RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 ATP9BO43861 1147 aa12.98□□□□□ -0.33
TSPAN9-207ENST00000539631 MFSD11O43934 449 aa12.98□□□□□ -0.33
TSPAN9-207ENST00000539631 SYNCRIPO60506 623 aaKnown RBP12.98□□□□□ -0.33
TSPAN9-207ENST00000539631 SIN3BO75182 1162 aa12.98□□□□□ -0.33
TSPAN9-207ENST00000539631 VAV1P15498 845 aa12.98□□□□□ -0.33
TSPAN9-207ENST00000539631 GABRG2P18507 467 aa12.98□□□□□ -0.33
TSPAN9-207ENST00000539631 FNTBP49356 437 aa12.98□□□□□ -0.33
TSPAN9-207ENST00000539631 CAMK2GQ13555 558 aaPredicted RBP12.98□□□□□ -0.33
TSPAN9-207ENST00000539631 PAFAH1B3Q15102 231 aaKnown RBP12.98□□□□□ -0.33
TSPAN9-207ENST00000539631 LLGL1Q15334 1064 aa12.98□□□□□ -0.33
TSPAN9-207ENST00000539631 DLG2Q15700 870 aa12.98□□□□□ -0.33
TSPAN9-207ENST00000539631 HNRNPA1L2Q32P51 320 aaKnown RBP12.98□□□□□ -0.33
TSPAN9-207ENST00000539631 ZNF528Q3MIS6 628 aa12.98□□□□□ -0.33
TSPAN9-207ENST00000539631 ANO7Q6IWH7 933 aa12.98□□□□□ -0.33
TSPAN9-207ENST00000539631 SPOCD1Q6ZMY3 1216 aa12.98□□□□□ -0.33
TSPAN9-207ENST00000539631 ARHGAP36Q6ZRI8 547 aa12.98□□□□□ -0.33
TSPAN9-207ENST00000539631 RASSF3Q86WH2 238 aa12.98□□□□□ -0.33
TSPAN9-207ENST00000539631 RFX6Q8HWS3 928 aa12.98□□□□□ -0.33
TSPAN9-207ENST00000539631 REXO1L1PQ8IX06 675 aa12.98□□□□□ -0.33
TSPAN9-207ENST00000539631 MDGA1Q8NFP4 955 aa12.98□□□□□ -0.33
TSPAN9-207ENST00000539631 FRS2Q8WU20 508 aa12.98□□□□□ -0.33
TSPAN9-207ENST00000539631 HMGB4Q8WW32 186 aa12.98□□□□□ -0.33
TSPAN9-207ENST00000539631 PTPRN2Q92932 1015 aa12.98□□□□□ -0.33
TSPAN9-207ENST00000539631 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.98□□□□□ -0.33
TSPAN9-207ENST00000539631 CACNA1AO00555 2505 aa12.97□□□□□ -0.33
TSPAN9-207ENST00000539631 EDDM13A0A1B0GTR0 161 aa12.97□□□□□ -0.33
TSPAN9-207ENST00000539631 TARSL2A2RTX5 802 aaKnown RBP12.97□□□□□ -0.33
TSPAN9-207ENST00000539631 CCDC66A2RUB6 948 aa12.97□□□□□ -0.33
TSPAN9-207ENST00000539631 DDX3YO15523 660 aaKnown RBP12.97□□□□□ -0.33
TSPAN9-207ENST00000539631 ALDH1A2O94788 518 aa12.97□□□□□ -0.33
TSPAN9-207ENST00000539631 ZRANB2O95218 330 aaKnown RBP eCLIP12.97□□□□□ -0.33
TSPAN9-207ENST00000539631 KRT10P13645 584 aa12.97□□□□□ -0.33
TSPAN9-207ENST00000539631 NDUFV2P19404 249 aa12.97□□□□□ -0.33
TSPAN9-207ENST00000539631 HOXA6P31267 233 aa12.97□□□□□ -0.33
TSPAN9-207ENST00000539631 SERPINB6P35237 376 aa12.97□□□□□ -0.33
TSPAN9-207ENST00000539631 CDKN2BP42772 138 aa12.97□□□□□ -0.33
TSPAN9-207ENST00000539631 SERPINH1P50454 418 aaKnown RBP12.97□□□□□ -0.33
TSPAN9-207ENST00000539631 PEX5P50542 639 aa12.97□□□□□ -0.33
TSPAN9-207ENST00000539631 COPAP53621 1224 aa12.97□□□□□ -0.33
TSPAN9-207ENST00000539631 SLC20A2Q08357 652 aa12.97□□□□□ -0.33
TSPAN9-207ENST00000539631 TAZQ16635 292 aa12.97□□□□□ -0.33
TSPAN9-207ENST00000539631 C9orf64Q5T6V5 341 aa12.97□□□□□ -0.33
TSPAN9-207ENST00000539631 WDR5BQ86VZ2 330 aa12.97□□□□□ -0.33
TSPAN9-207ENST00000539631 VSIG1Q86XK7 387 aa12.97□□□□□ -0.33
TSPAN9-207ENST00000539631 CCDC50Q8IVM0 306 aa12.97□□□□□ -0.33
TSPAN9-207ENST00000539631 RCOR2Q8IZ40 523 aa12.97□□□□□ -0.33
TSPAN9-207ENST00000539631 STK40Q8N2I9 435 aa12.97□□□□□ -0.33
TSPAN9-207ENST00000539631 PGBD3Q8N328 593 aa12.97□□□□□ -0.33
TSPAN9-207ENST00000539631 OR2T3Q8NH03 318 aa12.97□□□□□ -0.33
TSPAN9-207ENST00000539631 EXD1Q8NHP7 514 aa12.97□□□□□ -0.33
TSPAN9-207ENST00000539631 NELL1Q92832 810 aa12.97□□□□□ -0.33
TSPAN9-207ENST00000539631 MAK16Q9BXY0 300 aaKnown RBP12.97□□□□□ -0.33
TSPAN9-207ENST00000539631 TPSD1Q9BZJ3 242 aa12.97□□□□□ -0.33
TSPAN9-207ENST00000539631 KCNH6Q9H252 994 aa12.97□□□□□ -0.33
TSPAN9-207ENST00000539631 PDFQ9HBH1 243 aa12.97□□□□□ -0.33
TSPAN9-207ENST00000539631 BCCIPQ9P287 314 aaKnown RBP eCLIP12.97□□□□□ -0.33
TSPAN9-207ENST00000539631 PYCARDQ9ULZ3 195 aa12.97□□□□□ -0.33
TSPAN9-207ENST00000539631 FCF1Q9Y324 198 aaKnown RBP12.97□□□□□ -0.33
TSPAN9-207ENST00000539631 PLXND1Q9Y4D7 1925 aa12.96□□□□□ -0.33
TSPAN9-207ENST00000539631 hCG_1818297A0A087WSY0 165 aa12.96□□□□□ -0.33
TSPAN9-207ENST00000539631 CXorf51AA0A1B0GTR3 108 aa12.96□□□□□ -0.33
TSPAN9-207ENST00000539631 ZSCAN5CA6NGD5 496 aaPredicted RBP12.96□□□□□ -0.33
TSPAN9-207ENST00000539631 AXIN1O15169 862 aa12.96□□□□□ -0.33
TSPAN9-207ENST00000539631 BNIP3LO60238 219 aa12.96□□□□□ -0.33
TSPAN9-207ENST00000539631 PRAMEF11O60813 436 aa12.96□□□□□ -0.33
TSPAN9-207ENST00000539631 ZNF821O75541 412 aaPredicted RBP12.96□□□□□ -0.33
TSPAN9-207ENST00000539631 MAP3K6O95382 1288 aa12.96□□□□□ -0.33
TSPAN9-207ENST00000539631 CLCN6P51797 869 aa12.96□□□□□ -0.33
TSPAN9-207ENST00000539631 NRLP54845 237 aa12.96□□□□□ -0.33
TSPAN9-207ENST00000539631 RWDD2BP57060 319 aa12.96□□□□□ -0.33
TSPAN9-207ENST00000539631 GEMIN4P57678 1058 aaKnown RBP12.96□□□□□ -0.33
TSPAN9-207ENST00000539631 GBE1Q04446 702 aa12.96□□□□□ -0.33
TSPAN9-207ENST00000539631 TFDP3Q5H9I0 405 aa12.96□□□□□ -0.33
TSPAN9-207ENST00000539631 KAZNQ674X7 775 aa12.96□□□□□ -0.33
TSPAN9-207ENST00000539631 SLC9A4Q6AI14 798 aa12.96□□□□□ -0.33
TSPAN9-207ENST00000539631 AADACL2Q6P093 401 aa12.96□□□□□ -0.33
TSPAN9-207ENST00000539631 C22orf39Q6P5X5 142 aa12.96□□□□□ -0.33
TSPAN9-207ENST00000539631 NPNTQ6UXI9 565 aa12.96□□□□□ -0.33
TSPAN9-207ENST00000539631 Q6ZVU0 165 aa12.96□□□□□ -0.33
TSPAN9-207ENST00000539631 LONP2Q86WA8 852 aa12.96□□□□□ -0.33
TSPAN9-207ENST00000539631 CACUL1Q86Y37 369 aa12.96□□□□□ -0.33
TSPAN9-207ENST00000539631 TMPRSS6Q8IU80 811 aa12.96□□□□□ -0.33
TSPAN9-207ENST00000539631 PLD5Q8N7P1 536 aa12.96□□□□□ -0.33
TSPAN9-207ENST00000539631 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.96□□□□□ -0.33
TSPAN9-207ENST00000539631 ALG3Q92685 438 aa12.96□□□□□ -0.33
TSPAN9-207ENST00000539631 HES6Q96HZ4 224 aa12.96□□□□□ -0.33
TSPAN9-207ENST00000539631 RBM41Q96IZ5 413 aaKnown RBP12.96□□□□□ -0.33
TSPAN9-207ENST00000539631 MRGPRX1Q96LB2 322 aa12.96□□□□□ -0.33
TSPAN9-207ENST00000539631 MKRN2Q9H000 416 aaKnown RBP12.96□□□□□ -0.33
TSPAN9-207ENST00000539631 TNKS2Q9H2K2 1166 aa12.96□□□□□ -0.33
TSPAN9-207ENST00000539631 PRDM16Q9HAZ2 1276 aa12.96□□□□□ -0.33
TSPAN9-207ENST00000539631 SP110Q9HB58 689 aa12.96□□□□□ -0.33
TSPAN9-207ENST00000539631 ZSCAN32Q9NX65 697 aa12.96□□□□□ -0.33
TSPAN9-207ENST00000539631 TRMT1Q9NXH9 659 aaKnown RBP12.96□□□□□ -0.33
TSPAN9-207ENST00000539631 UBA2Q9UBT2 640 aaPredicted RBP12.96□□□□□ -0.33
TSPAN9-207ENST00000539631 EBF1Q9UH73 591 aa12.96□□□□□ -0.33
TSPAN9-207ENST00000539631 IPO11Q9UI26 975 aaKnown RBP12.96□□□□□ -0.33
TSPAN9-207ENST00000539631 ZDBF2Q9HCK1 2354 aa12.95□□□□□ -0.34
TSPAN9-207ENST00000539631 MIF4GDA9UHW6 222 aaKnown RBP12.95□□□□□ -0.34
TSPAN9-207ENST00000539631 APOL1O14791 398 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms