENST00000565173 PREBQ9HCU5 417 aa8.79□□□□□ -1
CAPN3-213ENST00000565173 MPP6Q9NZW5 540 aa8.79□□□□□ -1
CAPN3-213ENST00000565173 TMEM59LQ9UK28 342 aa8.79□□□□□ -1
CAPN3-213ENST00000565173 A0A1W2PQU0 124 aa8.78□□□□□ -1
CAPN3-213ENST00000565173 KPNA3O00505 521 aaPredicted RBP8.78□□□□□ -1
CAPN3-213ENST00000565173 SLC31A1O15431 190 aa8.78□□□□□ -1
CAPN3-213ENST00000565173 TLX3O43711 291 aaPredicted RBP8.78□□□□□ -1
CAPN3-213ENST00000565173 BNIP3LO60238 219 aa8.78□□□□□ -1
CAPN3-213ENST00000565173 SDC3O75056 442 aa8.78□□□□□ -1
CAPN3-213ENST00000565173 ENDOD1O94919 500 aa8.78□□□□□ -1
CAPN3-213ENST00000565173 F9P00740 461 aa8.78□□□□□ -1
CAPN3-213ENST00000565173 PRLRP16471 622 aa8.78□□□□□ -1
CAPN3-213ENST00000565173 DGKAP23743 735 aa8.78□□□□□ -1
CAPN3-213ENST00000565173 ACP1P24666 158 aa8.78□□□□□ -1
CAPN3-213ENST00000565173 FLT3P36888 993 aa8.78□□□□□ -1
CAPN3-213ENST00000565173 SULT1E1P49888 294 aa8.78□□□□□ -1
CAPN3-213ENST00000565173 CLCN6P51797 869 aa8.78□□□□□ -1
CAPN3-213ENST00000565173 BPIFB4P59827 614 aa8.78□□□□□ -1
CAPN3-213ENST00000565173 INSM1Q01101 510 aaPredicted RBP8.78□□□□□ -1
CAPN3-213ENST00000565173 DEUP1Q05D60 604 aa8.78□□□□□ -1
CAPN3-213ENST00000565173 ILKQ13418 452 aa8.78□□□□□ -1
CAPN3-213ENST00000565173 RTP5Q14D33 572 aa8.78□□□□□ -1
CAPN3-213ENST00000565173 C2CD6Q53TS8 623 aa8.78□□□□□ -1
CAPN3-213ENST00000565173 ARSIQ5FYB1 569 aa8.78□□□□□ -1
CAPN3-213ENST00000565173 HES3Q5TGS1 186 aa8.78□□□□□ -1
CAPN3-213ENST00000565173 KLHDC7AQ5VTJ3 777 aa8.78□□□□□ -1
CAPN3-213ENST00000565173 DPY19L3Q6ZPD9 716 aa8.78□□□□□ -1
CAPN3-213ENST00000565173 TFAP2DQ7Z6R9 452 aa8.78□□□□□ -1
CAPN3-213ENST00000565173 NOP9Q86U38 636 aaKnown RBP8.78□□□□□ -1
CAPN3-213ENST00000565173 SLC22A18ASQ8N1D0 253 aa8.78□□□□□ -1
CAPN3-213ENST00000565173 CACTIN-AS1Q8N1I8 211 aa8.78□□□□□ -1
CAPN3-213ENST00000565173 DCAF4L2Q8NA75 395 aa8.78□□□□□ -1
CAPN3-213ENST00000565173 TMEM35BQ8NCS4 154 aa8.78□□□□□ -1
CAPN3-213ENST00000565173 OR7D4Q8NG98 312 aa8.78□□□□□ -1
CAPN3-213ENST00000565173 RFFLQ8WZ73 363 aa8.78□□□□□ -1
CAPN3-213ENST00000565173 KLK6Q92876 244 aa8.78□□□□□ -1
CAPN3-213ENST00000565173 C18orf8Q96DM3 657 aa8.78□□□□□ -1
CAPN3-213ENST00000565173 KLHDC7BQ96G42 594 aa8.78□□□□□ -1
CAPN3-213ENST00000565173 HAPLN3Q96S86 360 aa8.78□□□□□ -1
CAPN3-213ENST00000565173 TUBGCP2Q9BSJ2 902 aa8.78□□□□□ -1
CAPN3-213ENST00000565173 C2orf49Q9BVC5 232 aaPredicted RBP8.78□□□□□ -1
CAPN3-213ENST00000565173 HDAC8Q9BY41 377 aa8.78□□□□□ -1
CAPN3-213ENST00000565173 KLHL11Q9NVR0 708 aa8.78□□□□□ -1
CAPN3-213ENST00000565173 UCKL1Q9NWZ5 548 aa8.78□□□□□ -1
CAPN3-213ENST00000565173 STAP1Q9ULZ2 295 aa8.78□□□□□ -1
CAPN3-213ENST00000565173 ZFR2Q9UPR6 939 aaKnown RBP8.78□□□□□ -1
CAPN3-213ENST00000565173 FHOD1Q9Y613 1164 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms