RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 SGCGQ13326 291 aa13.55□□□□□ -0.24
CLSTN3-205ENST00000535452 KIAA1161Q6NSJ0 714 aa13.55□□□□□ -0.24
CLSTN3-205ENST00000535452 RWDD4Q6NW29 188 aaKnown RBP13.55□□□□□ -0.24
CLSTN3-205ENST00000535452 ERN2Q76MJ5 926 aaKnown RBP13.55□□□□□ -0.24
CLSTN3-205ENST00000535452 DCP2Q8IU60 420 aaKnown RBP13.55□□□□□ -0.24
CLSTN3-205ENST00000535452 FAM71AQ8IYT1 594 aa13.55□□□□□ -0.24
CLSTN3-205ENST00000535452 WDTC1Q8N5D0 677 aa13.55□□□□□ -0.24
CLSTN3-205ENST00000535452 PCDH20Q8N6Y1 951 aaKnown RBP13.55□□□□□ -0.24
CLSTN3-205ENST00000535452 PGAP3Q96FM1 320 aaPredicted RBP13.55□□□□□ -0.24
CLSTN3-205ENST00000535452 FEM1CQ96JP0 617 aa13.55□□□□□ -0.24
CLSTN3-205ENST00000535452 HAPLN3Q96S86 360 aa13.55□□□□□ -0.24
CLSTN3-205ENST00000535452 NPY6RQ99463 290 aa13.55□□□□□ -0.24
CLSTN3-205ENST00000535452 DUSP23Q9BVJ7 150 aa13.55□□□□□ -0.24
CLSTN3-205ENST00000535452 CEP44Q9C0F1 390 aa13.55□□□□□ -0.24
CLSTN3-205ENST00000535452 CLSTN2Q9H4D0 955 aa13.55□□□□□ -0.24
CLSTN3-205ENST00000535452 RETREG1Q9H6L5 497 aa13.55□□□□□ -0.24
CLSTN3-205ENST00000535452 TOR4AQ9NXH8 423 aa13.55□□□□□ -0.24
CLSTN3-205ENST00000535452 NCKIPSDQ9NZQ3 722 aa13.55□□□□□ -0.24
CLSTN3-205ENST00000535452 VPS51Q9UID3 782 aa13.55□□□□□ -0.24
CLSTN3-205ENST00000535452 DAAM1Q9Y4D1 1078 aa13.55□□□□□ -0.24
CLSTN3-205ENST00000535452 A0A1W2PR77 199 aa13.54□□□□□ -0.24
CLSTN3-205ENST00000535452 GOLGA6L22H0YM25 854 aa13.54□□□□□ -0.24
CLSTN3-205ENST00000535452 WNT1P04628 370 aa13.54□□□□□ -0.24
CLSTN3-205ENST00000535452 CCDC172P0C7W6 258 aa13.54□□□□□ -0.24
CLSTN3-205ENST00000535452 DRD3P35462 400 aa13.54□□□□□ -0.24
CLSTN3-205ENST00000535452 CLCN1P35523 988 aa13.54□□□□□ -0.24
CLSTN3-205ENST00000535452 RPS21P63220 83 aaKnown RBP13.54□□□□□ -0.24
CLSTN3-205ENST00000535452 MAPK8IP2Q13387 824 aaPredicted RBP13.54□□□□□ -0.24
CLSTN3-205ENST00000535452 EIF4EBP2Q13542 120 aaPredicted RBP13.54□□□□□ -0.24
CLSTN3-205ENST00000535452 COL28A1Q2UY09 1125 aa13.54□□□□□ -0.24
CLSTN3-205ENST00000535452 HSP90AA4PQ58FG1 418 aa13.54□□□□□ -0.24
CLSTN3-205ENST00000535452 KCNT1Q5JUK3 1230 aa13.54□□□□□ -0.24
CLSTN3-205ENST00000535452 HES3Q5TGS1 186 aa13.54□□□□□ -0.24
CLSTN3-205ENST00000535452 AGBL4Q5VU57 503 aa13.54□□□□□ -0.24
CLSTN3-205ENST00000535452 C22orf39Q6P5X5 142 aa13.54□□□□□ -0.24
CLSTN3-205ENST00000535452 TRIM72Q6ZMU5 477 aa13.54□□□□□ -0.24
CLSTN3-205ENST00000535452 PTAR1Q7Z6K3 402 aaPredicted RBP13.54□□□□□ -0.24
CLSTN3-205ENST00000535452 PDZD3Q86UT5 571 aa13.54□□□□□ -0.24
CLSTN3-205ENST00000535452 HORMAD1Q86X24 394 aa13.54□□□□□ -0.24
CLSTN3-205ENST00000535452 PAF1Q8N7H5 531 aa13.54□□□□□ -0.24
CLSTN3-205ENST00000535452 TBCBQ99426 244 aa13.54□□□□□ -0.24
CLSTN3-205ENST00000535452 MYOCQ99972 504 aa13.54□□□□□ -0.24
CLSTN3-205ENST00000535452 ORAI3Q9BRQ5 295 aa13.54□□□□□ -0.24
CLSTN3-205ENST00000535452 C1QTNF7Q9BXJ2 289 aa13.54□□□□□ -0.24
CLSTN3-205ENST00000535452 STK33Q9BYT3 514 aa13.54□□□□□ -0.24
CLSTN3-205ENST00000535452 SEPT11Q9NVA2 429 aaKnown RBP13.54□□□□□ -0.24
CLSTN3-205ENST00000535452 DONSONQ9NYP3 566 aa13.54□□□□□ -0.24
CLSTN3-205ENST00000535452 CLCA2Q9UQC9 943 aa13.54□□□□□ -0.24
CLSTN3-205ENST00000535452 GPSM3Q9Y4H4 160 aa13.54□□□□□ -0.24
CLSTN3-205ENST00000535452 A6NNZ2 444 aa13.53□□□□□ -0.24
CLSTN3-205ENST00000535452 PLK4O00444 970 aa13.53□□□□□ -0.24
CLSTN3-205ENST00000535452 RIOK3O14730 519 aaKnown RBP13.53□□□□□ -0.24
CLSTN3-205ENST00000535452 FPGTO14772 594 aa13.53□□□□□ -0.24
CLSTN3-205ENST00000535452 DKK1O94907 266 aa13.53□□□□□ -0.24
CLSTN3-205ENST00000535452 ENDOD1O94919 500 aa13.53□□□□□ -0.24
CLSTN3-205ENST00000535452 UCHL3P15374 230 aa13.53□□□□□ -0.24
CLSTN3-205ENST00000535452 XPAP23025 273 aaPredicted RBP13.53□□□□□ -0.24
CLSTN3-205ENST00000535452 RRM1P23921 792 aa13.53□□□□□ -0.24
CLSTN3-205ENST00000535452 ACTN2P35609 894 aa13.53□□□□□ -0.24
CLSTN3-205ENST00000535452 NSFP46459 744 aaKnown RBP13.53□□□□□ -0.24
CLSTN3-205ENST00000535452 HNRNPKP61978 463 aaKnown RBP eCLIP13.53□□□□□ -0.24
CLSTN3-205ENST00000535452 SNRPD1P62314 119 aaKnown RBP13.53□□□□□ -0.24
CLSTN3-205ENST00000535452 ATP11AP98196 1134 aa13.53□□□□□ -0.24
CLSTN3-205ENST00000535452 SEMG2Q02383 582 aa13.53□□□□□ -0.24
CLSTN3-205ENST00000535452 APBA1Q02410 837 aa13.53□□□□□ -0.24
CLSTN3-205ENST00000535452 DNAJC3Q13217 504 aa13.53□□□□□ -0.24
CLSTN3-205ENST00000535452 ACAP1Q15027 740 aa13.53□□□□□ -0.24
CLSTN3-205ENST00000535452 CDO1Q16878 200 aa13.53□□□□□ -0.24
CLSTN3-205ENST00000535452 C5orf22Q49AR2 442 aa13.53□□□□□ -0.24
CLSTN3-205ENST00000535452 ARSIQ5FYB1 569 aa13.53□□□□□ -0.24
CLSTN3-205ENST00000535452 CFAP58Q5T655 872 aa13.53□□□□□ -0.24
CLSTN3-205ENST00000535452 KLHDC7AQ5VTJ3 777 aa13.53□□□□□ -0.24
CLSTN3-205ENST00000535452 NAA35Q5VZE5 725 aa13.53□□□□□ -0.24
CLSTN3-205ENST00000535452 DRC7Q8IY82 874 aa13.53□□□□□ -0.24
CLSTN3-205ENST00000535452 GLMNQ92990 594 aa13.53□□□□□ -0.24
CLSTN3-205ENST00000535452 LRIG1Q96JA1 1093 aa13.53□□□□□ -0.24
CLSTN3-205ENST00000535452 HEPHQ9BQS7 1158 aa13.53□□□□□ -0.24
CLSTN3-205ENST00000535452 HDAC8Q9BY41 377 aa13.53□□□□□ -0.24
CLSTN3-205ENST00000535452 KLHL11Q9NVR0 708 aa13.53□□□□□ -0.24
CLSTN3-205ENST00000535452 MPP6Q9NZW5 540 aa13.53□□□□□ -0.24
CLSTN3-205ENST00000535452 SARDHQ9UL12 918 aa13.53□□□□□ -0.24
CLSTN3-205ENST00000535452 FHOD1Q9Y613 1164 aa13.53□□□□□ -0.24
CLSTN3-205ENST00000535452 FAM208BQ5VWN6 2430 aa13.52□□□□□ -0.24
CLSTN3-205ENST00000535452 DRGXA6NNA5 263 aa13.52□□□□□ -0.25
CLSTN3-205ENST00000535452 SNAP91O60641 907 aa13.52□□□□□ -0.25
CLSTN3-205ENST00000535452 SDC3O75056 442 aa13.52□□□□□ -0.25
CLSTN3-205ENST00000535452 CNTN5O94779 1100 aa13.52□□□□□ -0.25
CLSTN3-205ENST00000535452 PNMA6AP0CW24 399 aaPredicted RBP13.52□□□□□ -0.25
CLSTN3-205ENST00000535452 PRLRP16471 622 aa13.52□□□□□ -0.25
CLSTN3-205ENST00000535452 GLDCP23378 1020 aa13.52□□□□□ -0.25
CLSTN3-205ENST00000535452 CDH5P33151 784 aaPredicted RBP13.52□□□□□ -0.25
CLSTN3-205ENST00000535452 ANP32AP39687 249 aaKnown RBP13.52□□□□□ -0.25
CLSTN3-205ENST00000535452 STAT1P42224 750 aa13.52□□□□□ -0.25
CLSTN3-205ENST00000535452 GABRB2P47870 512 aa13.52□□□□□ -0.25
CLSTN3-205ENST00000535452 ACADVLP49748 655 aa13.52□□□□□ -0.25
CLSTN3-205ENST00000535452 SERPINH1P50454 418 aaKnown RBP13.52□□□□□ -0.25
CLSTN3-205ENST00000535452 GNA12Q03113 381 aa13.52□□□□□ -0.25
CLSTN3-205ENST00000535452 KCNMA1Q12791 1236 aa13.52□□□□□ -0.25
CLSTN3-205ENST00000535452 BNIP3Q12983 259 aa13.52□□□□□ -0.25
CLSTN3-205ENST00000535452 ZNF211Q13398 564 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms