RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 C9IYK1 514 aa13.9□□□□□ -0.18
BNIP3-202ENST00000540159 BUD23O43709 281 aaKnown RBP13.9□□□□□ -0.18
BNIP3-202ENST00000540159 GSTA2P09210 222 aa13.9□□□□□ -0.18
BNIP3-202ENST00000540159 COX4I1P13073 169 aa13.9□□□□□ -0.18
BNIP3-202ENST00000540159 SERPINB8P50452 374 aa13.9□□□□□ -0.18
BNIP3-202ENST00000540159 GJA9P57773 515 aa13.9□□□□□ -0.18
BNIP3-202ENST00000540159 MRPS22P82650 360 aaKnown RBP13.9□□□□□ -0.18
BNIP3-202ENST00000540159 DLG1Q12959 904 aa13.9□□□□□ -0.18
BNIP3-202ENST00000540159 CNGA3Q16281 694 aa13.9□□□□□ -0.18
BNIP3-202ENST00000540159 TAC4Q86UU9 113 aa13.9□□□□□ -0.18
BNIP3-202ENST00000540159 EXT2Q93063 718 aa13.9□□□□□ -0.18
BNIP3-202ENST00000540159 MAF1Q9H063 256 aa13.9□□□□□ -0.18
BNIP3-202ENST00000540159 TCF7L2Q9NQB0 619 aa13.9□□□□□ -0.18
BNIP3-202ENST00000540159 ZDHHC2Q9UIJ5 367 aa13.9□□□□□ -0.18
BNIP3-202ENST00000540159 PLXNA1Q9UIW2 1896 aa13.9□□□□□ -0.18
BNIP3-202ENST00000540159 MYADML2A6NDP7 307 aa13.9□□□□□ -0.18
BNIP3-202ENST00000540159 MLNP12872 115 aa13.9□□□□□ -0.18
BNIP3-202ENST00000540159 CNTFP26441 200 aa13.9□□□□□ -0.18
BNIP3-202ENST00000540159 SOX11P35716 441 aa13.9□□□□□ -0.18
BNIP3-202ENST00000540159 KLF10Q13118 480 aa13.9□□□□□ -0.18
BNIP3-202ENST00000540159 IRGCQ6NXR0 463 aa13.9□□□□□ -0.18
BNIP3-202ENST00000540159 TFAP2DQ7Z6R9 452 aa13.9□□□□□ -0.18
BNIP3-202ENST00000540159 GPR152Q8TDT2 470 aa13.9□□□□□ -0.18
BNIP3-202ENST00000540159 GDPD5Q8WTR4 605 aa13.9□□□□□ -0.18
BNIP3-202ENST00000540159 MS4A4AQ96JQ5 239 aa13.9□□□□□ -0.18
BNIP3-202ENST00000540159 BRD8Q9H0E9 1235 aa13.9□□□□□ -0.18
BNIP3-202ENST00000540159 VCXQ9H320 206 aa13.9□□□□□ -0.18
BNIP3-202ENST00000540159 S100A14Q9HCY8 104 aa13.9□□□□□ -0.18
BNIP3-202ENST00000540159 MKS1Q9NXB0 559 aa13.9□□□□□ -0.18
BNIP3-202ENST00000540159 GDAP2Q9NXN4 497 aa13.9□□□□□ -0.18
BNIP3-202ENST00000540159 XPR1Q9UBH6 696 aa13.9□□□□□ -0.18
BNIP3-202ENST00000540159 CAPN8A6NHC0 703 aa13.89□□□□□ -0.19
BNIP3-202ENST00000540159 IL1BP01584 269 aa13.89□□□□□ -0.19
BNIP3-202ENST00000540159 AHSGP02765 367 aa13.89□□□□□ -0.19
BNIP3-202ENST00000540159 GABRB3P28472 473 aa13.89□□□□□ -0.19
BNIP3-202ENST00000540159 ITKQ08881 620 aa13.89□□□□□ -0.19
BNIP3-202ENST00000540159 ZRSR2Q15696 482 aaKnown RBP13.89□□□□□ -0.19
BNIP3-202ENST00000540159 LSM12Q3MHD2 195 aaKnown RBP13.89□□□□□ -0.19
BNIP3-202ENST00000540159 GRTP1Q5TC63 336 aa13.89□□□□□ -0.19
BNIP3-202ENST00000540159 C4orf22Q6V702 233 aa13.89□□□□□ -0.19
BNIP3-202ENST00000540159 PLEKHH3Q7Z736 793 aa13.89□□□□□ -0.19
BNIP3-202ENST00000540159 CEP97Q8IW35 865 aa13.89□□□□□ -0.19
BNIP3-202ENST00000540159 NXNL1Q96CM4 212 aa13.89□□□□□ -0.19
BNIP3-202ENST00000540159 FICDQ9BVA6 458 aa13.89□□□□□ -0.19
BNIP3-202ENST00000540159 CDH19Q9H159 772 aa13.89□□□□□ -0.19
BNIP3-202ENST00000540159 PCDHGB4Q9UN71 923 aa13.89□□□□□ -0.19
BNIP3-202ENST00000540159 PCDHGB5Q9Y5G0 923 aa13.89□□□□□ -0.19
BNIP3-202ENST00000540159 RRN3P2A6NIE6 340 aa13.89□□□□□ -0.19
BNIP3-202ENST00000540159 TRIM13O60858 407 aa13.89□□□□□ -0.19
BNIP3-202ENST00000540159 KLHL2O95198 593 aa13.89□□□□□ -0.19
BNIP3-202ENST00000540159 F2P00734 622 aa13.89□□□□□ -0.19
BNIP3-202ENST00000540159 LYNP07948 512 aa13.89□□□□□ -0.19
BNIP3-202ENST00000540159 PSEN2P49810 448 aa13.89□□□□□ -0.19
BNIP3-202ENST00000540159 ZNF789Q5FWF6 425 aa13.89□□□□□ -0.19
BNIP3-202ENST00000540159 SPANXN3Q5MJ09 141 aa13.89□□□□□ -0.19
BNIP3-202ENST00000540159 OR52E8Q6IFG1 317 aa13.89□□□□□ -0.19
BNIP3-202ENST00000540159 LAYNQ6UX15 382 aa13.89□□□□□ -0.19
BNIP3-202ENST00000540159 CXCL17Q6UXB2 119 aa13.89□□□□□ -0.19
BNIP3-202ENST00000540159 SHCBP1Q8NEM2 672 aa13.89□□□□□ -0.19
BNIP3-202ENST00000540159 ZSCAN18Q8TBC5 510 aaPredicted RBP13.89□□□□□ -0.19
BNIP3-202ENST00000540159 RCN3Q96D15 328 aa13.89□□□□□ -0.19
BNIP3-202ENST00000540159 CDRT15Q96T59 188 aa13.89□□□□□ -0.19
BNIP3-202ENST00000540159 TMLHEQ9NVH6 421 aa13.89□□□□□ -0.19
BNIP3-202ENST00000540159 GTSE1Q9NYZ3 720 aa13.89□□□□□ -0.19
BNIP3-202ENST00000540159 DERAQ9Y315 318 aa13.89□□□□□ -0.19
BNIP3-202ENST00000540159 PAFAH1B3Q15102 231 aaKnown RBP13.89□□□□□ -0.19
BNIP3-202ENST00000540159 FBXO48Q5FWF7 155 aa13.89□□□□□ -0.19
BNIP3-202ENST00000540159 DHDDSQ86SQ9 333 aa13.89□□□□□ -0.19
BNIP3-202ENST00000540159 FSTL5Q8N475 847 aaPredicted RBP13.89□□□□□ -0.19
BNIP3-202ENST00000540159 MYLPFQ96A32 169 aa13.89□□□□□ -0.19
BNIP3-202ENST00000540159 PHF21BQ96EK2 531 aa13.89□□□□□ -0.19
BNIP3-202ENST00000540159 NPAS2Q99743 824 aa13.89□□□□□ -0.19
BNIP3-202ENST00000540159 IGSF9Q9P2J2 1179 aa13.89□□□□□ -0.19
BNIP3-202ENST00000540159 FBXW11Q9UKB1 542 aa13.89□□□□□ -0.19
BNIP3-202ENST00000540159 RPL26L1Q9UNX3 145 aaKnown RBP13.89□□□□□ -0.19
BNIP3-202ENST00000540159 ATP6AP2A0A1C7CYW4 349 aa13.88□□□□□ -0.19
BNIP3-202ENST00000540159 CCDC189A1A4V9 331 aa13.88□□□□□ -0.19
BNIP3-202ENST00000540159 XPOTO43592 962 aaKnown RBP13.88□□□□□ -0.19
BNIP3-202ENST00000540159 ATP6AP2O75787 350 aa13.88□□□□□ -0.19
BNIP3-202ENST00000540159 PGM3O95394 542 aa13.88□□□□□ -0.19
BNIP3-202ENST00000540159 ITGB1P05556 798 aa13.88□□□□□ -0.19
BNIP3-202ENST00000540159 GRK2P25098 689 aa13.88□□□□□ -0.19
BNIP3-202ENST00000540159 TIGD5Q53EQ6 642 aa13.88□□□□□ -0.19
BNIP3-202ENST00000540159 TMEM135Q86UB9 458 aa13.88□□□□□ -0.19
BNIP3-202ENST00000540159 ACMSDQ8TDX5 336 aa13.88□□□□□ -0.19
BNIP3-202ENST00000540159 ZNF483Q8TF39 744 aaPredicted RBP13.88□□□□□ -0.19
BNIP3-202ENST00000540159 C9JVG2 144 aa13.88□□□□□ -0.19
BNIP3-202ENST00000540159 PGK1P00558 417 aa13.88□□□□□ -0.19
BNIP3-202ENST00000540159 PNPLA4P41247 253 aa13.88□□□□□ -0.19
BNIP3-202ENST00000540159 NME5P56597 212 aa13.88□□□□□ -0.19
BNIP3-202ENST00000540159 RASIP1Q5U651 963 aa13.88□□□□□ -0.19
BNIP3-202ENST00000540159 TMC7Q7Z402 723 aa13.88□□□□□ -0.19
BNIP3-202ENST00000540159 MFSD6LQ8IWD5 586 aa13.88□□□□□ -0.19
BNIP3-202ENST00000540159 GALNT4Q8N4A0 578 aa13.88□□□□□ -0.19
BNIP3-202ENST00000540159 OR6Y1Q8NGX8 325 aa13.88□□□□□ -0.19
BNIP3-202ENST00000540159 CMTM5Q96DZ9 223 aa13.88□□□□□ -0.19
BNIP3-202ENST00000540159 ELMO2Q96JJ3 720 aa13.88□□□□□ -0.19
BNIP3-202ENST00000540159 GBP5Q96PP8 586 aa13.88□□□□□ -0.19
BNIP3-202ENST00000540159 ST3GAL5Q9UNP4 418 aa13.88□□□□□ -0.19
BNIP3-202ENST00000540159 PCDHB12Q9Y5F1 795 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms