RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 VPS51Q9UID3 782 aa12.83□□□□□ -0.36
VAMP1-206ENST00000538970 SNX10Q9Y5X0 201 aa12.83□□□□□ -0.36
VAMP1-206ENST00000538970 APC2O95996 2303 aa12.83□□□□□ -0.36
VAMP1-206ENST00000538970 DRGXA6NNA5 263 aa12.82□□□□□ -0.36
VAMP1-206ENST00000538970 E9PAM4 449 aa12.82□□□□□ -0.36
VAMP1-206ENST00000538970 BNIP3LO60238 219 aa12.82□□□□□ -0.36
VAMP1-206ENST00000538970 MT-CO1P00395 513 aa12.82□□□□□ -0.36
VAMP1-206ENST00000538970 CYP11B1P15538 503 aa12.82□□□□□ -0.36
VAMP1-206ENST00000538970 ZNF18P17022 549 aa12.82□□□□□ -0.36
VAMP1-206ENST00000538970 GABRB2P47870 512 aa12.82□□□□□ -0.36
VAMP1-206ENST00000538970 CLDN6P56747 220 aa12.82□□□□□ -0.36
VAMP1-206ENST00000538970 BPIFB4P59827 614 aa12.82□□□□□ -0.36
VAMP1-206ENST00000538970 RNASE9P60153 205 aaKnown RBP12.82□□□□□ -0.36
VAMP1-206ENST00000538970 KRT83P78385 493 aa12.82□□□□□ -0.36
VAMP1-206ENST00000538970 DEUP1Q05D60 604 aa12.82□□□□□ -0.36
VAMP1-206ENST00000538970 OVGP1Q12889 678 aa12.82□□□□□ -0.36
VAMP1-206ENST00000538970 BNIP3Q12983 259 aa12.82□□□□□ -0.36
VAMP1-206ENST00000538970 RAPGEF1Q13905 1077 aa12.82□□□□□ -0.36
VAMP1-206ENST00000538970 DPCR1Q3MIW9 517 aa12.82□□□□□ -0.36
VAMP1-206ENST00000538970 VWA3BQ502W6 1294 aa12.82□□□□□ -0.36
VAMP1-206ENST00000538970 SETMARQ53H47 684 aaPredicted RBP12.82□□□□□ -0.36
VAMP1-206ENST00000538970 ARTNQ5T4W7 220 aa12.82□□□□□ -0.36
VAMP1-206ENST00000538970 FAM102AQ5T9C2 384 aaPredicted RBP12.82□□□□□ -0.36
VAMP1-206ENST00000538970 SETD3Q86TU7 594 aaPredicted RBP12.82□□□□□ -0.36
VAMP1-206ENST00000538970 XYLT1Q86Y38 959 aa12.82□□□□□ -0.36
VAMP1-206ENST00000538970 DCAF4L2Q8NA75 395 aa12.82□□□□□ -0.36
VAMP1-206ENST00000538970 ATP11CQ8NB49 1132 aa12.82□□□□□ -0.36
VAMP1-206ENST00000538970 OR2A12Q8NGT7 310 aa12.82□□□□□ -0.36
VAMP1-206ENST00000538970 TSC1Q92574 1164 aa12.82□□□□□ -0.36
VAMP1-206ENST00000538970 TBCBQ99426 244 aa12.82□□□□□ -0.36
VAMP1-206ENST00000538970 TUBGCP2Q9BSJ2 902 aa12.82□□□□□ -0.36
VAMP1-206ENST00000538970 PDCL3Q9H2J4 239 aa12.82□□□□□ -0.36
VAMP1-206ENST00000538970 TMPRSS4Q9NRS4 437 aa12.82□□□□□ -0.36
VAMP1-206ENST00000538970 PAXBP1Q9Y5B6 917 aa12.82□□□□□ -0.36
VAMP1-206ENST00000538970 FHOD1Q9Y613 1164 aa12.82□□□□□ -0.36
VAMP1-206ENST00000538970 IGLV3-10A0A075B6K4 115 aa12.81□□□□□ -0.36
VAMP1-206ENST00000538970 A0A0D9SEW6 157 aa12.81□□□□□ -0.36
VAMP1-206ENST00000538970 PRAMEF26H0Y7S4 382 aa12.81□□□□□ -0.36
VAMP1-206ENST00000538970 K7ERQ8 282 aa12.81□□□□□ -0.36
VAMP1-206ENST00000538970 MAGEC1O60732 1142 aa12.81□□□□□ -0.36
VAMP1-206ENST00000538970 RNGTTO60942 597 aaKnown RBP12.81□□□□□ -0.36
VAMP1-206ENST00000538970 F9P00740 461 aa12.81□□□□□ -0.36
VAMP1-206ENST00000538970 C1SP09871 688 aa12.81□□□□□ -0.36
VAMP1-206ENST00000538970 CDK4P11802 303 aa12.81□□□□□ -0.36
VAMP1-206ENST00000538970 PRKCSHP14314 528 aaPredicted RBP12.81□□□□□ -0.36
VAMP1-206ENST00000538970 RRM1P23921 792 aa12.81□□□□□ -0.36
VAMP1-206ENST00000538970 ERCC5P28715 1186 aaPredicted RBP12.81□□□□□ -0.36
VAMP1-206ENST00000538970 CHRNA3P32297 505 aa12.81□□□□□ -0.36
VAMP1-206ENST00000538970 HNF1BP35680 557 aa12.81□□□□□ -0.36
VAMP1-206ENST00000538970 FLT3P36888 993 aa12.81□□□□□ -0.36
VAMP1-206ENST00000538970 CLCN6P51797 869 aa12.81□□□□□ -0.36
VAMP1-206ENST00000538970 KCNMA1Q12791 1236 aa12.81□□□□□ -0.36
VAMP1-206ENST00000538970 STAT4Q14765 748 aa12.81□□□□□ -0.36
VAMP1-206ENST00000538970 DRAP1Q14919 205 aaPredicted RBP12.81□□□□□ -0.36
VAMP1-206ENST00000538970 SLC25A52Q3SY17 297 aa12.81□□□□□ -0.36
VAMP1-206ENST00000538970 HSP90AA4PQ58FG1 418 aa12.81□□□□□ -0.36
VAMP1-206ENST00000538970 C6orf118Q5T5N4 469 aa12.81□□□□□ -0.36
VAMP1-206ENST00000538970 TRNP1Q6NT89 227 aa12.81□□□□□ -0.36
VAMP1-206ENST00000538970 C22orf39Q6P5X5 142 aa12.81□□□□□ -0.36
VAMP1-206ENST00000538970 BNIPLQ7Z465 357 aa12.81□□□□□ -0.36
VAMP1-206ENST00000538970 TFAP2DQ7Z6R9 452 aa12.81□□□□□ -0.36
VAMP1-206ENST00000538970 TMEM145Q8NBT3 493 aa12.81□□□□□ -0.36
VAMP1-206ENST00000538970 ARRDC3Q96B67 414 aa12.81□□□□□ -0.36
VAMP1-206ENST00000538970 NXPE2Q96DL1 559 aa12.81□□□□□ -0.36
VAMP1-206ENST00000538970 C18orf8Q96DM3 657 aa12.81□□□□□ -0.36
VAMP1-206ENST00000538970 C1orf74Q96LT6 269 aa12.81□□□□□ -0.36
VAMP1-206ENST00000538970 CCDC114Q96M63 670 aa12.81□□□□□ -0.36
VAMP1-206ENST00000538970 NAA15Q9BXJ9 866 aaKnown RBP12.81□□□□□ -0.36
VAMP1-206ENST00000538970 CLSTN2Q9H4D0 955 aa12.81□□□□□ -0.36
VAMP1-206ENST00000538970 MPP6Q9NZW5 540 aa12.81□□□□□ -0.36
VAMP1-206ENST00000538970 ZNF212Q9UDV6 495 aa12.81□□□□□ -0.36
VAMP1-206ENST00000538970 CA5BQ9Y2D0 317 aa12.81□□□□□ -0.36
VAMP1-206ENST00000538970 A0A087WV48 116 aa12.8□□□□□ -0.36
VAMP1-206ENST00000538970 A0A1W2PQU0 124 aa12.8□□□□□ -0.36
VAMP1-206ENST00000538970 FAM170AA1A519 330 aa12.8□□□□□ -0.36
VAMP1-206ENST00000538970 RNF103O00237 685 aa12.8□□□□□ -0.36
VAMP1-206ENST00000538970 KPNA3O00505 521 aaPredicted RBP12.8□□□□□ -0.36
VAMP1-206ENST00000538970 SMAD6O43541 496 aaKnown RBP12.8□□□□□ -0.36
VAMP1-206ENST00000538970 LSM8O95777 96 aaKnown RBP12.8□□□□□ -0.36
VAMP1-206ENST00000538970 GLDCP23378 1020 aa12.8□□□□□ -0.36
VAMP1-206ENST00000538970 C2CD6Q53TS8 623 aa12.8□□□□□ -0.36
VAMP1-206ENST00000538970 ACBD5Q5T8D3 534 aaPredicted RBP12.8□□□□□ -0.36
VAMP1-206ENST00000538970 KLHDC7AQ5VTJ3 777 aa12.8□□□□□ -0.36
VAMP1-206ENST00000538970 TAF3Q5VWG9 929 aa12.8□□□□□ -0.36
VAMP1-206ENST00000538970 NEK5Q6P3R8 708 aa12.8□□□□□ -0.36
VAMP1-206ENST00000538970 FBXL19Q6PCT2 694 aa12.8□□□□□ -0.36
VAMP1-206ENST00000538970 LRRC31Q6UY01 552 aa12.8□□□□□ -0.36
VAMP1-206ENST00000538970 LINGO4Q6UY18 593 aa12.8□□□□□ -0.36
VAMP1-206ENST00000538970 NOP9Q86U38 636 aaKnown RBP12.8□□□□□ -0.36
VAMP1-206ENST00000538970 ERICH1Q86X53 443 aa12.8□□□□□ -0.36
VAMP1-206ENST00000538970 CHST14Q8NCH0 376 aa12.8□□□□□ -0.36
VAMP1-206ENST00000538970 TMIEQ8NEW7 156 aa12.8□□□□□ -0.36
VAMP1-206ENST00000538970 SLC39A7Q92504 469 aa12.8□□□□□ -0.36
VAMP1-206ENST00000538970 MYOCQ99972 504 aa12.8□□□□□ -0.36
VAMP1-206ENST00000538970 TMEM51Q9NW97 253 aa12.8□□□□□ -0.36
VAMP1-206ENST00000538970 FARP1Q9Y4F1 1045 aaPredicted RBP12.8□□□□□ -0.36
VAMP1-206ENST00000538970 F8VZ95 297 aa12.79□□□□□ -0.36
VAMP1-206ENST00000538970 SDC3O75056 442 aa12.79□□□□□ -0.36
VAMP1-206ENST00000538970 PRNPP04156 253 aa12.79□□□□□ -0.36
VAMP1-206ENST00000538970 THEGLP0DJG4 465 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms