RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 CCNB1P14635 433 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 RPS2P15880 293 aaKnown RBP3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 ZNF3P17036 446 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 ATF6P18850 670 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 SLC9A1P19634 815 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 PDCP20941 246 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 CDH3P22223 829 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 GTF2H1P32780 548 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 HOXD13P35453 343 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 KRT20P35900 424 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 SLC26A3P40879 764 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 PLCD1P51178 756 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 CCR3P51677 355 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 STAT2P52630 851 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 ATP6V0D1P61421 351 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 POLR2GP62487 172 aaKnown RBP eCLIP3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 KCNJ2P63252 427 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 TMPRSS15P98073 1019 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 SRSF4Q08170 494 aaKnown RBP3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 AP1B1Q10567 949 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 CUL1Q13616 776 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 RAPGEF1Q13905 1077 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 LPIN1Q14693 890 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 TGFBIQ15582 683 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 HSP90AA5PQ58FG0 334 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 PPP6R3Q5H9R7 873 aaPredicted RBP3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 SHEQ5VZ18 495 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 ANO1Q5XXA6 986 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 HAUS3Q68CZ6 603 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 ANKS6Q68DC2 871 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 ZNF425Q6IV72 752 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 TATDN1Q6P1N9 297 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 RANBP10Q6VN20 620 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 IDO2Q6ZQW0 420 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 CYP4V2Q6ZWL3 525 aaPredicted RBP3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 TRAPPC11Q7Z392 1133 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 ATG9AQ7Z3C6 839 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 ZNF572Q7Z3I7 529 aaPredicted RBP3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 NET1Q7Z628 596 aaPredicted RBP3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 ADAMTSL2Q86TH1 951 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 HEATR4Q86WZ0 1026 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 TMEM57Q8N5G2 664 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 CDYL2Q8N8U2 506 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 C7orf57Q8NEG2 295 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 TTLQ8NG68 377 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 OR10Z1Q8NGY1 313 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 PIGOQ8TEQ8 1089 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 AFG1LQ8WV93 481 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 RASSF5Q8WWW0 418 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 PRCCQ92733 491 aaPredicted RBP3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 FUBP1Q96AE4 644 aaKnown RBP3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 KLHL29Q96CT2 875 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 CHMP6Q96FZ7 201 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 ZNF274Q96GC6 653 aaPredicted RBP3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 REXO5Q96IC2 774 aaKnown RBP3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 CCDC138Q96M89 665 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 Q96MF0 132 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 AIFM3Q96NN9 605 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 ACAP3Q96P50 834 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 ZIM3Q96PE6 472 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 TMEM237Q96Q45 408 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 CDRT15Q96T59 188 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 NEU1Q99519 415 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 OLFM1Q99784 485 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 TUBA1CQ9BQE3 449 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 CCDC77Q9BR77 488 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 FDXACB1Q9BRP7 624 aaPredicted RBP3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 MXD3Q9BW11 206 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 APOL5Q9BWW9 433 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 CALN1Q9BXU9 219 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 STK33Q9BYT3 514 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 EHD1Q9H4M9 534 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 DCLRE1BQ9H816 532 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 ECT2Q9H8V3 914 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 CNOT10Q9H9A5 744 aaKnown RBP3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 TMBIM4Q9HC24 238 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 SELENONQ9NZV5 590 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 FNIP2Q9P278 1114 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 KIF17Q9P2E2 1029 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 THEGQ9P2T0 379 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 EPS15L1Q9UBC2 864 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 SLC7A8Q9UHI5 535 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 ANAPC5Q9UJX4 755 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 GRID1Q9ULK0 1009 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 FAF1Q9UNN5 650 aaPredicted RBP3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 PA2G4Q9UQ80 394 aaKnown RBP3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 APOBEC2Q9Y235 224 aaKnown RBP3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 TMEM5Q9Y2B1 443 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 RABGAP1Q9Y3P9 1069 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 USP15Q9Y4E8 981 aaPredicted RBP3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 PASKQ96RG2 1323 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 ADGRL1O94910 1474 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 ASXL1Q8IXJ9 1541 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 ARHGEF5Q12774 1597 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 MYOM1P52179 1685 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 SHPRHQ149N8 1683 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 ADGRB2O60241 1585 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 HMGXB3Q12766 1538 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 ATP7BP35670 1465 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 ABCC10Q5T3U5 1492 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms