RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 HNRNPA1P09651 372 aaKnown RBP eCLIP4.52□□□□□ -1.69
SNHG1-208ENST00000538266 VDRP11473 427 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 EPCAMP16422 314 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 HOXB8P17481 243 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-208ENST00000538266 ACO1P21399 889 aaKnown RBP4.52□□□□□ -1.69
SNHG1-208ENST00000538266 KCNA5P22460 613 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 BDNFP23560 247 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 CFPP27918 469 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 ADORA2BP29275 332 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 HOXA9P31269 272 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 KRT9P35527 623 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 SOX5P35711 763 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 STAT1P42224 750 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 AFF3P51826 1226 aaKnown RBP4.52□□□□□ -1.69
SNHG1-208ENST00000538266 BCAT1P54687 386 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 CCZ1BP86790 482 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 CCZ1P86791 482 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-208ENST00000538266 SMAD4Q13485 552 aaKnown RBP4.52□□□□□ -1.69
SNHG1-208ENST00000538266 STILQ15468 1287 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 PTPN21Q16825 1174 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 VMACQ2NL98 169 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 GOLGA7BQ2TAP0 167 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 CFAP221Q4G0U5 840 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 SFMBT2Q5VUG0 894 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 CPZQ66K79 652 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 CES5AQ6NT32 575 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 VSTM1Q6UX27 236 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 ITIH5Q86UX2 942 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 VPS36Q86VN1 386 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 TMEM151BQ8IW70 566 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 SCN4BQ8IWT1 228 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 LRRC56Q8IYG6 542 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-208ENST00000538266 TCEAL8Q8IYN2 117 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 FAM71AQ8IYT1 594 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 AHI1Q8N157 1196 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 CCAR2Q8N163 923 aaKnown RBP4.52□□□□□ -1.69
SNHG1-208ENST00000538266 CRYBG2Q8N1P7 616 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 TTC9BQ8N6N2 239 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 LINC00482Q8N8I6 264 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 C12orf29Q8N999 325 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 KYQ8NBH2 561 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 SLC4A11Q8NBS3 891 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 ATAD1Q8NBU5 361 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 ZSCAN18Q8TBC5 510 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-208ENST00000538266 SLC2A14Q8TDB8 520 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 SLC22A17Q8WUG5 538 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 HDAC7Q8WUI4 952 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 MYLPFQ96A32 169 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 PABPC5Q96DU9 382 aaKnown RBP4.52□□□□□ -1.69
SNHG1-208ENST00000538266 CYFIP2Q96F07 1278 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 TWNKQ96RR1 684 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 TMEM209Q96SK2 561 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 RTP3Q9BQQ7 232 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 B3GNT5Q9BYG0 378 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 EDEM3Q9BZQ6 932 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 ZNF518BQ9C0D4 1074 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 GANQ9H2C0 597 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 ZNHIT6Q9NWK9 470 aaKnown RBP4.52□□□□□ -1.69
SNHG1-208ENST00000538266 ZDHHC7Q9NXF8 308 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 EHD2Q9NZN4 543 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 FBXW11Q9UKB1 542 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 MYO6Q9UM54 1294 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 LUC7L2Q9Y383 392 aaKnown RBP4.52□□□□□ -1.69
SNHG1-208ENST00000538266 YIPF1Q9Y548 306 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 INSL5Q9Y5Q6 135 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 PLXNA3P51805 1871 aa4.52□□□□□ -1.69
SNHG1-208ENST00000538266 CCDC195A0A1B0GUA6 201 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 LRRC53A6NM62 1247 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 F8VP50 259 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 M0QYV0 167 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 CBX4O00257 560 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 O00370 1275 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 FOXN3O00409 490 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-208ENST00000538266 CLDN5O00501 218 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 CCL16O15467 120 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 LINC01565O15544 149 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 TBX10O75333 385 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 RFPL2O75678 378 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 SOAT2O75908 522 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 NOL4O94818 638 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 FGF19O95750 216 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 GLP2RO95838 553 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 PLA2G1BP04054 148 aaKnown RBP4.51□□□□□ -1.69
SNHG1-208ENST00000538266 GYPCP04921 128 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 PNMA6AP0CW24 399 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-208ENST00000538266 SETSIPP0DME0 302 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 HAPLN1P10915 354 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-208ENST00000538266 CYP11B1P15538 503 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 FERP16591 822 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 POU3F2P20265 443 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-208ENST00000538266 CYP2F1P24903 491 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 CASP14P31944 242 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 GJA4P35212 333 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 PBX1P40424 430 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 MAGEA11P43364 429 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 SCNN1BP51168 640 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 MECP2P51608 486 aaKnown RBP4.51□□□□□ -1.69
SNHG1-208ENST00000538266 ZNF132P52740 706 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 ITGA1P56199 1179 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 MAP3K7CLP57077 242 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms