RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 GTF2A2P52657 109 aa23.5■■□□□ 1.35
NPAS3-206ENST00000548645 NDST2P52849 883 aa23.5■■□□□ 1.35
NPAS3-206ENST00000548645 NAGLUP54802 743 aa23.5■■□□□ 1.35
NPAS3-206ENST00000548645 MPP3Q13368 585 aa23.5■■□□□ 1.35
NPAS3-206ENST00000548645 PATL1Q86TB9 770 aaKnown RBP23.5■■□□□ 1.35
NPAS3-206ENST00000548645 TMEM135Q86UB9 458 aa23.5■■□□□ 1.35
NPAS3-206ENST00000548645 TRIM50Q86XT4 487 aa23.5■■□□□ 1.35
NPAS3-206ENST00000548645 RNF168Q8IYW5 571 aaPredicted RBP23.5■■□□□ 1.35
NPAS3-206ENST00000548645 ACSS2Q9NR19 701 aa23.5■■□□□ 1.35
NPAS3-206ENST00000548645 FAM49BQ9NUQ9 324 aa23.5■■□□□ 1.35
NPAS3-206ENST00000548645 TLK1Q9UKI8 766 aa23.5■■□□□ 1.35
NPAS3-206ENST00000548645 ANKRD6Q9Y2G4 727 aa23.5■■□□□ 1.35
NPAS3-206ENST00000548645 HEMK1Q9Y5R4 338 aaPredicted RBP23.5■■□□□ 1.35
NPAS3-206ENST00000548645 TK2O00142 265 aa23.5■■□□□ 1.35
NPAS3-206ENST00000548645 CSPG5O95196 566 aa23.5■■□□□ 1.35
NPAS3-206ENST00000548645 ABCG1P45844 678 aa23.5■■□□□ 1.35
NPAS3-206ENST00000548645 PSMD8P48556 350 aa23.5■■□□□ 1.35
NPAS3-206ENST00000548645 ESRRGP62508 458 aa23.5■■□□□ 1.35
NPAS3-206ENST00000548645 KIZQ2M2Z5 673 aa23.5■■□□□ 1.35
NPAS3-206ENST00000548645 ZNF567Q8N184 647 aa23.5■■□□□ 1.35
NPAS3-206ENST00000548645 CCNYQ8ND76 341 aa23.5■■□□□ 1.35
NPAS3-206ENST00000548645 RCOR3Q9P2K3 495 aaPredicted RBP23.5■■□□□ 1.35
NPAS3-206ENST00000548645 SNX9Q9Y5X1 595 aa23.5■■□□□ 1.35
NPAS3-206ENST00000548645 STT3AP46977 705 aa23.49■■□□□ 1.35
NPAS3-206ENST00000548645 RBP5P82980 135 aa23.49■■□□□ 1.35
NPAS3-206ENST00000548645 MYO1HQ8N1T3 1032 aa23.49■■□□□ 1.35
NPAS3-206ENST00000548645 ZBTB8BQ8NAP8 495 aaPredicted RBP23.49■■□□□ 1.35
NPAS3-206ENST00000548645 RIN3Q8TB24 985 aa23.49■■□□□ 1.35
NPAS3-206ENST00000548645 RANBP9Q96S59 729 aa23.49■■□□□ 1.35
NPAS3-206ENST00000548645 IPO11Q9UI26 975 aaKnown RBP23.49■■□□□ 1.35
NPAS3-206ENST00000548645 BLOC1S6Q9UL45 172 aa23.49■■□□□ 1.35
NPAS3-206ENST00000548645 VANGL2Q9ULK5 521 aa23.49■■□□□ 1.35
NPAS3-206ENST00000548645 SNX13Q9Y5W8 968 aa23.49■■□□□ 1.35
NPAS3-206ENST00000548645 HSPA1AP0DMV8 641 aaKnown RBP23.49■■□□□ 1.35
NPAS3-206ENST00000548645 HSPA1BP0DMV9 641 aaKnown RBP23.49■■□□□ 1.35
NPAS3-206ENST00000548645 NELFEP18615 380 aaKnown RBP23.49■■□□□ 1.35
NPAS3-206ENST00000548645 HADHAP40939 763 aa23.49■■□□□ 1.35
NPAS3-206ENST00000548645 TNFAIP2Q03169 654 aa23.49■■□□□ 1.35
NPAS3-206ENST00000548645 TMEM132DQ14C87 1099 aa23.49■■□□□ 1.35
NPAS3-206ENST00000548645 MAMDC4Q6UXC1 1216 aa23.49■■□□□ 1.35
NPAS3-206ENST00000548645 PYROXD2Q8N2H3 581 aa23.49■■□□□ 1.35
NPAS3-206ENST00000548645 GRIN3AQ8TCU5 1115 aa23.49■■□□□ 1.35
NPAS3-206ENST00000548645 PGLYRP2Q96PD5 576 aa23.49■■□□□ 1.35
NPAS3-206ENST00000548645 HES2Q9Y543 173 aa23.49■■□□□ 1.35
NPAS3-206ENST00000548645 F7P08709 466 aaPredicted RBP23.49■■□□□ 1.35
NPAS3-206ENST00000548645 MBTD1Q05BQ5 628 aa23.49■■□□□ 1.35
NPAS3-206ENST00000548645 ITGA7Q13683 1181 aa23.49■■□□□ 1.35
NPAS3-206ENST00000548645 GPR141Q7Z602 305 aa23.49■■□□□ 1.35
NPAS3-206ENST00000548645 VPS39Q96JC1 886 aa23.49■■□□□ 1.35
NPAS3-206ENST00000548645 EFHD1Q9BUP0 239 aa23.49■■□□□ 1.35
NPAS3-206ENST00000548645 ANKRD60Q9BZ19 345 aa23.49■■□□□ 1.35
NPAS3-206ENST00000548645 PCDHGA7Q9Y5G6 932 aa23.49■■□□□ 1.35
NPAS3-206ENST00000548645 PCDHGA4Q9Y5G9 962 aa23.49■■□□□ 1.35
NPAS3-206ENST00000548645 ZCWPW2A0A1B0GU75 182 aa23.48■■□□□ 1.35
NPAS3-206ENST00000548645 GABBR2O75899 941 aa23.48■■□□□ 1.35
NPAS3-206ENST00000548645 DDHD2O94830 711 aa23.48■■□□□ 1.35
NPAS3-206ENST00000548645 CBX3Q13185 183 aa23.48■■□□□ 1.35
NPAS3-206ENST00000548645 SLC26A9Q7LBE3 791 aa23.48■■□□□ 1.35
NPAS3-206ENST00000548645 PID1Q7Z2X4 250 aa23.48■■□□□ 1.35
NPAS3-206ENST00000548645 DEFB132Q7Z7B7 95 aa23.48■■□□□ 1.35
NPAS3-206ENST00000548645 SCYL1Q96KG9 808 aa23.48■■□□□ 1.35
NPAS3-206ENST00000548645 PDGFDQ9GZP0 370 aaPredicted RBP23.48■■□□□ 1.35
NPAS3-206ENST00000548645 UNC93B1Q9H1C4 597 aa23.48■■□□□ 1.35
NPAS3-206ENST00000548645 SLC39A10Q9ULF5 831 aa23.48■■□□□ 1.35
NPAS3-206ENST00000548645 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.48■■□□□ 1.35
NPAS3-206ENST00000548645 JUNP05412 331 aaKnown RBP23.48■■□□□ 1.35
NPAS3-206ENST00000548645 GJB1P08034 283 aa23.48■■□□□ 1.35
NPAS3-206ENST00000548645 CD97P48960 835 aa23.48■■□□□ 1.35
NPAS3-206ENST00000548645 ENTPD1P49961 510 aa23.48■■□□□ 1.35
NPAS3-206ENST00000548645 C16orf72Q14CZ0 275 aa23.48■■□□□ 1.35
NPAS3-206ENST00000548645 ANO4Q32M45 955 aa23.48■■□□□ 1.35
NPAS3-206ENST00000548645 SLC44A4Q53GD3 710 aa23.48■■□□□ 1.35
NPAS3-206ENST00000548645 ACOT1Q86TX2 421 aa23.48■■□□□ 1.35
NPAS3-206ENST00000548645 MINDY3Q9H8M7 445 aa23.48■■□□□ 1.35
NPAS3-206ENST00000548645 AS3MTQ9HBK9 375 aa23.48■■□□□ 1.35
NPAS3-206ENST00000548645 PHIPQ8WWQ0 1821 aa23.48■■□□□ 1.35
NPAS3-206ENST00000548645 TRIP11Q15643 1979 aa23.47■■□□□ 1.35
NPAS3-206ENST00000548645 MCF2P10911 925 aa23.47■■□□□ 1.35
NPAS3-206ENST00000548645 FGFR3P22607 806 aa23.47■■□□□ 1.35
NPAS3-206ENST00000548645 SLC7A1P30825 629 aa23.47■■□□□ 1.35
NPAS3-206ENST00000548645 TRAP1Q12931 704 aaKnown RBP23.47■■□□□ 1.35
NPAS3-206ENST00000548645 TNFAIP1Q13829 316 aa23.47■■□□□ 1.35
NPAS3-206ENST00000548645 MTX3Q5HYI7 312 aa23.47■■□□□ 1.35
NPAS3-206ENST00000548645 GLRA4Q5JXX5 417 aa23.47■■□□□ 1.35
NPAS3-206ENST00000548645 HERC6Q8IVU3 1022 aa23.47■■□□□ 1.35
NPAS3-206ENST00000548645 FIBCD1Q8N539 461 aa23.47■■□□□ 1.35
NPAS3-206ENST00000548645 PCDH20Q8N6Y1 951 aaKnown RBP23.47■■□□□ 1.35
NPAS3-206ENST00000548645 DNAAF3Q8N9W5 541 aa23.47■■□□□ 1.35
NPAS3-206ENST00000548645 SLC29A1Q99808 456 aa23.47■■□□□ 1.35
NPAS3-206ENST00000548645 PCDHAC1Q9H158 963 aa23.47■■□□□ 1.35
NPAS3-206ENST00000548645 ARHGEF38Q9NXL2 777 aa23.47■■□□□ 1.35
NPAS3-206ENST00000548645 TUBA8Q9NY65 449 aaPredicted RBP23.47■■□□□ 1.35
NPAS3-206ENST00000548645 TRPC5OSA6NMA1 111 aa23.47■■□□□ 1.35
NPAS3-206ENST00000548645 FAM155AB1AL88 458 aaPredicted RBP23.47■■□□□ 1.35
NPAS3-206ENST00000548645 ZBTB42B2RXF5 422 aa23.47■■□□□ 1.35
NPAS3-206ENST00000548645 HTRA2O43464 458 aaPredicted RBP23.47■■□□□ 1.35
NPAS3-206ENST00000548645 STAU1O95793 577 aaKnown RBP23.47■■□□□ 1.35
NPAS3-206ENST00000548645 STX5Q13190 355 aa23.47■■□□□ 1.35
NPAS3-206ENST00000548645 OLIG2Q13516 323 aa23.47■■□□□ 1.35
NPAS3-206ENST00000548645 PTAR1Q7Z6K3 402 aaPredicted RBP23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms