RNA–Protein interactions for RNA: ENST00000531504.5

HIPK3-205, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 2

Gene HIPK3, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-205ENST00000531504 KLK6Q92876 244 aa20.35■□□□□ 0.85
HIPK3-205ENST00000531504 FAM149B1Q96BN6 582 aa20.35■□□□□ 0.85
HIPK3-205ENST00000531504 CCDC114Q96M63 670 aa20.35■□□□□ 0.85
HIPK3-205ENST00000531504 MIS12Q9H081 205 aa20.35■□□□□ 0.85
HIPK3-205ENST00000531504 FZD3Q9NPG1 666 aa20.35■□□□□ 0.85
HIPK3-205ENST00000531504 DYRK4Q9NR20 520 aa20.35■□□□□ 0.85
HIPK3-205ENST00000531504 USP25Q9UHP3 1055 aa20.35■□□□□ 0.85
HIPK3-205ENST00000531504 TCAF2A6NFQ2 919 aa20.34■□□□□ 0.85
HIPK3-205ENST00000531504 GABBR2O75899 941 aa20.34■□□□□ 0.85
HIPK3-205ENST00000531504 TNFSF15O95150 251 aa20.34■□□□□ 0.85
HIPK3-205ENST00000531504 ITGA2BP08514 1039 aa20.34■□□□□ 0.85
HIPK3-205ENST00000531504 PAEPP09466 180 aa20.34■□□□□ 0.85
HIPK3-205ENST00000531504 SFTPCP11686 197 aa20.34■□□□□ 0.85
HIPK3-205ENST00000531504 NDUFA8P51970 172 aa20.34■□□□□ 0.85
HIPK3-205ENST00000531504 DLG2Q15700 870 aa20.34■□□□□ 0.85
HIPK3-205ENST00000531504 SKOR2Q2VWA4 1001 aaPredicted RBP20.34■□□□□ 0.85
HIPK3-205ENST00000531504 RABGAP1LQ5R372 815 aa20.34■□□□□ 0.85
HIPK3-205ENST00000531504 GCNT7Q6ZNI0 430 aa20.34■□□□□ 0.85
HIPK3-205ENST00000531504 PTAR1Q7Z6K3 402 aaPredicted RBP20.34■□□□□ 0.85
HIPK3-205ENST00000531504 TAC4Q86UU9 113 aa20.34■□□□□ 0.85
HIPK3-205ENST00000531504 GUF1Q8N442 669 aaKnown RBP20.34■□□□□ 0.85
HIPK3-205ENST00000531504 ZNF548Q8NEK5 533 aaPredicted RBP20.34■□□□□ 0.85
HIPK3-205ENST00000531504 GPT2Q8TD30 523 aa20.34■□□□□ 0.85
HIPK3-205ENST00000531504 PRR11Q96HE9 360 aaPredicted RBP20.34■□□□□ 0.85
HIPK3-205ENST00000531504 WDR70Q9NW82 654 aa20.34■□□□□ 0.85
HIPK3-205ENST00000531504 XPO7Q9UIA9 1087 aaKnown RBP20.34■□□□□ 0.85
HIPK3-205ENST00000531504 MAPK8IP1Q9UQF2 711 aa20.34■□□□□ 0.85
HIPK3-205ENST00000531504 CSNK1G3Q9Y6M4 447 aa20.34■□□□□ 0.85
HIPK3-205ENST00000531504 RHOBTB3O94955 611 aa20.33■□□□□ 0.85
HIPK3-205ENST00000531504 GJB6O95452 261 aa20.33■□□□□ 0.85
HIPK3-205ENST00000531504 FYNP06241 537 aa20.33■□□□□ 0.85
HIPK3-205ENST00000531504 SYKP43405 635 aa20.33■□□□□ 0.85
HIPK3-205ENST00000531504 INHBCP55103 352 aa20.33■□□□□ 0.85
HIPK3-205ENST00000531504 CNGA2Q16280 664 aa20.33■□□□□ 0.85
HIPK3-205ENST00000531504 EDRF1Q3B7T1 1238 aa20.33■□□□□ 0.85
HIPK3-205ENST00000531504 ZNF542PQ5EBM4 170 aa20.33■□□□□ 0.85
HIPK3-205ENST00000531504 TCERG1LQ5VWI1 586 aa20.33■□□□□ 0.85
HIPK3-205ENST00000531504 GUSBP11Q6P575 273 aa20.33■□□□□ 0.85
HIPK3-205ENST00000531504 Q6ZSR6 202 aa20.33■□□□□ 0.85
HIPK3-205ENST00000531504 USP53Q70EK8 1073 aa20.33■□□□□ 0.85
HIPK3-205ENST00000531504 ATP6V0D2Q8N8Y2 350 aa20.33■□□□□ 0.85
HIPK3-205ENST00000531504 ARRDC3Q96B67 414 aa20.33■□□□□ 0.85
HIPK3-205ENST00000531504 NOX5Q96PH1 765 aa20.33■□□□□ 0.85
HIPK3-205ENST00000531504 SRRTQ9BXP5 876 aaKnown RBP20.33■□□□□ 0.85
HIPK3-205ENST00000531504 STARD5Q9NSY2 213 aa20.33■□□□□ 0.85
HIPK3-205ENST00000531504 SLC12A6Q9UHW9 1150 aa20.33■□□□□ 0.85
HIPK3-205ENST00000531504 NAALADL1Q9UQQ1 740 aa20.33■□□□□ 0.85
HIPK3-205ENST00000531504 COQ4Q9Y3A0 265 aa20.33■□□□□ 0.85
HIPK3-205ENST00000531504 BOD1L1Q8NFC6 3051 aa20.33■□□□□ 0.84
HIPK3-205ENST00000531504 KIF26BQ2KJY2 2108 aa20.33■□□□□ 0.84
HIPK3-205ENST00000531504 CCDC187A0A096LP49 1063 aa20.32■□□□□ 0.84
HIPK3-205ENST00000531504 EME2A4GXA9 379 aaPredicted RBP20.32■□□□□ 0.84
HIPK3-205ENST00000531504 KPNA3O00505 521 aaPredicted RBP20.32■□□□□ 0.84
HIPK3-205ENST00000531504 BNIP3LO60238 219 aa20.32■□□□□ 0.84
HIPK3-205ENST00000531504 PCDH8O95206 1070 aa20.32■□□□□ 0.84
HIPK3-205ENST00000531504 ITGB2P05107 769 aa20.32■□□□□ 0.84
HIPK3-205ENST00000531504 NME1P15531 152 aaKnown RBP20.32■□□□□ 0.84
HIPK3-205ENST00000531504 CLDN2P57739 230 aa20.32■□□□□ 0.84
HIPK3-205ENST00000531504 NR0B2Q15466 257 aa20.32■□□□□ 0.84
HIPK3-205ENST00000531504 ZC3H12AQ5D1E8 599 aaKnown RBP20.32■□□□□ 0.84
HIPK3-205ENST00000531504 TMEM270Q6UE05 265 aa20.32■□□□□ 0.84
HIPK3-205ENST00000531504 BEND5Q7L4P6 421 aa20.32■□□□□ 0.84
HIPK3-205ENST00000531504 PARGQ86W56 976 aa20.32■□□□□ 0.84
HIPK3-205ENST00000531504 FMR1NBQ8N0W7 255 aaPredicted RBP20.32■□□□□ 0.84
HIPK3-205ENST00000531504 TFAP2BQ92481 460 aa20.32■□□□□ 0.84
HIPK3-205ENST00000531504 SALL4Q9UJQ4 1053 aa20.32■□□□□ 0.84
HIPK3-205ENST00000531504 HS3ST3A1Q9Y663 406 aa20.32■□□□□ 0.84
HIPK3-205ENST00000531504 DOPEY2Q9Y3R5 2298 aa20.32■□□□□ 0.84
HIPK3-205ENST00000531504 CSF2P04141 144 aa20.31■□□□□ 0.84
HIPK3-205ENST00000531504 RPIAP49247 311 aa20.31■□□□□ 0.84
HIPK3-205ENST00000531504 CBWD6Q4V339 395 aa20.31■□□□□ 0.84
HIPK3-205ENST00000531504 ZCWPW2Q504Y3 356 aa20.31■□□□□ 0.84
HIPK3-205ENST00000531504 DCAF17Q5H9S7 520 aaPredicted RBP20.31■□□□□ 0.84
HIPK3-205ENST00000531504 CBWD3Q5JTY5 395 aa20.31■□□□□ 0.84
HIPK3-205ENST00000531504 CBWD5Q5RIA9 395 aa20.31■□□□□ 0.84
HIPK3-205ENST00000531504 OR6B2Q6IFH4 312 aa20.31■□□□□ 0.84
HIPK3-205ENST00000531504 CXorf57Q6NSI4 855 aaKnown RBP20.31■□□□□ 0.84
HIPK3-205ENST00000531504 KYAT3Q6YP21 454 aaKnown RBP20.31■□□□□ 0.84
HIPK3-205ENST00000531504 CIR1Q86X95 450 aaPredicted RBP20.31■□□□□ 0.84
HIPK3-205ENST00000531504 SH2D3CQ8N5H7 860 aa20.31■□□□□ 0.84
HIPK3-205ENST00000531504 UBR7Q8N806 425 aa20.31■□□□□ 0.84
HIPK3-205ENST00000531504 GLMNQ92990 594 aa20.31■□□□□ 0.84
HIPK3-205ENST00000531504 NAT6Q93015 286 aa20.31■□□□□ 0.84
HIPK3-205ENST00000531504 SGF29Q96ES7 293 aa20.31■□□□□ 0.84
HIPK3-205ENST00000531504 IL12RB2Q99665 862 aa20.31■□□□□ 0.84
HIPK3-205ENST00000531504 GPR27Q9NS67 375 aa20.31■□□□□ 0.84
HIPK3-205ENST00000531504 VPS28Q9UK41 221 aa20.31■□□□□ 0.84
HIPK3-205ENST00000531504 COL12A1Q99715 3063 aa20.31■□□□□ 0.84
HIPK3-205ENST00000531504 TLN1Q9Y490 2541 aaKnown RBP20.3■□□□□ 0.84
HIPK3-205ENST00000531504 KCNU1A8MYU2 1149 aa20.3■□□□□ 0.84
HIPK3-205ENST00000531504 CETN3O15182 167 aa20.3■□□□□ 0.84
HIPK3-205ENST00000531504 AQP9O43315 295 aa20.3■□□□□ 0.84
HIPK3-205ENST00000531504 ZNF202O95125 648 aa20.3■□□□□ 0.84
HIPK3-205ENST00000531504 FZD2Q14332 565 aa20.3■□□□□ 0.84
HIPK3-205ENST00000531504 KLHL40Q2TBA0 621 aa20.3■□□□□ 0.84
HIPK3-205ENST00000531504 LINC00303Q3SY05 128 aa20.3■□□□□ 0.84
HIPK3-205ENST00000531504 TMIEQ8NEW7 156 aa20.3■□□□□ 0.84
HIPK3-205ENST00000531504 FEM1AQ9BSK4 669 aa20.3■□□□□ 0.84
HIPK3-205ENST00000531504 CAAP1Q9H8G2 361 aa20.3■□□□□ 0.84
HIPK3-205ENST00000531504 ST7Q9NRC1 585 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms