RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 TXNDC9O14530 226 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 AURKAO14965 403 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 GJB3O75712 270 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 SERPINE1P05121 402 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 FGF3P11487 239 aaPredicted RBP8.86□□□□□ -0.99
UBE3B-208ENST00000538070 CCR1P32246 355 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 ARL1P40616 181 aaPredicted RBP8.86□□□□□ -0.99
UBE3B-208ENST00000538070 RIPK1Q13546 671 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 PCLAFQ15004 111 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 HSF5Q4G112 596 aaPredicted RBP8.86□□□□□ -0.99
UBE3B-208ENST00000538070 SPDYAQ5MJ70 313 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 FAM171A1Q5VUB5 890 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 TMEM198Q66K66 360 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 RAP1GAP2Q684P5 730 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 C17orf99Q6UX52 265 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 NAPRTQ6XQN6 538 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 SCUBE1Q8IWY4 988 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 TMEM86AQ8N2M4 240 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 PHTF2Q8N3S3 785 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 ZSCAN18Q8TBC5 510 aaPredicted RBP8.86□□□□□ -0.99
UBE3B-208ENST00000538070 SREK1Q8WXA9 508 aaKnown RBP8.86□□□□□ -0.99
UBE3B-208ENST00000538070 RSPH1Q8WYR4 309 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 EXOC2Q96KP1 924 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 CYP2S1Q96SQ9 504 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 MYCBPQ99417 103 aaPredicted RBP8.86□□□□□ -0.99
UBE3B-208ENST00000538070 RTP3Q9BQQ7 232 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 SAR1AQ9NR31 198 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 KCNK4Q9NYG8 393 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 B4GALT3O60512 393 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 TSPAN3O60637 253 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 CNTN5O94779 1100 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 TPBGLP0DKB5 382 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 HNRNPLP14866 589 aaKnown RBP eCLIP8.85□□□□□ -0.992e-7■■□□□ 13.7
UBE3B-208ENST00000538070 ARSAP15289 507 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 CD1EP15812 388 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 SKIV2L2P42285 1042 aaKnown RBP8.85□□□□□ -0.99
UBE3B-208ENST00000538070 SERPINB8P50452 374 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 PAPOLAP51003 745 aaKnown RBP8.85□□□□□ -0.99
UBE3B-208ENST00000538070 ABCE1P61221 599 aaKnown RBP8.85□□□□□ -0.99
UBE3B-208ENST00000538070 CDH17Q12864 832 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 LPIN1Q14693 890 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 PAFAH1B3Q15102 231 aaKnown RBP8.85□□□□□ -0.99
UBE3B-208ENST00000538070 SPANXN3Q5MJ09 141 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 SNX30Q5VWJ9 437 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 PDPK2PQ6A1A2 396 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 NAPEPLDQ6IQ20 393 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 RPRD1AQ96P16 312 aaPredicted RBP8.85□□□□□ -0.99
UBE3B-208ENST00000538070 CPNE1Q99829 537 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 SP110Q9HB58 689 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 SIRPGQ9P1W8 387 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 IPO11Q9UI26 975 aaKnown RBP8.85□□□□□ -0.99
UBE3B-208ENST00000538070 CRYL1Q9Y2S2 319 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 EME2A4GXA9 379 aaPredicted RBP8.85□□□□□ -0.99
UBE3B-208ENST00000538070 TMEM233B4DJY2 109 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 J3KR12 359 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 ARRB2P32121 409 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 CD86P42081 329 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 MAGEA3P43357 314 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 TSNAXIP1Q2TAA8 658 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 MBLAC2Q68D91 279 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 KYAT3Q6YP21 454 aaKnown RBP8.85□□□□□ -0.99
UBE3B-208ENST00000538070 ATG14Q6ZNE5 492 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 MARK2Q7KZI7 788 aaKnown RBP8.85□□□□□ -0.99
UBE3B-208ENST00000538070 DEFB107AQ8IZN7 70 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 ARHGAP24Q8N264 748 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 TDRD5Q8NAT2 981 aaKnown RBP8.85□□□□□ -0.99
UBE3B-208ENST00000538070 PPFIBP2Q8ND30 876 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 BLOC1S5Q8TDH9 187 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 KCTD13Q8WZ19 329 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 USP13Q92995 863 aaPredicted RBP8.85□□□□□ -0.99
UBE3B-208ENST00000538070 TEKT5Q96M29 485 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 CATSPER2Q96P56 530 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 TBL1YQ9BQ87 522 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 SENP6Q9GZR1 1112 aaPredicted RBP8.85□□□□□ -0.99
UBE3B-208ENST00000538070 GBA3Q9H227 469 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 SUDS3Q9H7L9 328 aaPredicted RBP8.85□□□□□ -0.99
UBE3B-208ENST00000538070 COG4Q9H9E3 785 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 GMIPQ9P107 970 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 TAGLN3Q9UI15 199 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 GIT1Q9Y2X7 761 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 ACTL7AQ9Y615 435 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 PLXNB2O15031 1838 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 SIP14410 1827 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 PLXNA1Q9UIW2 1896 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 SLC12A8A0AV02 714 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 DDHD2O94830 711 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 PIGNO95427 931 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 IRF1P10914 325 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 NME5P56597 212 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 PPIDQ08752 370 aaKnown RBP8.85□□□□□ -0.99
UBE3B-208ENST00000538070 NIPAL4Q0D2K0 466 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 ITGA7Q13683 1181 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 CTXN3Q4LDR2 81 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 SLC9B1Q4ZJI4 515 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 GRTP1Q5TC63 336 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 NXNL1Q96CM4 212 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 PTCD3Q96EY7 689 aaKnown RBP8.85□□□□□ -0.99
UBE3B-208ENST00000538070 NAF1Q96HR8 494 aaKnown RBP8.85□□□□□ -0.99
UBE3B-208ENST00000538070 RBBP8Q99708 897 aa8.85□□□□□ -0.99
UBE3B-208ENST00000538070 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms