RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 C3orf62Q6ZUJ4 267 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 POLNQ7Z5Q5 900 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 PM20D2Q8IYS1 436 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 RORBQ92753 470 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 TOP1MTQ969P6 601 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 E2F7Q96AV8 911 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 ELMO3Q96BJ8 720 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 ZHX1-C8orf76Q96EF9 292 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 RADILQ96JH8 1075 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 NMUR2Q9GZQ4 415 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 TCF7L2Q9NQB0 619 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 ACSS2Q9NR19 701 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 PCDHA4Q9UN74 947 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 NR2E1Q9Y466 385 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 CYP2D7A0A087X1C5 515 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 POM121BA6NF01 834 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 SNAP23O00161 211 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 LBPP18428 481 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 RPL17P18621 184 aaKnown RBP9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 PKLRP30613 574 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 STARP49675 285 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 GALCP54803 685 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 NOMO3P69849 1222 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 XIAPP98170 497 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 ENPEPQ07075 957 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 NOMO1Q15155 1222 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 CDKL4Q5MAI5 379 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 ZNF704Q6ZNC4 412 aaPredicted RBP9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 TTC29Q8NA56 475 aaPredicted RBP9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 FBXL13Q8NEE6 735 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 SPON1Q9HCB6 807 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 PLA2G4CQ9UP65 541 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 YTHDC2Q9H6S0 1430 aaKnown RBP9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 PRR5-ARHGAP8B1AHC4 643 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 KPNA6O60684 536 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 BANF1O75531 89 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 PRKAR2AP13861 404 aaKnown RBP9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 NPR3P17342 541 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 GRIA2P42262 883 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 GTF2IP78347 998 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 ARHGAP8P85298 464 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 FGL1Q08830 312 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 KCNH2Q12809 1159 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 PCBP1Q15365 356 aaKnown RBP eCLIP9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 TRIM69Q86WT6 500 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 MIER2Q8N344 545 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 MAGEE2Q8TD90 523 aaPredicted RBP9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 GAL3ST3Q96A11 431 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 SLC39A13Q96H72 371 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 CNDP2Q96KP4 475 aaKnown RBP9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 ZFP42Q96MM3 310 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 COG8Q96MW5 612 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 ARHGAP20Q9P2F6 1191 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 DNAJC12Q9UKB3 198 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 CEPT1Q9Y6K0 416 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 MYO3BQ8WXR4 1341 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 SYNGAP1Q96PV0 1343 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 EHBP1L1Q8N3D4 1523 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 SOCS7O14512 581 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 SYN3O14994 580 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 TM7SF2O76062 418 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 STARD3NLO95772 234 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 AGR2O95994 175 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 IL7P13232 177 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 ZNF235Q14590 738 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 CDO1Q16878 200 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 LSM12Q3MHD2 195 aaKnown RBP9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 ZBED5Q49AG3 693 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 CYP27C1Q4G0S4 372 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 UGT2A3Q6UWM9 527 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 SLC29A1Q99808 456 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 SLA2Q9H6Q3 261 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 MCUBQ9NWR8 336 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 CA5BQ9Y2D0 317 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 PLEKHG1Q9ULL1 1385 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 ASXL2Q76L83 1435 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 LY86O95711 162 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 FAM86B2P0C5J1 330 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 RGS7P49802 495 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 TPMTP51580 245 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 NAB2Q15742 525 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 PLEKHG7Q6ZR37 379 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 CHST15Q7LFX5 561 aaPredicted RBP9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 NT5DC4Q86YG4 428 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 MARVELD2Q8N4S9 558 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 DAGLBQ8NCG7 672 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 GIMAP1Q8WWP7 306 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 ADAMTS14Q8WXS8 1223 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 MUC3BQ9H195 1237 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 SARS2Q9NP81 518 aaKnown RBP9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 UHRF1BP1LA0JNW5 1464 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 SNAPC4Q5SXM2 1469 aa9.13□□□□□ -0.95
GTF2A1-203ENST00000553612 DNAJA2O60884 412 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 PDGFAP04085 211 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 LCKP06239 509 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 SRGNP10124 158 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 TEAD4Q15561 434 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 ABCB5Q2M3G0 1257 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 KANK2Q63ZY3 851 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 PDPK2PQ6A1A2 396 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms