RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 FAM84AQ96KN4 292 aa9.74□□□□□ -0.85
YBX3-211ENST00000541351 SMYD3Q9H7B4 428 aa9.74□□□□□ -0.85
YBX3-211ENST00000541351 GPR27Q9NS67 375 aa9.74□□□□□ -0.85
YBX3-211ENST00000541351 FAM49BQ9NUQ9 324 aa9.74□□□□□ -0.85
YBX3-211ENST00000541351 USP3Q9Y6I4 520 aa9.74□□□□□ -0.85
YBX3-211ENST00000541351 SVILO95425 2214 aa9.73□□□□□ -0.85
YBX3-211ENST00000541351 HHLA1C9JL84 531 aa9.73□□□□□ -0.85
YBX3-211ENST00000541351 INPP4BO15327 924 aa9.73□□□□□ -0.85
YBX3-211ENST00000541351 EIF3DO15371 548 aaKnown RBP eCLIP9.73□□□□□ -0.85
YBX3-211ENST00000541351 JAK2O60674 1132 aa9.73□□□□□ -0.85
YBX3-211ENST00000541351 RFPL1O75677 317 aa9.73□□□□□ -0.85
YBX3-211ENST00000541351 RNF224P0DH78 156 aa9.73□□□□□ -0.85
YBX3-211ENST00000541351 PNLIPP16233 465 aa9.73□□□□□ -0.85
YBX3-211ENST00000541351 MAP4P27816 1152 aaKnown RBP9.73□□□□□ -0.85
YBX3-211ENST00000541351 UGT1A3P35503 534 aa9.73□□□□□ -0.85
YBX3-211ENST00000541351 PER3P56645 1201 aa9.73□□□□□ -0.85
YBX3-211ENST00000541351 CLDN2P57739 230 aa9.73□□□□□ -0.85
YBX3-211ENST00000541351 RPS21P63220 83 aaKnown RBP9.73□□□□□ -0.85
YBX3-211ENST00000541351 CENPCQ03188 943 aa9.73□□□□□ -0.85
YBX3-211ENST00000541351 MCM6Q14566 821 aa9.73□□□□□ -0.85
YBX3-211ENST00000541351 CLPPQ16740 277 aaPredicted RBP9.73□□□□□ -0.85
YBX3-211ENST00000541351 EIF2S3LQ2VIR3 472 aaKnown RBP9.73□□□□□ -0.85
YBX3-211ENST00000541351 OR6B2Q6IFH4 312 aa9.73□□□□□ -0.85
YBX3-211ENST00000541351 KIAA1161Q6NSJ0 714 aa9.73□□□□□ -0.85
YBX3-211ENST00000541351 CARNMT1Q8N4J0 409 aa9.73□□□□□ -0.85
YBX3-211ENST00000541351 ZSWIM2Q8NEG5 633 aa9.73□□□□□ -0.85
YBX3-211ENST00000541351 FBXO18Q8NFZ0 1043 aa9.73□□□□□ -0.85
YBX3-211ENST00000541351 CYFIP2Q96F07 1278 aa9.73□□□□□ -0.85
YBX3-211ENST00000541351 FEM1CQ96JP0 617 aa9.73□□□□□ -0.85
YBX3-211ENST00000541351 TEFMQ96QE5 360 aaKnown RBP9.73□□□□□ -0.85
YBX3-211ENST00000541351 DDA1Q9BW61 102 aa9.73□□□□□ -0.85
YBX3-211ENST00000541351 STRA6Q9BX79 667 aa9.73□□□□□ -0.85
YBX3-211ENST00000541351 TRIT1Q9H3H1 467 aaKnown RBP9.73□□□□□ -0.85
YBX3-211ENST00000541351 FZD3Q9NPG1 666 aa9.73□□□□□ -0.85
YBX3-211ENST00000541351 OLFML3Q9NRN5 406 aa9.73□□□□□ -0.85
YBX3-211ENST00000541351 STIM2Q9P246 746 aa9.73□□□□□ -0.85
YBX3-211ENST00000541351 MAP4K5Q9Y4K4 846 aa9.73□□□□□ -0.85
YBX3-211ENST00000541351 SPG11Q96JI7 2443 aa9.73□□□□□ -0.85
YBX3-211ENST00000541351 ADGRG4Q8IZF6 3080 aa9.72□□□□□ -0.85
YBX3-211ENST00000541351 A0A1W2PQM1 296 aa9.72□□□□□ -0.85
YBX3-211ENST00000541351 ARHGAP10A1A4S6 786 aa9.72□□□□□ -0.85
YBX3-211ENST00000541351 TOR1BO14657 336 aa9.72□□□□□ -0.85
YBX3-211ENST00000541351 MCF2LO15068 1137 aa9.72□□□□□ -0.85
YBX3-211ENST00000541351 NKX2-8O15522 239 aa9.72□□□□□ -0.85
YBX3-211ENST00000541351 RAD1O60671 282 aa9.72□□□□□ -0.85
YBX3-211ENST00000541351 LRCH4O75427 683 aa9.72□□□□□ -0.85
YBX3-211ENST00000541351 ETV5P41161 510 aa9.72□□□□□ -0.85
YBX3-211ENST00000541351 NDST1P52848 882 aa9.72□□□□□ -0.85
YBX3-211ENST00000541351 RAB15P59190 212 aa9.72□□□□□ -0.85
YBX3-211ENST00000541351 MYL6P60660 151 aa9.72□□□□□ -0.85
YBX3-211ENST00000541351 SGCGQ13326 291 aa9.72□□□□□ -0.85
YBX3-211ENST00000541351 BIRC3Q13489 604 aa9.72□□□□□ -0.85
YBX3-211ENST00000541351 ELOAQ14241 798 aaKnown RBP9.72□□□□□ -0.85
YBX3-211ENST00000541351 IL17AQ16552 155 aa9.72□□□□□ -0.85
YBX3-211ENST00000541351 SNRNP35Q16560 246 aaKnown RBP9.72□□□□□ -0.85
YBX3-211ENST00000541351 MAP9Q49MG5 647 aa9.72□□□□□ -0.85
YBX3-211ENST00000541351 ACCSLQ4AC99 568 aa9.72□□□□□ -0.85
YBX3-211ENST00000541351 RILPL1Q5EBL4 403 aa9.72□□□□□ -0.85
YBX3-211ENST00000541351 FAXCQ5TGI0 409 aa9.72□□□□□ -0.85
YBX3-211ENST00000541351 PIM3Q86V86 326 aa9.72□□□□□ -0.85
YBX3-211ENST00000541351 GKN2Q86XP6 184 aa9.72□□□□□ -0.85
YBX3-211ENST00000541351 CBWD2Q8IUF1 395 aa9.72□□□□□ -0.85
YBX3-211ENST00000541351 MCEMP1Q8IX19 187 aa9.72□□□□□ -0.85
YBX3-211ENST00000541351 TP53INP2Q8IXH6 220 aa9.72□□□□□ -0.85
YBX3-211ENST00000541351 NECAB1Q8N987 351 aa9.72□□□□□ -0.85
YBX3-211ENST00000541351 WFDC5Q8TCV5 224 aa9.72□□□□□ -0.85
YBX3-211ENST00000541351 KLK6Q92876 244 aa9.72□□□□□ -0.85
YBX3-211ENST00000541351 ERCC4Q92889 916 aaPredicted RBP9.72□□□□□ -0.85
YBX3-211ENST00000541351 AZIN2Q96A70 460 aa9.72□□□□□ -0.85
YBX3-211ENST00000541351 NOX5Q96PH1 765 aa9.72□□□□□ -0.85
YBX3-211ENST00000541351 SLCO3A1Q9UIG8 710 aa9.72□□□□□ -0.85
YBX3-211ENST00000541351 SLC25A13Q9UJS0 675 aa9.72□□□□□ -0.85
YBX3-211ENST00000541351 APPL1Q9UKG1 709 aa9.72□□□□□ -0.85
YBX3-211ENST00000541351 PPM1HQ9ULR3 514 aa9.72□□□□□ -0.85
YBX3-211ENST00000541351 YY2O15391 372 aa9.71□□□□□ -0.86
YBX3-211ENST00000541351 DTNBO60941 627 aa9.71□□□□□ -0.86
YBX3-211ENST00000541351 CTSEP14091 401 aa9.71□□□□□ -0.86
YBX3-211ENST00000541351 GLB1P16278 677 aa9.71□□□□□ -0.86
YBX3-211ENST00000541351 VASPP50552 380 aaPredicted RBP9.71□□□□□ -0.86
YBX3-211ENST00000541351 NUCB2P80303 420 aa9.71□□□□□ -0.86
YBX3-211ENST00000541351 HMGN5P82970 282 aaKnown RBP9.71□□□□□ -0.86
YBX3-211ENST00000541351 KCNA1Q09470 495 aa9.71□□□□□ -0.86
YBX3-211ENST00000541351 ARHGEF7Q14155 803 aa9.71□□□□□ -0.86
YBX3-211ENST00000541351 PSMD6Q15008 389 aa9.71□□□□□ -0.86
YBX3-211ENST00000541351 ZRANB3Q5FWF4 1079 aa9.71□□□□□ -0.86
YBX3-211ENST00000541351 DCAF12Q5T6F0 453 aa9.71□□□□□ -0.86
YBX3-211ENST00000541351 SPNS3Q6ZMD2 512 aa9.71□□□□□ -0.86
YBX3-211ENST00000541351 SCARA5Q6ZMJ2 495 aa9.71□□□□□ -0.86
YBX3-211ENST00000541351 RD3Q7Z3Z2 195 aa9.71□□□□□ -0.86
YBX3-211ENST00000541351 TMPRSS9Q7Z410 1059 aa9.71□□□□□ -0.86
YBX3-211ENST00000541351 GDF7Q7Z4P5 450 aa9.71□□□□□ -0.86
YBX3-211ENST00000541351 PHACTR4Q8IZ21 702 aa9.71□□□□□ -0.86
YBX3-211ENST00000541351 NLGN4XQ8N0W4 816 aa9.71□□□□□ -0.86
YBX3-211ENST00000541351 C12orf29Q8N999 325 aa9.71□□□□□ -0.86
YBX3-211ENST00000541351 FAM184AQ8NB25 1140 aa9.71□□□□□ -0.86
YBX3-211ENST00000541351 DENND6BQ8NEG7 585 aa9.71□□□□□ -0.86
YBX3-211ENST00000541351 NLGN4YQ8NFZ3 816 aaPredicted RBP9.71□□□□□ -0.86
YBX3-211ENST00000541351 KCTD13Q8WZ19 329 aa9.71□□□□□ -0.86
YBX3-211ENST00000541351 STARD8Q92502 1023 aa9.71□□□□□ -0.86
YBX3-211ENST00000541351 TAF4BQ92750 862 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms