RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 YIPF1Q9Y548 306 aa13.64□□□□□ -0.23
BEST1-208ENST00000534553 ACSL4O60488 711 aa13.64□□□□□ -0.23
BEST1-208ENST00000534553 PIAS1O75925 651 aa13.64□□□□□ -0.23
BEST1-208ENST00000534553 LATS1O95835 1130 aa13.64□□□□□ -0.23
BEST1-208ENST00000534553 RAG1P15918 1043 aa13.64□□□□□ -0.23
BEST1-208ENST00000534553 HMGA1P17096 107 aaKnown RBP13.64□□□□□ -0.23
BEST1-208ENST00000534553 HADHAP40939 763 aa13.64□□□□□ -0.23
BEST1-208ENST00000534553 IFT88Q13099 833 aa13.64□□□□□ -0.23
BEST1-208ENST00000534553 POLD3Q15054 466 aaPredicted RBP13.64□□□□□ -0.23
BEST1-208ENST00000534553 SLC1A5Q15758 541 aa13.64□□□□□ -0.23
BEST1-208ENST00000534553 ANKRD20A4Q4UJ75 823 aa13.64□□□□□ -0.23
BEST1-208ENST00000534553 PACS1Q6VY07 963 aa13.64□□□□□ -0.23
BEST1-208ENST00000534553 ARHGAP36Q6ZRI8 547 aa13.64□□□□□ -0.23
BEST1-208ENST00000534553 SPATA21Q7Z572 469 aa13.64□□□□□ -0.23
BEST1-208ENST00000534553 ITIH5Q86UX2 942 aa13.64□□□□□ -0.23
BEST1-208ENST00000534553 RASSF3Q86WH2 238 aa13.64□□□□□ -0.23
BEST1-208ENST00000534553 TCEAL8Q8IYN2 117 aa13.64□□□□□ -0.23
BEST1-208ENST00000534553 BBS5Q8N3I7 341 aa13.64□□□□□ -0.23
BEST1-208ENST00000534553 TEX26Q8N6G2 289 aa13.64□□□□□ -0.23
BEST1-208ENST00000534553 GBP7Q8N8V2 638 aaPredicted RBP13.64□□□□□ -0.23
BEST1-208ENST00000534553 GABPB2Q8TAK5 448 aaPredicted RBP13.64□□□□□ -0.23
BEST1-208ENST00000534553 ZNF669Q96BR6 464 aaPredicted RBP13.64□□□□□ -0.23
BEST1-208ENST00000534553 ELAC2Q9BQ52 826 aaKnown RBP13.64□□□□□ -0.23
BEST1-208ENST00000534553 PRKD2Q9BZL6 878 aa13.64□□□□□ -0.23
BEST1-208ENST00000534553 NOL6Q9H6R4 1146 aaKnown RBP13.64□□□□□ -0.23
BEST1-208ENST00000534553 MRPL17Q9NRX2 175 aaKnown RBP13.64□□□□□ -0.23
BEST1-208ENST00000534553 ZNF212Q9UDV6 495 aa13.64□□□□□ -0.23
BEST1-208ENST00000534553 C2CD2LO14523 706 aa13.63□□□□□ -0.23
BEST1-208ENST00000534553 RFPL1O75677 317 aa13.63□□□□□ -0.23
BEST1-208ENST00000534553 HLA-DQB2P05538 268 aa13.63□□□□□ -0.23
BEST1-208ENST00000534553 RPL17P18621 184 aaKnown RBP13.63□□□□□ -0.23
BEST1-208ENST00000534553 OR1E1P30953 314 aa13.63□□□□□ -0.23
BEST1-208ENST00000534553 CRHR1P34998 444 aa13.63□□□□□ -0.23
BEST1-208ENST00000534553 SPRP35270 261 aaPredicted RBP13.63□□□□□ -0.23
BEST1-208ENST00000534553 ETV4P43268 484 aa13.63□□□□□ -0.23
BEST1-208ENST00000534553 CSE1LP55060 971 aaKnown RBP13.63□□□□□ -0.23
BEST1-208ENST00000534553 CORO7P57737 925 aa13.63□□□□□ -0.23
BEST1-208ENST00000534553 CRADDP78560 199 aa13.63□□□□□ -0.23
BEST1-208ENST00000534553 LRRC26Q2I0M4 334 aa13.63□□□□□ -0.23
BEST1-208ENST00000534553 PABPC1LQ4VXU2 614 aaKnown RBP13.63□□□□□ -0.23
BEST1-208ENST00000534553 ALFQ53S48 1182 aa13.63□□□□□ -0.23
BEST1-208ENST00000534553 FAM182AQ5T1J6 154 aa13.63□□□□□ -0.23
BEST1-208ENST00000534553 PDPK2PQ6A1A2 396 aa13.63□□□□□ -0.23
BEST1-208ENST00000534553 TFAP2DQ7Z6R9 452 aa13.63□□□□□ -0.23
BEST1-208ENST00000534553 PPHLN1Q8NEY8 458 aaKnown RBP13.63□□□□□ -0.23
BEST1-208ENST00000534553 RAB3IL1Q8TBN0 382 aa13.63□□□□□ -0.23
BEST1-208ENST00000534553 USP33Q8TEY7 942 aa13.63□□□□□ -0.23
BEST1-208ENST00000534553 HMCESQ96FZ2 354 aa13.63□□□□□ -0.23
BEST1-208ENST00000534553 PAWRQ96IZ0 340 aaKnown RBP13.63□□□□□ -0.23
BEST1-208ENST00000534553 SRPK1Q96SB4 655 aaKnown RBP13.63□□□□□ -0.23
BEST1-208ENST00000534553 YME1L1Q96TA2 773 aa13.63□□□□□ -0.23
BEST1-208ENST00000534553 MAGEH1Q9H213 219 aa13.63□□□□□ -0.23
BEST1-208ENST00000534553 KDM4CQ9H3R0 1056 aa13.63□□□□□ -0.23
BEST1-208ENST00000534553 ACTR5Q9H9F9 607 aaPredicted RBP13.63□□□□□ -0.23
BEST1-208ENST00000534553 ARNT2Q9HBZ2 717 aa13.63□□□□□ -0.23
BEST1-208ENST00000534553 ARL2BPQ9Y2Y0 163 aa13.63□□□□□ -0.23
BEST1-208ENST00000534553 PCDHB12Q9Y5F1 795 aa13.63□□□□□ -0.23
BEST1-208ENST00000534553 MRPL42Q9Y6G3 142 aaKnown RBP13.63□□□□□ -0.23
BEST1-208ENST00000534553 MYO18AQ92614 2054 aaKnown RBP13.63□□□□□ -0.23
BEST1-208ENST00000534553 ZCWPW2A0A1B0GU75 182 aa13.62□□□□□ -0.23
BEST1-208ENST00000534553 GOLGA8RI6L899 631 aa13.62□□□□□ -0.23
BEST1-208ENST00000534553 PRRG1O14668 218 aa13.62□□□□□ -0.23
BEST1-208ENST00000534553 KLF11O14901 512 aa13.62□□□□□ -0.23
BEST1-208ENST00000534553 TIMM44O43615 452 aa13.62□□□□□ -0.23
BEST1-208ENST00000534553 USP12O75317 370 aa13.62□□□□□ -0.23
BEST1-208ENST00000534553 SEC24AO95486 1093 aa13.62□□□□□ -0.23
BEST1-208ENST00000534553 PEX11BO96011 259 aa13.62□□□□□ -0.23
BEST1-208ENST00000534553 IL1BP01584 269 aa13.62□□□□□ -0.23
BEST1-208ENST00000534553 HMBSP08397 361 aa13.62□□□□□ -0.23
BEST1-208ENST00000534553 CSF2RAP15509 400 aa13.62□□□□□ -0.23
BEST1-208ENST00000534553 PAMP19021 973 aa13.62□□□□□ -0.23
BEST1-208ENST00000534553 ADRA1DP25100 572 aa13.62□□□□□ -0.23
BEST1-208ENST00000534553 FOXN2P32314 431 aa13.62□□□□□ -0.23
BEST1-208ENST00000534553 ADRA1AP35348 466 aa13.62□□□□□ -0.23
BEST1-208ENST00000534553 EPHB3P54753 998 aa13.62□□□□□ -0.23
BEST1-208ENST00000534553 CDH4P55283 916 aa13.62□□□□□ -0.23
BEST1-208ENST00000534553 ILF2Q12905 390 aaKnown RBP13.62□□□□□ -0.23
BEST1-208ENST00000534553 SERINC3Q13530 473 aa13.62□□□□□ -0.23
BEST1-208ENST00000534553 UGP2Q16851 508 aa13.62□□□□□ -0.23
BEST1-208ENST00000534553 INSCQ1MX18 579 aa13.62□□□□□ -0.23
BEST1-208ENST00000534553 TMCO4Q5TGY1 634 aa13.62□□□□□ -0.23
BEST1-208ENST00000534553 FYB2Q5VWT5 728 aa13.62□□□□□ -0.23
BEST1-208ENST00000534553 KYAT3Q6YP21 454 aaKnown RBP13.62□□□□□ -0.23
BEST1-208ENST00000534553 OTOP3Q7RTS5 596 aa13.62□□□□□ -0.23
BEST1-208ENST00000534553 IGSF8Q969P0 613 aa13.62□□□□□ -0.23
BEST1-208ENST00000534553 IMP4Q96G21 291 aaKnown RBP13.62□□□□□ -0.23
BEST1-208ENST00000534553 KLHL14Q9P2G3 628 aa13.62□□□□□ -0.23
BEST1-208ENST00000534553 GRID1Q9ULK0 1009 aa13.62□□□□□ -0.23
BEST1-208ENST00000534553 PLLPQ9Y342 182 aa13.62□□□□□ -0.23
BEST1-208ENST00000534553 ASB3Q9Y575 518 aa13.62□□□□□ -0.23
BEST1-208ENST00000534553 ATP9BO43861 1147 aa13.62□□□□□ -0.23
BEST1-208ENST00000534553 EDF1O60869 148 aaKnown RBP13.62□□□□□ -0.23
BEST1-208ENST00000534553 GLRA3O75311 464 aa13.62□□□□□ -0.23
BEST1-208ENST00000534553 CLDN11O75508 207 aa13.62□□□□□ -0.23
BEST1-208ENST00000534553 CNTN5O94779 1100 aa13.62□□□□□ -0.23
BEST1-208ENST00000534553 ITGA2BP08514 1039 aa13.62□□□□□ -0.23
BEST1-208ENST00000534553 ETFBP38117 255 aa13.62□□□□□ -0.23
BEST1-208ENST00000534553 DEFB103AP81534 67 aa13.62□□□□□ -0.23
BEST1-208ENST00000534553 LAMB3Q13751 1172 aa13.62□□□□□ -0.23
BEST1-208ENST00000534553 SLC14A2Q15849 920 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms