RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 RBM44Q6ZP01 1051 aaKnown RBP15.11■□□□□ 0.01
RTN3-214ENST00000545432 Q6ZSR6 202 aa15.11■□□□□ 0.01
RTN3-214ENST00000545432 Q6ZVU0 165 aa15.11■□□□□ 0.01
RTN3-214ENST00000545432 WDR36Q8NI36 951 aaKnown RBP15.11■□□□□ 0.01
RTN3-214ENST00000545432 WDR48Q8TAF3 677 aa15.11■□□□□ 0.01
RTN3-214ENST00000545432 ARRDC3Q96B67 414 aa15.11■□□□□ 0.01
RTN3-214ENST00000545432 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.11■□□□□ 0.01
RTN3-214ENST00000545432 SRRTQ9BXP5 876 aaKnown RBP15.11■□□□□ 0.01
RTN3-214ENST00000545432 CALN1Q9BXU9 219 aa15.11■□□□□ 0.01
RTN3-214ENST00000545432 SLC4A5Q9BY07 1137 aa15.11■□□□□ 0.01
RTN3-214ENST00000545432 HDAC8Q9BY41 377 aa15.11■□□□□ 0.01
RTN3-214ENST00000545432 CFAP45Q9UL16 551 aa15.11■□□□□ 0.01
RTN3-214ENST00000545432 TBC1D30Q9Y2I9 924 aa15.11■□□□□ 0.01
RTN3-214ENST00000545432 TDRD6O60522 2096 aaKnown RBP15.11■□□□□ 0.01
RTN3-214ENST00000545432 RP1P56715 2156 aa15.11■□□□□ 0.01
RTN3-214ENST00000545432 A0A1B0GVL5 298 aa15.1■□□□□ 0.01
RTN3-214ENST00000545432 PMS2P1A4D2B8 440 aa15.1■□□□□ 0.01
RTN3-214ENST00000545432 A6NNZ2 444 aa15.1■□□□□ 0.01
RTN3-214ENST00000545432 F5H5T6 163 aa15.1■□□□□ 0.01
RTN3-214ENST00000545432 RNF103O00237 685 aa15.1■□□□□ 0.01
RTN3-214ENST00000545432 NTN3O00634 580 aaPredicted RBP15.1■□□□□ 0.01
RTN3-214ENST00000545432 SLC16A3O15427 465 aaKnown RBP15.1■□□□□ 0.01
RTN3-214ENST00000545432 NOBOXO60393 691 aa15.1■□□□□ 0.01
RTN3-214ENST00000545432 NEBLO76041 1014 aa15.1■□□□□ 0.01
RTN3-214ENST00000545432 TRUB2O95900 331 aaKnown RBP15.1■□□□□ 0.01
RTN3-214ENST00000545432 F13A1P00488 732 aa15.1■□□□□ 0.01
RTN3-214ENST00000545432 ITGB2P05107 769 aa15.1■□□□□ 0.01
RTN3-214ENST00000545432 ITGA2BP08514 1039 aa15.1■□□□□ 0.01
RTN3-214ENST00000545432 ZSCAN22P10073 491 aaPredicted RBP15.1■□□□□ 0.01
RTN3-214ENST00000545432 EPB41P11171 864 aaKnown RBP15.1■□□□□ 0.01
RTN3-214ENST00000545432 KRT10P13645 584 aa15.1■□□□□ 0.01
RTN3-214ENST00000545432 CHRNA3P32297 505 aa15.1■□□□□ 0.01
RTN3-214ENST00000545432 ACADSBP45954 432 aa15.1■□□□□ 0.01
RTN3-214ENST00000545432 CLDN2P57739 230 aa15.1■□□□□ 0.01
RTN3-214ENST00000545432 FGL2Q14314 439 aa15.1■□□□□ 0.01
RTN3-214ENST00000545432 TMEM270Q6UE05 265 aa15.1■□□□□ 0.01
RTN3-214ENST00000545432 TMEM110Q86TL2 294 aa15.1■□□□□ 0.01
RTN3-214ENST00000545432 ARL14Q8N4G2 192 aa15.1■□□□□ 0.01
RTN3-214ENST00000545432 ATP6V0D2Q8N8Y2 350 aa15.1■□□□□ 0.01
RTN3-214ENST00000545432 ZNF548Q8NEK5 533 aaPredicted RBP15.1■□□□□ 0.01
RTN3-214ENST00000545432 OR2A12Q8NGT7 310 aa15.1■□□□□ 0.01
RTN3-214ENST00000545432 KLK6Q92876 244 aa15.1■□□□□ 0.01
RTN3-214ENST00000545432 SLC35C1Q96A29 364 aa15.1■□□□□ 0.01
RTN3-214ENST00000545432 TBATAQ96M53 351 aa15.1■□□□□ 0.01
RTN3-214ENST00000545432 LENG8Q96PV6 779 aaPredicted RBP15.1■□□□□ 0.01
RTN3-214ENST00000545432 TRIM62Q9BVG3 475 aa15.1■□□□□ 0.01
RTN3-214ENST00000545432 BOCQ9BWV1 1114 aa15.1■□□□□ 0.01
RTN3-214ENST00000545432 MIS12Q9H081 205 aa15.1■□□□□ 0.01
RTN3-214ENST00000545432 FZD3Q9NPG1 666 aa15.1■□□□□ 0.01
RTN3-214ENST00000545432 KLF15Q9UIH9 416 aa15.1■□□□□ 0.01
RTN3-214ENST00000545432 SLC25A13Q9UJS0 675 aa15.1■□□□□ 0.01
RTN3-214ENST00000545432 DOPEY2Q9Y3R5 2298 aa15.1■□□□□ 0.01
RTN3-214ENST00000545432 POM121BA6NF01 834 aa15.09■□□□□ 0.01
RTN3-214ENST00000545432 M0QYV0 167 aa15.09■□□□□ 0.01
RTN3-214ENST00000545432 SRCP12931 536 aa15.09■□□□□ 0.01
RTN3-214ENST00000545432 C1QBPQ07021 282 aaKnown RBP15.09■□□□□ 0.01
RTN3-214ENST00000545432 NFATC3Q12968 1075 aa15.09■□□□□ 0.01
RTN3-214ENST00000545432 CDKN3Q16667 212 aa15.09■□□□□ 0.01
RTN3-214ENST00000545432 KIF26BQ2KJY2 2108 aa15.09■□□□□ 0.01
RTN3-214ENST00000545432 ACCSLQ4AC99 568 aa15.09■□□□□ 0.01
RTN3-214ENST00000545432 COBLL1Q53SF7 1204 aa15.09■□□□□ 0.01
RTN3-214ENST00000545432 ZNF542PQ5EBM4 170 aa15.09■□□□□ 0.01
RTN3-214ENST00000545432 RABGAP1LQ5R372 815 aa15.09■□□□□ 0.01
RTN3-214ENST00000545432 EFL1Q7Z2Z2 1120 aaKnown RBP15.09■□□□□ 0.01
RTN3-214ENST00000545432 PRICKLE2Q7Z3G6 844 aa15.09■□□□□ 0.01
RTN3-214ENST00000545432 ZSCAN30Q86W11 494 aa15.09■□□□□ 0.01
RTN3-214ENST00000545432 CIR1Q86X95 450 aaPredicted RBP15.09■□□□□ 0.01
RTN3-214ENST00000545432 LMO3Q8TAP4 145 aa15.09■□□□□ 0.01
RTN3-214ENST00000545432 ASB12Q8WXK4 309 aa15.09■□□□□ 0.01
RTN3-214ENST00000545432 CCDC47Q96A33 483 aaKnown RBP15.09■□□□□ 0.01
RTN3-214ENST00000545432 LIN37Q96GY3 246 aaPredicted RBP15.09■□□□□ 0.01
RTN3-214ENST00000545432 KLF6Q99612 283 aaPredicted RBP15.09■□□□□ 0.01
RTN3-214ENST00000545432 POPDC2Q9HBU9 364 aa15.09■□□□□ 0.01
RTN3-214ENST00000545432 FOXD4L1Q9NU39 408 aa15.09■□□□□ 0.01
RTN3-214ENST00000545432 DNAJC28Q9NX36 388 aa15.09■□□□□ 0.01
RTN3-214ENST00000545432 SLC12A6Q9UHW9 1150 aa15.09■□□□□ 0.01
RTN3-214ENST00000545432 CNTN6Q9UQ52 1028 aa15.09■□□□□ 0.01
RTN3-214ENST00000545432 CCDC187A0A096LP49 1063 aa15.08■□□□□ 0
RTN3-214ENST00000545432 K7ELQ4 463 aaPredicted RBP15.08■□□□□ 0
RTN3-214ENST00000545432 AQP9O43315 295 aa15.08■□□□□ 0
RTN3-214ENST00000545432 TNFSF15O95150 251 aa15.08■□□□□ 0
RTN3-214ENST00000545432 MT-CO1P00395 513 aa15.08■□□□□ 0
RTN3-214ENST00000545432 SLC2A3P11169 496 aa15.08■□□□□ 0
RTN3-214ENST00000545432 ZNF18P17022 549 aa15.08■□□□□ 0
RTN3-214ENST00000545432 BRD2P25440 801 aaKnown RBP15.08■□□□□ 0
RTN3-214ENST00000545432 YWHAZP63104 245 aaKnown RBP15.08■□□□□ 0
RTN3-214ENST00000545432 PITX1P78337 314 aaPredicted RBP15.08■□□□□ 0
RTN3-214ENST00000545432 NUCB2P80303 420 aa15.08■□□□□ 0
RTN3-214ENST00000545432 MTA1Q13330 715 aa15.08■□□□□ 0
RTN3-214ENST00000545432 PERM1Q5SV97 790 aa15.08■□□□□ 0
RTN3-214ENST00000545432 SEL1L3Q68CR1 1132 aa15.08■□□□□ 0
RTN3-214ENST00000545432 ATG14Q6ZNE5 492 aa15.08■□□□□ 0
RTN3-214ENST00000545432 ERN2Q76MJ5 926 aaKnown RBP15.08■□□□□ 0
RTN3-214ENST00000545432 PARGQ86W56 976 aa15.08■□□□□ 0
RTN3-214ENST00000545432 PSMB7Q99436 277 aa15.08■□□□□ 0
RTN3-214ENST00000545432 MYOCQ99972 504 aa15.08■□□□□ 0
RTN3-214ENST00000545432 C1QTNF2Q9BXJ5 285 aa15.08■□□□□ 0
RTN3-214ENST00000545432 SLC17A9Q9BYT1 436 aa15.08■□□□□ 0
RTN3-214ENST00000545432 FAM117AQ9C073 453 aa15.08■□□□□ 0
RTN3-214ENST00000545432 THAP9Q9H5L6 903 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms