RNA–Protein interactions for RNA: ENST00000562136.1

HERC2-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 2

Gene HERC2, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-202ENST00000562136 DNAJC3Q13217 504 aa12.85□□□□□ -0.35
HERC2-202ENST00000562136 RTP5Q14D33 572 aa12.85□□□□□ -0.35
HERC2-202ENST00000562136 MAN2A1Q16706 1144 aa12.85□□□□□ -0.35
HERC2-202ENST00000562136 PROX2Q3B8N5 592 aa12.85□□□□□ -0.35
HERC2-202ENST00000562136 SLC25A52Q3SY17 297 aa12.85□□□□□ -0.35
HERC2-202ENST00000562136 SETMARQ53H47 684 aaPredicted RBP12.85□□□□□ -0.35
HERC2-202ENST00000562136 ALFQ53S48 1182 aa12.85□□□□□ -0.35
HERC2-202ENST00000562136 EID2Q8N6I1 236 aa12.85□□□□□ -0.35
HERC2-202ENST00000562136 DCAF4L2Q8NA75 395 aa12.85□□□□□ -0.35
HERC2-202ENST00000562136 RNF34Q969K3 372 aa12.85□□□□□ -0.35
HERC2-202ENST00000562136 C2orf49Q9BVC5 232 aaPredicted RBP12.85□□□□□ -0.35
HERC2-202ENST00000562136 NRSN2Q9GZP1 204 aa12.85□□□□□ -0.35
HERC2-202ENST00000562136 WDCPQ9H6R7 721 aa12.85□□□□□ -0.35
HERC2-202ENST00000562136 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.85□□□□□ -0.35
HERC2-202ENST00000562136 VPS51Q9UID3 782 aa12.85□□□□□ -0.35
HERC2-202ENST00000562136 VPS28Q9UK41 221 aa12.85□□□□□ -0.35
HERC2-202ENST00000562136 GTF3C3Q9Y5Q9 886 aa12.85□□□□□ -0.35
HERC2-202ENST00000562136 MGAQ8IWI9 3026 aa12.85□□□□□ -0.35
HERC2-202ENST00000562136 SYNJ2BP-COX16A0A087WUM0 186 aa12.84□□□□□ -0.35
HERC2-202ENST00000562136 SMAD6O43541 496 aaKnown RBP12.84□□□□□ -0.35
HERC2-202ENST00000562136 ZMPSTE24O75844 475 aa12.84□□□□□ -0.35
HERC2-202ENST00000562136 ENDOD1O94919 500 aa12.84□□□□□ -0.35
HERC2-202ENST00000562136 CKMT2P17540 419 aa12.84□□□□□ -0.35
HERC2-202ENST00000562136 GGCXP38435 758 aa12.84□□□□□ -0.35
HERC2-202ENST00000562136 KRT83P78385 493 aa12.84□□□□□ -0.35
HERC2-202ENST00000562136 KCNMA1Q12791 1236 aa12.84□□□□□ -0.35
HERC2-202ENST00000562136 NME3Q13232 169 aa12.84□□□□□ -0.35
HERC2-202ENST00000562136 ACAP1Q15027 740 aa12.84□□□□□ -0.35
HERC2-202ENST00000562136 ZNF284Q2VY69 593 aa12.84□□□□□ -0.35
HERC2-202ENST00000562136 ZNF783Q6ZMS7 281 aa12.84□□□□□ -0.35
HERC2-202ENST00000562136 XYLT1Q86Y38 959 aa12.84□□□□□ -0.35
HERC2-202ENST00000562136 SLC25A45Q8N413 288 aa12.84□□□□□ -0.35
HERC2-202ENST00000562136 TMEM35BQ8NCS4 154 aa12.84□□□□□ -0.35
HERC2-202ENST00000562136 IFT43Q96FT9 208 aa12.84□□□□□ -0.35
HERC2-202ENST00000562136 HAPLN3Q96S86 360 aa12.84□□□□□ -0.35
HERC2-202ENST00000562136 HDAC8Q9BY41 377 aa12.84□□□□□ -0.35
HERC2-202ENST00000562136 TKTL2Q9H0I9 626 aa12.84□□□□□ -0.35
HERC2-202ENST00000562136 NDST4Q9H3R1 872 aa12.84□□□□□ -0.35
HERC2-202ENST00000562136 GPR27Q9NS67 375 aa12.84□□□□□ -0.35
HERC2-202ENST00000562136 COX16Q9P0S2 106 aa12.84□□□□□ -0.35
HERC2-202ENST00000562136 TMEM59LQ9UK28 342 aa12.84□□□□□ -0.35
HERC2-202ENST00000562136 STAP1Q9ULZ2 295 aa12.84□□□□□ -0.35
HERC2-202ENST00000562136 COL27A1Q8IZC6 1860 aaPredicted RBP12.84□□□□□ -0.35
HERC2-202ENST00000562136 ILVBLA1L0T0 632 aa12.83□□□□□ -0.36
HERC2-202ENST00000562136 RNF103O00237 685 aa12.83□□□□□ -0.36
HERC2-202ENST00000562136 SNAP91O60641 907 aa12.83□□□□□ -0.36
HERC2-202ENST00000562136 LSM8O95777 96 aaKnown RBP12.83□□□□□ -0.36
HERC2-202ENST00000562136 PNMA6AP0CW24 399 aaPredicted RBP12.83□□□□□ -0.36
HERC2-202ENST00000562136 GIMD1P0DJR0 217 aa12.83□□□□□ -0.36
HERC2-202ENST00000562136 CYP11B1P15538 503 aa12.83□□□□□ -0.36
HERC2-202ENST00000562136 MAT2AP31153 395 aaKnown RBP12.83□□□□□ -0.36
HERC2-202ENST00000562136 CHRNA3P32297 505 aa12.83□□□□□ -0.36
HERC2-202ENST00000562136 HNF1BP35680 557 aa12.83□□□□□ -0.36
HERC2-202ENST00000562136 NUMBP49757 651 aa12.83□□□□□ -0.36
HERC2-202ENST00000562136 CCDC15Q0P6D6 951 aa12.83□□□□□ -0.36
HERC2-202ENST00000562136 ZNF211Q13398 564 aaPredicted RBP12.83□□□□□ -0.36
HERC2-202ENST00000562136 STAT4Q14765 748 aa12.83□□□□□ -0.36
HERC2-202ENST00000562136 ACCSLQ4AC99 568 aa12.83□□□□□ -0.36
HERC2-202ENST00000562136 TMEM259Q4ZIN3 620 aa12.83□□□□□ -0.36
HERC2-202ENST00000562136 TRNP1Q6NT89 227 aa12.83□□□□□ -0.36
HERC2-202ENST00000562136 ABI3BPQ7Z7G0 1075 aa12.83□□□□□ -0.36
HERC2-202ENST00000562136 FAM174AQ8TBP5 190 aa12.83□□□□□ -0.36
HERC2-202ENST00000562136 HNRNPLLQ8WVV9 542 aaKnown RBP12.83□□□□□ -0.36
HERC2-202ENST00000562136 VOPP1Q96AW1 172 aa12.83□□□□□ -0.36
HERC2-202ENST00000562136 ARRDC3Q96B67 414 aa12.83□□□□□ -0.36
HERC2-202ENST00000562136 NXPE2Q96DL1 559 aa12.83□□□□□ -0.36
HERC2-202ENST00000562136 C18orf8Q96DM3 657 aa12.83□□□□□ -0.36
HERC2-202ENST00000562136 SIK2Q9H0K1 926 aa12.83□□□□□ -0.36
HERC2-202ENST00000562136 KLHL11Q9NVR0 708 aa12.83□□□□□ -0.36
HERC2-202ENST00000562136 PAXBP1Q9Y5B6 917 aa12.83□□□□□ -0.36
HERC2-202ENST00000562136 ATMQ13315 3056 aa12.82□□□□□ -0.36
HERC2-202ENST00000562136 A0A0D9SEW6 157 aa12.82□□□□□ -0.36
HERC2-202ENST00000562136 K7ERQ8 282 aa12.82□□□□□ -0.36
HERC2-202ENST00000562136 TRIM38O00635 465 aa12.82□□□□□ -0.36
HERC2-202ENST00000562136 PRNPP04156 253 aa12.82□□□□□ -0.36
HERC2-202ENST00000562136 RHOCP08134 193 aa12.82□□□□□ -0.36
HERC2-202ENST00000562136 JUPP14923 745 aa12.82□□□□□ -0.36
HERC2-202ENST00000562136 ERCC5P28715 1186 aaPredicted RBP12.82□□□□□ -0.36
HERC2-202ENST00000562136 FLT3P36888 993 aa12.82□□□□□ -0.36
HERC2-202ENST00000562136 MTIF2P46199 727 aaKnown RBP12.82□□□□□ -0.36
HERC2-202ENST00000562136 NRG1Q02297 640 aaPredicted RBP12.82□□□□□ -0.36
HERC2-202ENST00000562136 SLC20A2Q08357 652 aa12.82□□□□□ -0.36
HERC2-202ENST00000562136 TARDBPQ13148 414 aaKnown RBP eCLIP12.82□□□□□ -0.36
HERC2-202ENST00000562136 DRAP1Q14919 205 aaPredicted RBP12.82□□□□□ -0.36
HERC2-202ENST00000562136 CAMK4Q16566 473 aa12.82□□□□□ -0.36
HERC2-202ENST00000562136 VWA3BQ502W6 1294 aa12.82□□□□□ -0.36
HERC2-202ENST00000562136 C6orf118Q5T5N4 469 aa12.82□□□□□ -0.36
HERC2-202ENST00000562136 HES3Q5TGS1 186 aa12.82□□□□□ -0.36
HERC2-202ENST00000562136 KLHDC7AQ5VTJ3 777 aa12.82□□□□□ -0.36
HERC2-202ENST00000562136 HORMAD1Q86X24 394 aa12.82□□□□□ -0.36
HERC2-202ENST00000562136 PLPP6Q8IY26 295 aa12.82□□□□□ -0.36
HERC2-202ENST00000562136 DCBLD1Q8N8Z6 715 aa12.82□□□□□ -0.36
HERC2-202ENST00000562136 OR4C6Q8NH72 309 aa12.82□□□□□ -0.36
HERC2-202ENST00000562136 KLHDC7BQ96G42 594 aa12.82□□□□□ -0.36
HERC2-202ENST00000562136 CCDC114Q96M63 670 aa12.82□□□□□ -0.36
HERC2-202ENST00000562136 BBC3Q96PG8 261 aaPredicted RBP12.82□□□□□ -0.36
HERC2-202ENST00000562136 TBCBQ99426 244 aa12.82□□□□□ -0.36
HERC2-202ENST00000562136 CEP44Q9C0F1 390 aa12.82□□□□□ -0.36
HERC2-202ENST00000562136 MUC3BQ9H195 1237 aa12.82□□□□□ -0.36
HERC2-202ENST00000562136 RETREG1Q9H6L5 497 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms