RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 STKLD1Q8NE28 680 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 ENGASEQ8NFI3 743 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 CADM4Q8NFZ8 388 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 IPO4Q8TEX9 1081 aaKnown RBP5.13□□□□□ -1.59
ATXN3-239ENST00000556315 OTUB2Q96DC9 234 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 FUBP3Q96I24 572 aaKnown RBP eCLIP5.13□□□□□ -1.59
ATXN3-239ENST00000556315 SPATA17Q96L03 361 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 MAGEB10Q96LZ2 347 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-239ENST00000556315 CEP295NLQ96MC4 621 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 MSTO1Q9BUK6 570 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 RNF38Q9H0F5 515 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 GAREM1Q9H706 876 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 ZDHHC4Q9NPG8 344 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 TM7SF3Q9NS93 570 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 DDX43Q9NXZ2 648 aaKnown RBP5.13□□□□□ -1.59
ATXN3-239ENST00000556315 EHD2Q9NZN4 543 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 KCND2Q9NZV8 630 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 MARCH2Q9P0N8 246 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 LARSQ9P2J5 1176 aaKnown RBP5.13□□□□□ -1.59
ATXN3-239ENST00000556315 DEC1Q9P2X7 70 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 GTF3C4Q9UKN8 822 aa5.13□□□□□ -1.59
ATXN3-239ENST00000556315 COA3Q9Y2R0 106 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-239ENST00000556315 ASCC3Q8N3C0 2202 aaKnown RBP5.13□□□□□ -1.59
ATXN3-239ENST00000556315 URB1O60287 2271 aaKnown RBP5.13□□□□□ -1.59
ATXN3-239ENST00000556315 SMG1Q96Q15 3661 aaKnown RBP5.13□□□□□ -1.59
ATXN3-239ENST00000556315 SETXQ7Z333 2677 aaKnown RBP5.12□□□□□ -1.59
ATXN3-239ENST00000556315 E2F8A0AVK6 867 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 FAM149AA5PLN7 773 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 HNRNPDLO14979 420 aaKnown RBP5.12□□□□□ -1.59
ATXN3-239ENST00000556315 BCAT2O15382 392 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-239ENST00000556315 ARHGAP6O43182 974 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 TULP3O75386 442 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 OLFM2O95897 454 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 PIGRP01833 764 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 FUCA1P04066 466 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 CDK4P11802 303 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 JUPP14923 745 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 GRK2P25098 689 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 PCSK1P29120 753 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 OXTRP30559 389 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 ABCD1P33897 745 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 GRK3P35626 688 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 MATKP42679 507 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 WASP42768 502 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 TRAPPC10P48553 1259 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 LHX1P48742 406 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 GUCY1A3Q02108 690 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 KDSRQ06136 332 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 EFEMP1Q12805 493 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 ANKRD1Q15327 319 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 TTC38Q5R3I4 469 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 LY6G5CQ5SRR4 150 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 C10orf76Q5T2E6 689 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 MROH9Q5TGP6 573 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 BICRALQ6AI39 1079 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 SLFN12LQ6IEE8 588 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 FAM171BQ6P995 826 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 VSTM1Q6UX27 236 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 C4orf50Q6ZRC1 276 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 DENND5BQ6ZUT9 1274 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 BRAPQ7Z569 592 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 GGNQ86UU5 652 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 CHPFQ8IZ52 775 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 TMEM86AQ8N2M4 240 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 PDCL2Q8N4E4 241 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 IGSF22Q8N9C0 903 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 SYT2Q8N9I0 419 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-239ENST00000556315 NINJ1Q92982 152 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 WBP1Q96G27 269 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 ZNF560Q96MR9 790 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 PKMYT1Q99640 499 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 FOXP1Q9H334 677 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-239ENST00000556315 CLMPQ9H6B4 373 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 IL21RQ9HBE5 538 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 ITM2CQ9NQX7 267 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 INTS7Q9NVH2 962 aaKnown RBP5.12□□□□□ -1.59
ATXN3-239ENST00000556315 CFAP97Q9P2B7 532 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 MAGEC2Q9UBF1 373 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-239ENST00000556315 PCDHB6Q9Y5E3 794 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 CPQQ9Y646 472 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 WDR81Q562E7 1941 aa5.12□□□□□ -1.59
ATXN3-239ENST00000556315 DSPP15924 2871 aaKnown RBP5.12□□□□□ -1.59
ATXN3-239ENST00000556315 LAMA5O15230 3695 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 ASH1LQ9NR48 2969 aaKnown RBP5.11□□□□□ -1.59
ATXN3-239ENST00000556315 SPAG17Q6Q759 2223 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 MEI4A8MW99 385 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 C22orf46C9J442 243 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 FAM47E-STBD1D6RA91 191 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 PLK4O00444 970 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 GABRDO14764 452 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 HOXC11O43248 304 aaPredicted RBP5.11□□□□□ -1.59
ATXN3-239ENST00000556315 IL18RAPO95256 599 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 CYBBP04839 570 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 DBHP09172 617 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 C1SP09871 688 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 PLA2G4BP0C869 781 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 NCAM1P13591 858 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 ACAT1P24752 427 aaKnown RBP5.11□□□□□ -1.59
ATXN3-239ENST00000556315 TACR1P25103 407 aa5.11□□□□□ -1.59
ATXN3-239ENST00000556315 ANXA13P27216 316 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms