RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 HSPH1Q92598 858 aa5.61□□□□□ -1.51
GABPB1-207ENST00000558335 C11orf24Q96F05 449 aaPredicted RBP5.61□□□□□ -1.51
GABPB1-207ENST00000558335 SPATA17Q96L03 361 aa5.61□□□□□ -1.51
GABPB1-207ENST00000558335 HSFY1Q96LI6 401 aa5.61□□□□□ -1.51
GABPB1-207ENST00000558335 ZNF560Q96MR9 790 aa5.61□□□□□ -1.51
GABPB1-207ENST00000558335 ACAP3Q96P50 834 aa5.61□□□□□ -1.51
GABPB1-207ENST00000558335 RBM14Q96PK6 669 aaKnown RBP5.61□□□□□ -1.51
GABPB1-207ENST00000558335 QKIQ96PU8 341 aaKnown RBP eCLIP5.61□□□□□ -1.51
GABPB1-207ENST00000558335 FAM111AQ96PZ2 611 aa5.61□□□□□ -1.51
GABPB1-207ENST00000558335 BTBD9Q96Q07 612 aa5.61□□□□□ -1.51
GABPB1-207ENST00000558335 WRNIP1Q96S55 665 aa5.61□□□□□ -1.51
GABPB1-207ENST00000558335 VAT1Q99536 393 aa5.61□□□□□ -1.51
GABPB1-207ENST00000558335 CPNE1Q99829 537 aa5.61□□□□□ -1.51
GABPB1-207ENST00000558335 HEPHQ9BQS7 1158 aa5.61□□□□□ -1.51
GABPB1-207ENST00000558335 HERPUD2Q9BSE4 406 aa5.61□□□□□ -1.51
GABPB1-207ENST00000558335 CENPOQ9BU64 300 aa5.61□□□□□ -1.51
GABPB1-207ENST00000558335 CADM1Q9BY67 442 aaKnown RBP5.61□□□□□ -1.51
GABPB1-207ENST00000558335 GLIS2Q9BZE0 524 aaPredicted RBP5.61□□□□□ -1.51
GABPB1-207ENST00000558335 ZNF541Q9H0D2 1346 aa5.61□□□□□ -1.51
GABPB1-207ENST00000558335 XYLT2Q9H1B5 865 aa5.61□□□□□ -1.51
GABPB1-207ENST00000558335 DENND2DQ9H6A0 471 aaPredicted RBP5.61□□□□□ -1.51
GABPB1-207ENST00000558335 SPC25Q9HBM1 224 aa5.61□□□□□ -1.51
GABPB1-207ENST00000558335 MRM3Q9HC36 420 aaKnown RBP5.61□□□□□ -1.51
GABPB1-207ENST00000558335 PTPRHQ9HD43 1115 aa5.61□□□□□ -1.51
GABPB1-207ENST00000558335 SLCO1B3Q9NPD5 702 aa5.61□□□□□ -1.51
GABPB1-207ENST00000558335 ZNF277Q9NRM2 450 aaPredicted RBP5.61□□□□□ -1.51
GABPB1-207ENST00000558335 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.61□□□□□ -1.51
GABPB1-207ENST00000558335 ZDHHC7Q9NXF8 308 aa5.61□□□□□ -1.51
GABPB1-207ENST00000558335 STMN3Q9NZ72 180 aa5.61□□□□□ -1.51
GABPB1-207ENST00000558335 GMIPQ9P107 970 aa5.61□□□□□ -1.51
GABPB1-207ENST00000558335 CNTN3Q9P232 1028 aa5.61□□□□□ -1.51
GABPB1-207ENST00000558335 NXF1Q9UBU9 619 aaKnown RBP5.61□□□□□ -1.51
GABPB1-207ENST00000558335 VTI1BQ9UEU0 232 aa5.61□□□□□ -1.51
GABPB1-207ENST00000558335 DCTN4Q9UJW0 460 aa5.61□□□□□ -1.51
GABPB1-207ENST00000558335 TRHDEQ9UKU6 1024 aa5.61□□□□□ -1.51
GABPB1-207ENST00000558335 STAP1Q9ULZ2 295 aa5.61□□□□□ -1.51
GABPB1-207ENST00000558335 PRPF19Q9UMS4 504 aaKnown RBP5.61□□□□□ -1.51
GABPB1-207ENST00000558335 B3GNT3Q9Y2A9 372 aa5.61□□□□□ -1.51
GABPB1-207ENST00000558335 DNAJC16Q9Y2G8 782 aa5.61□□□□□ -1.51
GABPB1-207ENST00000558335 NOX1Q9Y5S8 564 aa5.61□□□□□ -1.51
GABPB1-207ENST00000558335 CSADQ9Y600 493 aa5.61□□□□□ -1.51
GABPB1-207ENST00000558335 ANK1P16157 1881 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 PTPRJQ12913 1337 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 TMEM238LA0A1B0GVL6 79 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 RRN3P2A6NIE6 340 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 OR5K4A6NMS3 321 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 SPDYE16A6NNV3 312 aaPredicted RBP5.6□□□□□ -1.51
GABPB1-207ENST00000558335 CXCL11O14625 94 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 SNPHO15079 494 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 CCNT2O60583 730 aaKnown RBP5.6□□□□□ -1.51
GABPB1-207ENST00000558335 CBX6O95503 412 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 CHEK2O96017 543 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 CST3P01034 146 aaPredicted RBP5.6□□□□□ -1.51
GABPB1-207ENST00000558335 APRTP07741 180 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 LYNP07948 512 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 ABCB1P08183 1280 aaPredicted RBP5.6□□□□□ -1.51
GABPB1-207ENST00000558335 ENO2P09104 434 aaPredicted RBP5.6□□□□□ -1.51
GABPB1-207ENST00000558335 ZSCAN5DPP0CG00 497 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 STAG3L1P0CL83 205 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 SRGAP2CP0DJJ0 459 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 SRGAP2BP0DMP2 458 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 SLURP2P0DP57 97 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 THRAP10827 490 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 CDK4P11802 303 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 COL6A2P12110 1019 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 ZNF3P17036 446 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 SYN1P17600 705 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 CDH3P22223 829 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 HOXC13P31276 330 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 HTR7P34969 479 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 GP5P40197 560 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 MAGEA3P43357 314 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 RPL5P46777 297 aaKnown RBP5.6□□□□□ -1.51
GABPB1-207ENST00000558335 HAAOP46952 286 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 NPY2RP49146 381 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 GLUD2P49448 558 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 HIRAP54198 1017 aaPredicted RBP5.6□□□□□ -1.51
GABPB1-207ENST00000558335 HMGCS2P54868 508 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 TBX4P57082 545 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 SRP54P61011 504 aaKnown RBP5.6□□□□□ -1.51
GABPB1-207ENST00000558335 NAA20P61599 178 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 YWHAZP63104 245 aaKnown RBP5.6□□□□□ -1.51
GABPB1-207ENST00000558335 CCNA1P78396 465 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 SP4Q02446 784 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 FCHO2Q0JRZ9 810 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 LRRC74AQ0VAA2 488 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 SCRN3Q0VDG4 424 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 FAAP100Q0VG06 881 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 BST2Q10589 180 aaKnown RBP5.6□□□□□ -1.51
GABPB1-207ENST00000558335 MED21Q13503 144 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 RCN2Q14257 317 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 GNA13Q14344 377 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 PRPSAP1Q14558 356 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 SEMA3AQ14563 771 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 FASTKD3Q14CZ7 662 aaKnown RBP5.6□□□□□ -1.51
GABPB1-207ENST00000558335 CHI3L2Q15782 390 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 NFE2Q16621 373 aaPredicted RBP5.6□□□□□ -1.51
GABPB1-207ENST00000558335 RGS21Q2M5E4 152 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 FBXO43Q4G163 708 aa5.6□□□□□ -1.51
GABPB1-207ENST00000558335 C6orf10Q5SRN2 563 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms