RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 EDN1P05305 212 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 C2P06681 752 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 OR1D2P34982 312 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 CRHR2Q13324 411 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 LAMB3Q13751 1172 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 GALNT3Q14435 633 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 CDCA2Q69YH5 1023 aaPredicted RBP15.24■□□□□ 0.03
CUX1-214ENST00000550008 IZUMO2Q6UXV1 221 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 BNC2Q6ZN30 1099 aaPredicted RBP15.24■□□□□ 0.03
CUX1-214ENST00000550008 OR6K2Q8NGY2 324 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 CLPBQ9H078 707 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 XPR1Q9UBH6 696 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 UXTQ9UBK9 157 aaPredicted RBP15.24■□□□□ 0.03
CUX1-214ENST00000550008 FBXO5Q9UKT4 447 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 SYNDIG1LA6NDD5 238 aa15.23■□□□□ 0.03
CUX1-214ENST00000550008 RBP1P09455 135 aa15.23■□□□□ 0.03
CUX1-214ENST00000550008 ATP5C1P36542 298 aaKnown RBP15.23■□□□□ 0.03
CUX1-214ENST00000550008 CDH13P55290 713 aa15.23■□□□□ 0.03
CUX1-214ENST00000550008 KCNK10P57789 538 aa15.23■□□□□ 0.03
CUX1-214ENST00000550008 PRKCZQ05513 592 aa15.23■□□□□ 0.03
CUX1-214ENST00000550008 PTK2BQ14289 1009 aa15.23■□□□□ 0.03
CUX1-214ENST00000550008 CCDC153Q494R4 210 aa15.23■□□□□ 0.03
CUX1-214ENST00000550008 PCID2Q5JVF3 399 aa15.23■□□□□ 0.03
CUX1-214ENST00000550008 GLT6D1Q7Z4J2 308 aa15.23■□□□□ 0.03
CUX1-214ENST00000550008 DIS3LQ8TF46 1054 aaKnown RBP15.23■□□□□ 0.03
CUX1-214ENST00000550008 YY1AP1Q9H869 796 aa15.23■□□□□ 0.03
CUX1-214ENST00000550008 MRPL40Q9NQ50 206 aaKnown RBP15.23■□□□□ 0.03
CUX1-214ENST00000550008 ENTPD7Q9NQZ7 604 aa15.23■□□□□ 0.03
CUX1-214ENST00000550008 IRAK4Q9NWZ3 460 aa15.23■□□□□ 0.03
CUX1-214ENST00000550008 CHD4Q14839 1912 aa15.23■□□□□ 0.03
CUX1-214ENST00000550008 UBDO15205 165 aa15.23■□□□□ 0.03
CUX1-214ENST00000550008 MPOP05164 745 aa15.23■□□□□ 0.03
CUX1-214ENST00000550008 SERPIND1P05546 499 aa15.23■□□□□ 0.03
CUX1-214ENST00000550008 ST8SIA6P61647 398 aa15.23■□□□□ 0.03
CUX1-214ENST00000550008 GRIK3Q13003 919 aa15.23■□□□□ 0.03
CUX1-214ENST00000550008 PRKAA1Q13131 559 aa15.23■□□□□ 0.03
CUX1-214ENST00000550008 PCBP1Q15365 356 aaKnown RBP eCLIP15.23■□□□□ 0.036e-6■■■■■ 34.5
CUX1-214ENST00000550008 DLG2Q15700 870 aa15.23■□□□□ 0.03
CUX1-214ENST00000550008 TEX44Q53QW1 395 aa15.23■□□□□ 0.03
CUX1-214ENST00000550008 CYP2R1Q6VVX0 501 aa15.23■□□□□ 0.03
CUX1-214ENST00000550008 ZDHHC14Q8IZN3 488 aa15.23■□□□□ 0.03
CUX1-214ENST00000550008 PCDH20Q8N6Y1 951 aaKnown RBP15.23■□□□□ 0.03
CUX1-214ENST00000550008 ZSCAN18Q8TBC5 510 aaPredicted RBP15.23■□□□□ 0.03
CUX1-214ENST00000550008 HDAC10Q969S8 669 aa15.23■□□□□ 0.03
CUX1-214ENST00000550008 NAF1Q96HR8 494 aaKnown RBP15.23■□□□□ 0.03
CUX1-214ENST00000550008 ZNF333Q96JL9 665 aa15.23■□□□□ 0.03
CUX1-214ENST00000550008 PEBP4Q96S96 227 aa15.23■□□□□ 0.03
CUX1-214ENST00000550008 HNRNPABQ99729 332 aaKnown RBP15.23■□□□□ 0.03
CUX1-214ENST00000550008 MID1IP1Q9NPA3 183 aa15.23■□□□□ 0.03
CUX1-214ENST00000550008 GMIPQ9P107 970 aa15.23■□□□□ 0.03
CUX1-214ENST00000550008 UBA2Q9UBT2 640 aaPredicted RBP15.23■□□□□ 0.03
CUX1-214ENST00000550008 SNX13Q9Y5W8 968 aa15.23■□□□□ 0.03
CUX1-214ENST00000550008 STX5Q13190 355 aa15.23■□□□□ 0.03
CUX1-214ENST00000550008 SYTL3Q4VX76 610 aa15.23■□□□□ 0.03
CUX1-214ENST00000550008 SCIMPQ6UWF3 145 aa15.23■□□□□ 0.03
CUX1-214ENST00000550008 WDTC1Q8N5D0 677 aa15.23■□□□□ 0.03
CUX1-214ENST00000550008 BRD8Q9H0E9 1235 aa15.23■□□□□ 0.03
CUX1-214ENST00000550008 DYRK4Q9NR20 520 aa15.23■□□□□ 0.03
CUX1-214ENST00000550008 ARL8BQ9NVJ2 186 aa15.23■□□□□ 0.03
CUX1-214ENST00000550008 FAM53CQ9NYF3 392 aa15.23■□□□□ 0.03
CUX1-214ENST00000550008 CYTH4Q9UIA0 394 aa15.23■□□□□ 0.03
CUX1-214ENST00000550008 KIAA0100Q14667 2235 aaKnown RBP15.23■□□□□ 0.03
CUX1-214ENST00000550008 H0YGN5 161 aa15.22■□□□□ 0.03
CUX1-214ENST00000550008 HOXA2O43364 376 aa15.22■□□□□ 0.03
CUX1-214ENST00000550008 CSH1P0DML2 217 aa15.22■□□□□ 0.03
CUX1-214ENST00000550008 CSH2P0DML3 217 aa15.22■□□□□ 0.03
CUX1-214ENST00000550008 RPL17P18621 184 aaKnown RBP15.22■□□□□ 0.03
CUX1-214ENST00000550008 MAP4P27816 1152 aaKnown RBP15.22■□□□□ 0.03
CUX1-214ENST00000550008 ABCE1P61221 599 aaKnown RBP15.22■□□□□ 0.03
CUX1-214ENST00000550008 PFKFB4Q16877 469 aa15.22■□□□□ 0.03
CUX1-214ENST00000550008 LRRC23Q53EV4 343 aaPredicted RBP15.22■□□□□ 0.03
CUX1-214ENST00000550008 FBXO48Q5FWF7 155 aa15.22■□□□□ 0.03
CUX1-214ENST00000550008 RFWD3Q6PCD5 774 aa15.22■□□□□ 0.03
CUX1-214ENST00000550008 DCLRE1AQ6PJP8 1040 aa15.22■□□□□ 0.03
CUX1-214ENST00000550008 CDRT15Q96T59 188 aa15.22■□□□□ 0.03
CUX1-214ENST00000550008 UBXN6Q9BZV1 441 aa15.22■□□□□ 0.03
CUX1-214ENST00000550008 WDR55Q9H6Y2 383 aaPredicted RBP15.22■□□□□ 0.03
CUX1-214ENST00000550008 MORF4L1Q9UBU8 362 aa15.22■□□□□ 0.03
CUX1-214ENST00000550008 NFS1Q9Y697 457 aa15.22■□□□□ 0.03
CUX1-214ENST00000550008 SH3BGRLO75368 114 aa15.22■□□□□ 0.03
CUX1-214ENST00000550008 ZBTB48P10074 688 aaPredicted RBP15.22■□□□□ 0.03
CUX1-214ENST00000550008 PTPN9P43378 593 aa15.22■□□□□ 0.03
CUX1-214ENST00000550008 PITX1P78337 314 aaPredicted RBP15.22■□□□□ 0.03
CUX1-214ENST00000550008 VWA5B1Q5TIE3 1220 aa15.22■□□□□ 0.03
CUX1-214ENST00000550008 RNF43Q68DV7 783 aa15.22■□□□□ 0.03
CUX1-214ENST00000550008 FAM228AQ86W67 206 aa15.22■□□□□ 0.03
CUX1-214ENST00000550008 CNDP1Q96KN2 507 aa15.22■□□□□ 0.03
CUX1-214ENST00000550008 POLR1EQ9GZS1 481 aaKnown RBP15.22■□□□□ 0.03
CUX1-214ENST00000550008 PIGVQ9NUD9 493 aa15.22■□□□□ 0.03
CUX1-214ENST00000550008 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.22■□□□□ 0.031e-6■■■■□ 23.3
CUX1-214ENST00000550008 PRR5-ARHGAP8B1AHC4 643 aa15.22■□□□□ 0.03
CUX1-214ENST00000550008 KRT36O76013 467 aa15.22■□□□□ 0.03
CUX1-214ENST00000550008 TOMM70O94826 608 aa15.22■□□□□ 0.03
CUX1-214ENST00000550008 RAG1P15918 1043 aa15.22■□□□□ 0.03
CUX1-214ENST00000550008 L1CAMP32004 1257 aa15.22■□□□□ 0.03
CUX1-214ENST00000550008 ABL2P42684 1182 aa15.22■□□□□ 0.03
CUX1-214ENST00000550008 GRIA4P48058 902 aa15.22■□□□□ 0.03
CUX1-214ENST00000550008 EPHB3P54753 998 aa15.22■□□□□ 0.03
CUX1-214ENST00000550008 DAOAP59103 153 aa15.22■□□□□ 0.03
CUX1-214ENST00000550008 ARHGAP8P85298 464 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms