RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 ATL2Q8NHH9 583 aa12.72□□□□□ -0.37
SHMT2-221ENST00000555773 C1orf54Q8WWF1 131 aa12.72□□□□□ -0.37
SHMT2-221ENST00000555773 EDAQ92838 391 aa12.72□□□□□ -0.37
SHMT2-221ENST00000555773 MAGOHBQ96A72 148 aaKnown RBP12.72□□□□□ -0.37
SHMT2-221ENST00000555773 NECAB3Q96P71 396 aaPredicted RBP12.72□□□□□ -0.37
SHMT2-221ENST00000555773 QKIQ96PU8 341 aaKnown RBP eCLIP12.72□□□□□ -0.37
SHMT2-221ENST00000555773 VAT1Q99536 393 aa12.72□□□□□ -0.37
SHMT2-221ENST00000555773 LGMNQ99538 433 aa12.72□□□□□ -0.37
SHMT2-221ENST00000555773 AP1M1Q9BXS5 423 aa12.72□□□□□ -0.37
SHMT2-221ENST00000555773 PDFQ9HBH1 243 aa12.72□□□□□ -0.37
SHMT2-221ENST00000555773 HAUS2Q9NVX0 235 aa12.72□□□□□ -0.37
SHMT2-221ENST00000555773 UBA2Q9UBT2 640 aaPredicted RBP12.72□□□□□ -0.37
SHMT2-221ENST00000555773 AMACRQ9UHK6 382 aa12.72□□□□□ -0.37
SHMT2-221ENST00000555773 SLC25A13Q9UJS0 675 aa12.72□□□□□ -0.37
SHMT2-221ENST00000555773 CA14Q9ULX7 337 aa12.72□□□□□ -0.37
SHMT2-221ENST00000555773 SLC8A2Q9UPR5 921 aa12.72□□□□□ -0.37
SHMT2-221ENST00000555773 ERVW-1Q9UQF0 538 aa12.72□□□□□ -0.37
SHMT2-221ENST00000555773 HS3ST2Q9Y278 367 aa12.72□□□□□ -0.37
SHMT2-221ENST00000555773 MRFAP1Q9Y605 127 aa12.72□□□□□ -0.37
SHMT2-221ENST00000555773 KANSL1LA0AUZ9 987 aa12.71□□□□□ -0.37
SHMT2-221ENST00000555773 KRBA1A5PL33 1030 aa12.71□□□□□ -0.37
SHMT2-221ENST00000555773 PDE2AO00408 941 aaPredicted RBP12.71□□□□□ -0.37
SHMT2-221ENST00000555773 MAP3K6O95382 1288 aa12.71□□□□□ -0.37
SHMT2-221ENST00000555773 PEX11BO96011 259 aa12.71□□□□□ -0.37
SHMT2-221ENST00000555773 ITGAVP06756 1048 aa12.71□□□□□ -0.37
SHMT2-221ENST00000555773 ALADP13716 330 aa12.71□□□□□ -0.37
SHMT2-221ENST00000555773 CCNB1P14635 433 aa12.71□□□□□ -0.37
SHMT2-221ENST00000555773 CHRNA3P32297 505 aa12.71□□□□□ -0.37
SHMT2-221ENST00000555773 MRPS21P82921 87 aaKnown RBP12.71□□□□□ -0.37
SHMT2-221ENST00000555773 ARF5P84085 180 aa12.71□□□□□ -0.37
SHMT2-221ENST00000555773 OASLQ15646 514 aaKnown RBP12.71□□□□□ -0.37
SHMT2-221ENST00000555773 MARC1Q5VT66 337 aa12.71□□□□□ -0.37
SHMT2-221ENST00000555773 ARHGAP36Q6ZRI8 547 aa12.71□□□□□ -0.37
SHMT2-221ENST00000555773 SIX5Q8N196 739 aa12.71□□□□□ -0.37
SHMT2-221ENST00000555773 CCDC33Q8N5R6 958 aa12.71□□□□□ -0.37
SHMT2-221ENST00000555773 TEX26Q8N6G2 289 aa12.71□□□□□ -0.37
SHMT2-221ENST00000555773 SPATA4Q8NEY3 305 aa12.71□□□□□ -0.37
SHMT2-221ENST00000555773 HTR3CQ8WXA8 447 aa12.71□□□□□ -0.37
SHMT2-221ENST00000555773 MAML1Q92585 1016 aa12.71□□□□□ -0.37
SHMT2-221ENST00000555773 ISG20Q96AZ6 181 aaKnown RBP12.71□□□□□ -0.37
SHMT2-221ENST00000555773 RUNDC3BQ96NL0 473 aa12.71□□□□□ -0.37
SHMT2-221ENST00000555773 OSBPL6Q9BZF3 934 aa12.71□□□□□ -0.37
SHMT2-221ENST00000555773 CEP44Q9C0F1 390 aa12.71□□□□□ -0.37
SHMT2-221ENST00000555773 USP29Q9HBJ7 922 aa12.71□□□□□ -0.37
SHMT2-221ENST00000555773 SMARCAL1Q9NZC9 954 aa12.71□□□□□ -0.37
SHMT2-221ENST00000555773 THAP10Q9P2Z0 257 aaPredicted RBP12.71□□□□□ -0.37
SHMT2-221ENST00000555773 DNPEPQ9ULA0 475 aa12.71□□□□□ -0.37
SHMT2-221ENST00000555773 ZNF148Q9UQR1 794 aa12.71□□□□□ -0.37
SHMT2-221ENST00000555773 KIF26AQ9ULI4 1882 aaPredicted RBP12.71□□□□□ -0.37
SHMT2-221ENST00000555773 NCOR1O75376 2440 aa12.71□□□□□ -0.38
SHMT2-221ENST00000555773 DCXO43602 365 aa12.7□□□□□ -0.38
SHMT2-221ENST00000555773 ATP9BO43861 1147 aa12.7□□□□□ -0.38
SHMT2-221ENST00000555773 PHF2O75151 1096 aa12.7□□□□□ -0.38
SHMT2-221ENST00000555773 STK10O94804 968 aaKnown RBP12.7□□□□□ -0.38
SHMT2-221ENST00000555773 CD160O95971 181 aa12.7□□□□□ -0.38
SHMT2-221ENST00000555773 MT-CO1P00395 513 aa12.7□□□□□ -0.38
SHMT2-221ENST00000555773 EGFP01133 1207 aa12.7□□□□□ -0.38
SHMT2-221ENST00000555773 GLDCP23378 1020 aa12.7□□□□□ -0.38
SHMT2-221ENST00000555773 RBL1P28749 1068 aa12.7□□□□□ -0.38
SHMT2-221ENST00000555773 COILP38432 576 aaPredicted RBP12.7□□□□□ -0.38
SHMT2-221ENST00000555773 CTSOP43234 321 aaPredicted RBP12.7□□□□□ -0.38
SHMT2-221ENST00000555773 KIR2DL1P43626 348 aaPredicted RBP12.7□□□□□ -0.38
SHMT2-221ENST00000555773 FNTAP49354 379 aa12.7□□□□□ -0.38
SHMT2-221ENST00000555773 SERPINH1P50454 418 aaKnown RBP12.7□□□□□ -0.38
SHMT2-221ENST00000555773 IFI35P80217 286 aaPredicted RBP12.7□□□□□ -0.38
SHMT2-221ENST00000555773 SIGLEC14Q08ET2 396 aa12.7□□□□□ -0.38
SHMT2-221ENST00000555773 NSUN2Q08J23 767 aaKnown RBP eCLIP12.7□□□□□ -0.38
SHMT2-221ENST00000555773 SNX1Q13596 522 aa12.7□□□□□ -0.38
SHMT2-221ENST00000555773 CCINQ13939 588 aa12.7□□□□□ -0.38
SHMT2-221ENST00000555773 LRRC32Q14392 662 aa12.7□□□□□ -0.38
SHMT2-221ENST00000555773 LBRQ14739 615 aaKnown RBP12.7□□□□□ -0.38
SHMT2-221ENST00000555773 PTPRNQ16849 979 aa12.7□□□□□ -0.38
SHMT2-221ENST00000555773 HSF5Q4G112 596 aaPredicted RBP12.7□□□□□ -0.38
SHMT2-221ENST00000555773 TEX44Q53QW1 395 aa12.7□□□□□ -0.38
SHMT2-221ENST00000555773 HEATR6Q6AI08 1181 aaKnown RBP12.7□□□□□ -0.38
SHMT2-221ENST00000555773 TRMT11Q7Z4G4 463 aaKnown RBP12.7□□□□□ -0.38
SHMT2-221ENST00000555773 PLPP6Q8IY26 295 aa12.7□□□□□ -0.38
SHMT2-221ENST00000555773 SH2D3CQ8N5H7 860 aa12.7□□□□□ -0.38
SHMT2-221ENST00000555773 CEP112Q8N8E3 955 aa12.7□□□□□ -0.38
SHMT2-221ENST00000555773 ATP11CQ8NB49 1132 aa12.7□□□□□ -0.38
SHMT2-221ENST00000555773 ATG4AQ8WYN0 398 aa12.7□□□□□ -0.38
SHMT2-221ENST00000555773 MRGPRX3Q96LB0 322 aa12.7□□□□□ -0.38
SHMT2-221ENST00000555773 IL12RB2Q99665 862 aa12.7□□□□□ -0.38
SHMT2-221ENST00000555773 FAM118BQ9BPY3 351 aa12.7□□□□□ -0.38
SHMT2-221ENST00000555773 LTB4R2Q9NPC1 389 aa12.7□□□□□ -0.38
SHMT2-221ENST00000555773 SEPT3Q9UH03 358 aa12.7□□□□□ -0.38
SHMT2-221ENST00000555773 SUN2Q9UH99 717 aa12.7□□□□□ -0.38
SHMT2-221ENST00000555773 SLCO3A1Q9UIG8 710 aa12.7□□□□□ -0.38
SHMT2-221ENST00000555773 TRHDEQ9UKU6 1024 aa12.7□□□□□ -0.38
SHMT2-221ENST00000555773 MYOFQ9NZM1 2061 aa12.69□□□□□ -0.38
SHMT2-221ENST00000555773 DOCK4Q8N1I0 1966 aa12.69□□□□□ -0.38
SHMT2-221ENST00000555773 C5orf60A6NFR6 353 aa12.69□□□□□ -0.38
SHMT2-221ENST00000555773 FAM170BA6NMN3 283 aa12.69□□□□□ -0.38
SHMT2-221ENST00000555773 NEBLO76041 1014 aa12.69□□□□□ -0.38
SHMT2-221ENST00000555773 JCHAINP01591 159 aa12.69□□□□□ -0.38
SHMT2-221ENST00000555773 SRCP12931 536 aa12.69□□□□□ -0.38
SHMT2-221ENST00000555773 CD72P21854 359 aa12.69□□□□□ -0.38
SHMT2-221ENST00000555773 CES1P23141 567 aa12.69□□□□□ -0.38
SHMT2-221ENST00000555773 HSPA9P38646 679 aaKnown RBP12.69□□□□□ -0.38
SHMT2-221ENST00000555773 ENPP2Q13822 863 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms