RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 RUFY3Q7L099 469 aa7.02□□□□□ -1.29
SDCBP-210ENST00000522843 TRMT11Q7Z4G4 463 aaKnown RBP7.02□□□□□ -1.29
SDCBP-210ENST00000522843 METTL23Q86XA0 190 aa7.02□□□□□ -1.29
SDCBP-210ENST00000522843 NT5DC4Q86YG4 428 aa7.02□□□□□ -1.29
SDCBP-210ENST00000522843 SCN4BQ8IWT1 228 aa7.02□□□□□ -1.29
SDCBP-210ENST00000522843 BBS7Q8IWZ6 715 aa7.02□□□□□ -1.29
SDCBP-210ENST00000522843 CHPFQ8IZ52 775 aa7.02□□□□□ -1.29
SDCBP-210ENST00000522843 CADM4Q8NFZ8 388 aa7.02□□□□□ -1.29
SDCBP-210ENST00000522843 SNRNP27Q8WVK2 155 aaKnown RBP7.02□□□□□ -1.29
SDCBP-210ENST00000522843 MED8Q96G25 268 aa7.02□□□□□ -1.29
SDCBP-210ENST00000522843 NAF1Q96HR8 494 aaKnown RBP7.02□□□□□ -1.29
SDCBP-210ENST00000522843 HIC2Q96JB3 615 aa7.02□□□□□ -1.29
SDCBP-210ENST00000522843 ACBD6Q9BR61 282 aa7.02□□□□□ -1.29
SDCBP-210ENST00000522843 ORAI3Q9BRQ5 295 aa7.02□□□□□ -1.29
SDCBP-210ENST00000522843 SLC12A9Q9BXP2 914 aa7.02□□□□□ -1.29
SDCBP-210ENST00000522843 TGIF2Q9GZN2 237 aa7.02□□□□□ -1.29
SDCBP-210ENST00000522843 RPF1Q9H9Y2 349 aaKnown RBP7.02□□□□□ -1.29
SDCBP-210ENST00000522843 DDX19AQ9NUU7 478 aaKnown RBP7.02□□□□□ -1.29
SDCBP-210ENST00000522843 ANKMY1Q9P2S6 941 aa7.02□□□□□ -1.29
SDCBP-210ENST00000522843 FTSJ1Q9UET6 329 aa7.02□□□□□ -1.29
SDCBP-210ENST00000522843 LRWD1Q9UFC0 647 aa7.02□□□□□ -1.29
SDCBP-210ENST00000522843 PCDHGA1Q9Y5H4 931 aa7.02□□□□□ -1.29
SDCBP-210ENST00000522843 DUSP10Q9Y6W6 482 aa7.02□□□□□ -1.29
SDCBP-210ENST00000522843 TP53BP1Q12888 1972 aaPredicted RBP7.01□□□□□ -1.29
SDCBP-210ENST00000522843 A0A0B4J269 797 aa7.01□□□□□ -1.29
SDCBP-210ENST00000522843 E2F8A0AVK6 867 aa7.01□□□□□ -1.29
SDCBP-210ENST00000522843 TISP43B9A030 160 aa7.01□□□□□ -1.29
SDCBP-210ENST00000522843 SLC9A3R1O14745 358 aaPredicted RBP7.01□□□□□ -1.29
SDCBP-210ENST00000522843 OGTO15294 1046 aa7.01□□□□□ -1.29
SDCBP-210ENST00000522843 ATP2C2O75185 946 aa7.01□□□□□ -1.29
SDCBP-210ENST00000522843 RFPL3O75679 317 aa7.01□□□□□ -1.29
SDCBP-210ENST00000522843 IGLV3-19P01714 112 aa7.01□□□□□ -1.29
SDCBP-210ENST00000522843 ITGB3P05106 788 aa7.01□□□□□ -1.29
SDCBP-210ENST00000522843 GSTM1P09488 218 aa7.01□□□□□ -1.29
SDCBP-210ENST00000522843 CISD3P0C7P0 127 aa7.01□□□□□ -1.29
SDCBP-210ENST00000522843 CCT6AP40227 531 aaKnown RBP7.01□□□□□ -1.29
SDCBP-210ENST00000522843 MAGEA11P43364 429 aa7.01□□□□□ -1.29
SDCBP-210ENST00000522843 TPMTP51580 245 aa7.01□□□□□ -1.29
SDCBP-210ENST00000522843 TSPY1Q01534 308 aa7.01□□□□□ -1.29
SDCBP-210ENST00000522843 STRN3Q13033 797 aa7.01□□□□□ -1.29
SDCBP-210ENST00000522843 TMEM132DQ14C87 1099 aa7.01□□□□□ -1.29
SDCBP-210ENST00000522843 PRAMEF14Q5SWL7 426 aa7.01□□□□□ -1.29
SDCBP-210ENST00000522843 KIAA1614Q5VZ46 1190 aa7.01□□□□□ -1.29
SDCBP-210ENST00000522843 FAM171BQ6P995 826 aa7.01□□□□□ -1.29
SDCBP-210ENST00000522843 GATAD2AQ86YP4 633 aa7.01□□□□□ -1.29
SDCBP-210ENST00000522843 HSCBQ8IWL3 235 aa7.01□□□□□ -1.29
SDCBP-210ENST00000522843 DIS3L2Q8IYB7 885 aaKnown RBP7.01□□□□□ -1.29
SDCBP-210ENST00000522843 C4orf32Q8N8J7 132 aa7.01□□□□□ -1.29
SDCBP-210ENST00000522843 EXD3Q8N9H8 876 aa7.01□□□□□ -1.29
SDCBP-210ENST00000522843 FSIP1Q8NA03 581 aa7.01□□□□□ -1.29
SDCBP-210ENST00000522843 ERMNQ8TAM6 284 aa7.01□□□□□ -1.29
SDCBP-210ENST00000522843 SPATA17Q96L03 361 aa7.01□□□□□ -1.29
SDCBP-210ENST00000522843 ZSCAN31Q96LW9 406 aaPredicted RBP7.01□□□□□ -1.29
SDCBP-210ENST00000522843 TSPAN18Q96SJ8 248 aa7.01□□□□□ -1.29
SDCBP-210ENST00000522843 TTLL2Q9BWV7 592 aa7.01□□□□□ -1.29
SDCBP-210ENST00000522843 C17orf75Q9HAS0 396 aa7.01□□□□□ -1.29
SDCBP-210ENST00000522843 TM9SF3Q9HD45 589 aa7.01□□□□□ -1.29
SDCBP-210ENST00000522843 SPHK2Q9NRA0 654 aa7.01□□□□□ -1.29
SDCBP-210ENST00000522843 TMEM30AQ9NV96 361 aa7.01□□□□□ -1.29
SDCBP-210ENST00000522843 DDX43Q9NXZ2 648 aaKnown RBP7.01□□□□□ -1.29
SDCBP-210ENST00000522843 DPP3Q9NY33 737 aa7.01□□□□□ -1.29
SDCBP-210ENST00000522843 DEC1Q9P2X7 70 aa7.01□□□□□ -1.29
SDCBP-210ENST00000522843 ANKRD6Q9Y2G4 727 aa7.01□□□□□ -1.29
SDCBP-210ENST00000522843 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.01□□□□□ -1.29
SDCBP-210ENST00000522843 DERAQ9Y315 318 aa7.01□□□□□ -1.29
SDCBP-210ENST00000522843 CYP46A1Q9Y6A2 500 aa7.01□□□□□ -1.29
SDCBP-210ENST00000522843 SPENQ96T58 3664 aaKnown RBP7□□□□□ -1.29
SDCBP-210ENST00000522843 MYH11P35749 1972 aa7□□□□□ -1.29
SDCBP-210ENST00000522843 CREBBPQ92793 2442 aa7□□□□□ -1.29
SDCBP-210ENST00000522843 UTP20O75691 2785 aaKnown RBP7□□□□□ -1.29
SDCBP-210ENST00000522843 CKAP5Q14008 2032 aa7□□□□□ -1.29
SDCBP-210ENST00000522843 NPHP3-ACAD11A0A0J9YXS1 232 aa7□□□□□ -1.29
SDCBP-210ENST00000522843 A0A1W2PQJ5 194 aa7□□□□□ -1.29
SDCBP-210ENST00000522843 PP2D1A8MPX8 630 aa7□□□□□ -1.29
SDCBP-210ENST00000522843 NOBOXO60393 691 aa7□□□□□ -1.29
SDCBP-210ENST00000522843 PIGRP01833 764 aa7□□□□□ -1.29
SDCBP-210ENST00000522843 OR52Z1P0C646 297 aa7□□□□□ -1.29
SDCBP-210ENST00000522843 PLS3P13797 630 aa7□□□□□ -1.29
SDCBP-210ENST00000522843 ACTN2P35609 894 aa7□□□□□ -1.29
SDCBP-210ENST00000522843 HNF1BP35680 557 aa7□□□□□ -1.29
SDCBP-210ENST00000522843 MATR3P43243 847 aaKnown RBP eCLIP7□□□□□ -1.29
SDCBP-210ENST00000522843 ACOT2P49753 483 aa7□□□□□ -1.29
SDCBP-210ENST00000522843 CCT8P50990 548 aa7□□□□□ -1.29
SDCBP-210ENST00000522843 PDE6CP51160 858 aa7□□□□□ -1.29
SDCBP-210ENST00000522843 COPAP53621 1224 aa7□□□□□ -1.29
SDCBP-210ENST00000522843 CACNA2D1P54289 1103 aa7□□□□□ -1.29
SDCBP-210ENST00000522843 TMPRSS3P57727 454 aa7□□□□□ -1.29
SDCBP-210ENST00000522843 ANKRD1Q15327 319 aa7□□□□□ -1.29
SDCBP-210ENST00000522843 ZNF174Q15697 407 aa7□□□□□ -1.29
SDCBP-210ENST00000522843 GRAMD4Q6IC98 578 aa7□□□□□ -1.29
SDCBP-210ENST00000522843 CPLX2Q6PUV4 134 aaKnown RBP7□□□□□ -1.29
SDCBP-210ENST00000522843 CRELD2Q6UXH1 353 aaPredicted RBP7□□□□□ -1.29
SDCBP-210ENST00000522843 JAMLQ86YT9 394 aa7□□□□□ -1.29
SDCBP-210ENST00000522843 IGSF8Q969P0 613 aa7□□□□□ -1.29
SDCBP-210ENST00000522843 FUBP3Q96I24 572 aaKnown RBP eCLIP7□□□□□ -1.29
SDCBP-210ENST00000522843 LGMNQ99538 433 aa7□□□□□ -1.29
SDCBP-210ENST00000522843 MMTAG2Q9BU76 263 aaKnown RBP7□□□□□ -1.29
SDCBP-210ENST00000522843 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7□□□□□ -1.29
SDCBP-210ENST00000522843 IKZF4Q9H2S9 585 aa7□□□□□ -1.29
SDCBP-210ENST00000522843 C6orf106Q9H6K1 298 aaPredicted RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms