RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 CALCAP01258 141 aa18.81■□□□□ 0.6
ABCD4-228ENST00000557588 NME1P15531 152 aaKnown RBP18.81■□□□□ 0.6
ABCD4-228ENST00000557588 MLLT3P42568 568 aaPredicted RBP18.81■□□□□ 0.6
ABCD4-228ENST00000557588 ACADSBP45954 432 aa18.81■□□□□ 0.6
ABCD4-228ENST00000557588 CSRP3P50461 194 aa18.81■□□□□ 0.6
ABCD4-228ENST00000557588 CLDN2P57739 230 aa18.81■□□□□ 0.6
ABCD4-228ENST00000557588 CENPCQ03188 943 aa18.81■□□□□ 0.6
ABCD4-228ENST00000557588 CCDC15Q0P6D6 951 aa18.81■□□□□ 0.6
ABCD4-228ENST00000557588 PKP1Q13835 747 aa18.81■□□□□ 0.6
ABCD4-228ENST00000557588 TMEM259Q4ZIN3 620 aa18.81■□□□□ 0.6
ABCD4-228ENST00000557588 KYAT3Q6YP21 454 aaKnown RBP18.81■□□□□ 0.6
ABCD4-228ENST00000557588 CLEC14AQ86T13 490 aa18.81■□□□□ 0.6
ABCD4-228ENST00000557588 DCP2Q8IU60 420 aaKnown RBP18.81■□□□□ 0.6
ABCD4-228ENST00000557588 KAT5Q92993 513 aa18.81■□□□□ 0.6
ABCD4-228ENST00000557588 ST7Q9NRC1 585 aa18.81■□□□□ 0.6
ABCD4-228ENST00000557588 DNAJC28Q9NX36 388 aa18.81■□□□□ 0.6
ABCD4-228ENST00000557588 ARMCX3Q9UH62 379 aaPredicted RBP18.81■□□□□ 0.6
ABCD4-228ENST00000557588 ZFR2Q9UPR6 939 aaKnown RBP18.81■□□□□ 0.6
ABCD4-228ENST00000557588 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.8■□□□□ 0.6
ABCD4-228ENST00000557588 KPNA3O00505 521 aaPredicted RBP18.8■□□□□ 0.6
ABCD4-228ENST00000557588 TCEA3O75764 348 aa18.8■□□□□ 0.6
ABCD4-228ENST00000557588 FMO5P49326 533 aa18.8■□□□□ 0.6
ABCD4-228ENST00000557588 PITX1P78337 314 aaPredicted RBP18.8■□□□□ 0.6
ABCD4-228ENST00000557588 FKBP3Q00688 224 aaKnown RBP18.8■□□□□ 0.6
ABCD4-228ENST00000557588 CLN3Q13286 438 aa18.8■□□□□ 0.6
ABCD4-228ENST00000557588 ZNF177Q13360 481 aaPredicted RBP18.8■□□□□ 0.6
ABCD4-228ENST00000557588 MEA1Q16626 185 aa18.8■□□□□ 0.6
ABCD4-228ENST00000557588 ZNF542PQ5EBM4 170 aa18.8■□□□□ 0.6
ABCD4-228ENST00000557588 FBXL22Q6P050 247 aa18.8■□□□□ 0.6
ABCD4-228ENST00000557588 GUSBP11Q6P575 273 aa18.8■□□□□ 0.6
ABCD4-228ENST00000557588 CCDC81Q6ZN84 652 aa18.8■□□□□ 0.6
ABCD4-228ENST00000557588 RBM44Q6ZP01 1051 aaKnown RBP18.8■□□□□ 0.6
ABCD4-228ENST00000557588 Q6ZSR6 202 aa18.8■□□□□ 0.6
ABCD4-228ENST00000557588 PRICKLE2Q7Z3G6 844 aa18.8■□□□□ 0.6
ABCD4-228ENST00000557588 PTAR1Q7Z6K3 402 aaPredicted RBP18.8■□□□□ 0.6
ABCD4-228ENST00000557588 PPM1KQ8N3J5 372 aa18.8■□□□□ 0.6
ABCD4-228ENST00000557588 OR2A12Q8NGT7 310 aa18.8■□□□□ 0.6
ABCD4-228ENST00000557588 STK32AQ8WU08 396 aa18.8■□□□□ 0.6
ABCD4-228ENST00000557588 ARRDC3Q96B67 414 aa18.8■□□□□ 0.6
ABCD4-228ENST00000557588 RPRD1AQ96P16 312 aaPredicted RBP18.8■□□□□ 0.6
ABCD4-228ENST00000557588 SLC4A5Q9BY07 1137 aa18.8■□□□□ 0.6
ABCD4-228ENST00000557588 SLC12A6Q9UHW9 1150 aa18.8■□□□□ 0.6
ABCD4-228ENST00000557588 VPS28Q9UK41 221 aa18.8■□□□□ 0.6
ABCD4-228ENST00000557588 CSNK1G3Q9Y6M4 447 aa18.8■□□□□ 0.6
ABCD4-228ENST00000557588 H3BM21 787 aa18.79■□□□□ 0.6
ABCD4-228ENST00000557588 PMM2O15305 246 aa18.79■□□□□ 0.6
ABCD4-228ENST00000557588 BNIP3LO60238 219 aa18.79■□□□□ 0.6
ABCD4-228ENST00000557588 CSF2P04141 144 aa18.79■□□□□ 0.6
ABCD4-228ENST00000557588 SLC2A3P11169 496 aa18.79■□□□□ 0.6
ABCD4-228ENST00000557588 SRCP12931 536 aa18.79■□□□□ 0.6
ABCD4-228ENST00000557588 CHRNA3P32297 505 aa18.79■□□□□ 0.6
ABCD4-228ENST00000557588 IRAK1P51617 712 aa18.79■□□□□ 0.6
ABCD4-228ENST00000557588 YWHAZP63104 245 aaKnown RBP18.79■□□□□ 0.6
ABCD4-228ENST00000557588 FZD2Q14332 565 aa18.79■□□□□ 0.6
ABCD4-228ENST00000557588 CDKN3Q16667 212 aa18.79■□□□□ 0.6
ABCD4-228ENST00000557588 COBLL1Q53SF7 1204 aa18.79■□□□□ 0.6
ABCD4-228ENST00000557588 SEL1L3Q68CR1 1132 aa18.79■□□□□ 0.6
ABCD4-228ENST00000557588 OR6B2Q6IFH4 312 aa18.79■□□□□ 0.6
ABCD4-228ENST00000557588 EFL1Q7Z2Z2 1120 aaKnown RBP18.79■□□□□ 0.6
ABCD4-228ENST00000557588 PARGQ86W56 976 aa18.79■□□□□ 0.6
ABCD4-228ENST00000557588 TMIEQ8NEW7 156 aa18.79■□□□□ 0.6
ABCD4-228ENST00000557588 TPCN2Q8NHX9 752 aa18.79■□□□□ 0.6
ABCD4-228ENST00000557588 RNF34Q969K3 372 aa18.79■□□□□ 0.6
ABCD4-228ENST00000557588 CCDC114Q96M63 670 aa18.79■□□□□ 0.6
ABCD4-228ENST00000557588 TSG101Q99816 390 aa18.79■□□□□ 0.6
ABCD4-228ENST00000557588 FAM204AQ9H8W3 233 aa18.79■□□□□ 0.6
ABCD4-228ENST00000557588 SPTY2D1-AS1A0A0U1RR47 76 aa18.78■□□□□ 0.6
ABCD4-228ENST00000557588 PMS2P1A4D2B8 440 aa18.78■□□□□ 0.6
ABCD4-228ENST00000557588 EME2A4GXA9 379 aaPredicted RBP18.78■□□□□ 0.6
ABCD4-228ENST00000557588 PRNPP04156 253 aa18.78■□□□□ 0.6
ABCD4-228ENST00000557588 KRT10P13645 584 aa18.78■□□□□ 0.6
ABCD4-228ENST00000557588 CCR1P32246 355 aa18.78■□□□□ 0.6
ABCD4-228ENST00000557588 GCNT1Q02742 428 aa18.78■□□□□ 0.6
ABCD4-228ENST00000557588 KIF26BQ2KJY2 2108 aa18.78■□□□□ 0.6
ABCD4-228ENST00000557588 ERN2Q76MJ5 926 aaKnown RBP18.78■□□□□ 0.6
ABCD4-228ENST00000557588 ARL14Q8N4G2 192 aa18.78■□□□□ 0.6
ABCD4-228ENST00000557588 BMFQ96LC9 184 aa18.78■□□□□ 0.6
ABCD4-228ENST00000557588 SPATA32Q96LK8 384 aa18.78■□□□□ 0.6
ABCD4-228ENST00000557588 HDAC8Q9BY41 377 aa18.78■□□□□ 0.6
ABCD4-228ENST00000557588 THAP9Q9H5L6 903 aa18.78■□□□□ 0.6
ABCD4-228ENST00000557588 DYRK4Q9NR20 520 aa18.78■□□□□ 0.6
ABCD4-228ENST00000557588 SALL4Q9UJQ4 1053 aa18.78■□□□□ 0.6
ABCD4-228ENST00000557588 TBC1D30Q9Y2I9 924 aa18.78■□□□□ 0.6
ABCD4-228ENST00000557588 FARP1Q9Y4F1 1045 aaPredicted RBP18.78■□□□□ 0.6
ABCD4-228ENST00000557588 HS3ST3A1Q9Y663 406 aa18.78■□□□□ 0.6
ABCD4-228ENST00000557588 TLN1Q9Y490 2541 aaKnown RBP18.78■□□□□ 0.6
ABCD4-228ENST00000557588 COL12A1Q99715 3063 aa18.78■□□□□ 0.6
ABCD4-228ENST00000557588 TRPM6Q9BX84 2022 aa18.78■□□□□ 0.6
ABCD4-228ENST00000557588 CPED1A4D0V7 1026 aa18.77■□□□□ 0.6
ABCD4-228ENST00000557588 E5RJQ4 531 aa18.77■□□□□ 0.6
ABCD4-228ENST00000557588 RNF103O00237 685 aa18.77■□□□□ 0.6
ABCD4-228ENST00000557588 PCDH8O95206 1070 aa18.77■□□□□ 0.6
ABCD4-228ENST00000557588 ITGA2BP08514 1039 aa18.77■□□□□ 0.6
ABCD4-228ENST00000557588 PRCPP42785 496 aa18.77■□□□□ 0.6
ABCD4-228ENST00000557588 PDX1P52945 283 aa18.77■□□□□ 0.6
ABCD4-228ENST00000557588 PMS1P54277 932 aaKnown RBP18.77■□□□□ 0.6
ABCD4-228ENST00000557588 MTA1Q13330 715 aa18.77■□□□□ 0.6
ABCD4-228ENST00000557588 AUHQ13825 339 aaKnown RBP18.77■□□□□ 0.6
ABCD4-228ENST00000557588 ARL13BQ3SXY8 428 aa18.77■□□□□ 0.6
ABCD4-228ENST00000557588 DENND1BQ6P3S1 775 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms