RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 ALOX15BO15296 676 aa21.19■□□□□ 0.98
SDCBP-209ENST00000522243 PLRG1O43660 514 aaKnown RBP21.19■□□□□ 0.98
SDCBP-209ENST00000522243 CTSLP07711 333 aa21.19■□□□□ 0.98
SDCBP-209ENST00000522243 SDC4P31431 198 aa21.19■□□□□ 0.98
SDCBP-209ENST00000522243 PTP4A2Q12974 167 aa21.19■□□□□ 0.98
SDCBP-209ENST00000522243 CCDC183Q5T5S1 534 aa21.19■□□□□ 0.98
SDCBP-209ENST00000522243 AGBL4Q5VU57 503 aa21.19■□□□□ 0.98
SDCBP-209ENST00000522243 GLRX5Q86SX6 157 aa21.19■□□□□ 0.98
SDCBP-209ENST00000522243 PRPF39Q86UA1 669 aaKnown RBP21.19■□□□□ 0.98
SDCBP-209ENST00000522243 AOPEPQ8N6M6 819 aa21.19■□□□□ 0.98
SDCBP-209ENST00000522243 CHST14Q8NCH0 376 aa21.19■□□□□ 0.98
SDCBP-209ENST00000522243 OR2A12Q8NGT7 310 aa21.19■□□□□ 0.98
SDCBP-209ENST00000522243 ADAMTS14Q8WXS8 1223 aa21.19■□□□□ 0.98
SDCBP-209ENST00000522243 FAM131CQ96AQ9 280 aa21.19■□□□□ 0.98
SDCBP-209ENST00000522243 SKA1Q96BD8 255 aa21.19■□□□□ 0.98
SDCBP-209ENST00000522243 HSD3B7Q9H2F3 369 aa21.19■□□□□ 0.98
SDCBP-209ENST00000522243 TNKS2Q9H2K2 1166 aa21.19■□□□□ 0.98
SDCBP-209ENST00000522243 ZNF212Q9UDV6 495 aa21.19■□□□□ 0.98
SDCBP-209ENST00000522243 ZMIZ1Q9ULJ6 1067 aa21.19■□□□□ 0.98
SDCBP-209ENST00000522243 FARP1Q9Y4F1 1045 aaPredicted RBP21.19■□□□□ 0.98
SDCBP-209ENST00000522243 A0A1B0GTQ1 180 aa21.18■□□□□ 0.98
SDCBP-209ENST00000522243 A0A1W2PR77 199 aa21.18■□□□□ 0.98
SDCBP-209ENST00000522243 C2CD4BA6NLJ0 364 aa21.18■□□□□ 0.98
SDCBP-209ENST00000522243 RNF103O00237 685 aa21.18■□□□□ 0.98
SDCBP-209ENST00000522243 CBX4O00257 560 aa21.18■□□□□ 0.98
SDCBP-209ENST00000522243 KPNA3O00505 521 aaPredicted RBP21.18■□□□□ 0.98
SDCBP-209ENST00000522243 SLC7A4O43246 635 aa21.18■□□□□ 0.98
SDCBP-209ENST00000522243 ATXN1LP0C7T5 689 aaKnown RBP21.18■□□□□ 0.98
SDCBP-209ENST00000522243 CHRNA3P32297 505 aa21.18■□□□□ 0.98
SDCBP-209ENST00000522243 ADRA1BP35368 520 aa21.18■□□□□ 0.98
SDCBP-209ENST00000522243 NSFP46459 744 aaKnown RBP21.18■□□□□ 0.98
SDCBP-209ENST00000522243 CLEC16AQ2KHT3 1053 aa21.18■□□□□ 0.98
SDCBP-209ENST00000522243 ACBD5Q5T8D3 534 aaPredicted RBP21.18■□□□□ 0.98
SDCBP-209ENST00000522243 C22orf39Q6P5X5 142 aa21.18■□□□□ 0.98
SDCBP-209ENST00000522243 APTXQ7Z2E3 356 aaKnown RBP21.18■□□□□ 0.98
SDCBP-209ENST00000522243 GATAD2AQ86YP4 633 aa21.18■□□□□ 0.98
SDCBP-209ENST00000522243 ARRDC3Q96B67 414 aa21.18■□□□□ 0.98
SDCBP-209ENST00000522243 ERGIC2Q96RQ1 377 aa21.18■□□□□ 0.98
SDCBP-209ENST00000522243 ATP13A1Q9HD20 1204 aa21.18■□□□□ 0.98
SDCBP-209ENST00000522243 ADAM22Q9P0K1 906 aa21.18■□□□□ 0.98
SDCBP-209ENST00000522243 ARHGAP20Q9P2F6 1191 aa21.18■□□□□ 0.98
SDCBP-209ENST00000522243 ACTL7AQ9Y615 435 aa21.18■□□□□ 0.98
SDCBP-209ENST00000522243 ILVBLA1L0T0 632 aa21.17■□□□□ 0.98
SDCBP-209ENST00000522243 LATO43561 262 aa21.17■□□□□ 0.98
SDCBP-209ENST00000522243 MBD3O95983 291 aa21.17■□□□□ 0.98
SDCBP-209ENST00000522243 KRT3P12035 628 aa21.17■□□□□ 0.98
SDCBP-209ENST00000522243 ATP1A3P13637 1013 aa21.17■□□□□ 0.98
SDCBP-209ENST00000522243 TAS2R38P59533 333 aa21.17■□□□□ 0.98
SDCBP-209ENST00000522243 TYRO3Q06418 890 aa21.17■□□□□ 0.98
SDCBP-209ENST00000522243 ARL13BQ3SXY8 428 aa21.17■□□□□ 0.98
SDCBP-209ENST00000522243 KDF1Q8NAX2 398 aaPredicted RBP21.17■□□□□ 0.98
SDCBP-209ENST00000522243 CCDC114Q96M63 670 aa21.17■□□□□ 0.98
SDCBP-209ENST00000522243 ELF4Q99607 663 aaPredicted RBP21.17■□□□□ 0.98
SDCBP-209ENST00000522243 CDC6Q99741 560 aa21.17■□□□□ 0.98
SDCBP-209ENST00000522243 SELENOOQ9BVL4 669 aa21.17■□□□□ 0.98
SDCBP-209ENST00000522243 KDM4CQ9H3R0 1056 aa21.17■□□□□ 0.98
SDCBP-209ENST00000522243 TOR4AQ9NXH8 423 aa21.17■□□□□ 0.98
SDCBP-209ENST00000522243 TMEM63CQ9P1W3 806 aa21.17■□□□□ 0.98
SDCBP-209ENST00000522243 OR12D3Q9UGF7 316 aa21.17■□□□□ 0.98
SDCBP-209ENST00000522243 CACNA1BQ00975 2339 aa21.17■□□□□ 0.98
SDCBP-209ENST00000522243 KNL1Q8NG31 2342 aa21.17■□□□□ 0.98
SDCBP-209ENST00000522243 LRRC10BA6NIK2 292 aa21.16■□□□□ 0.98
SDCBP-209ENST00000522243 FAM72CH0Y354 149 aa21.16■□□□□ 0.98
SDCBP-209ENST00000522243 PCDHGA12O60330 932 aa21.16■□□□□ 0.98
SDCBP-209ENST00000522243 ZMPSTE24O75844 475 aa21.16■□□□□ 0.98
SDCBP-209ENST00000522243 RFC1P35251 1148 aaPredicted RBP21.16■□□□□ 0.98
SDCBP-209ENST00000522243 GRK6P43250 576 aa21.16■□□□□ 0.98
SDCBP-209ENST00000522243 PTPN9P43378 593 aa21.16■□□□□ 0.98
SDCBP-209ENST00000522243 CLCN6P51797 869 aa21.16■□□□□ 0.98
SDCBP-209ENST00000522243 ARF5P84085 180 aa21.16■□□□□ 0.98
SDCBP-209ENST00000522243 GNA12Q03113 381 aa21.16■□□□□ 0.98
SDCBP-209ENST00000522243 SLC45A4Q5BKX6 768 aa21.16■□□□□ 0.98
SDCBP-209ENST00000522243 ARSIQ5FYB1 569 aa21.16■□□□□ 0.98
SDCBP-209ENST00000522243 PIP5KL1Q5T9C9 394 aa21.16■□□□□ 0.98
SDCBP-209ENST00000522243 FAM72AQ5TYM5 149 aa21.16■□□□□ 0.98
SDCBP-209ENST00000522243 NAPEPLDQ6IQ20 393 aa21.16■□□□□ 0.98
SDCBP-209ENST00000522243 FAM72DQ6L9T8 149 aa21.16■□□□□ 0.98
SDCBP-209ENST00000522243 RWDD4Q6NW29 188 aaKnown RBP21.16■□□□□ 0.98
SDCBP-209ENST00000522243 FAM72BQ86X60 149 aa21.16■□□□□ 0.98
SDCBP-209ENST00000522243 CCDC185Q8N715 623 aa21.16■□□□□ 0.98
SDCBP-209ENST00000522243 GRIN3AQ8TCU5 1115 aa21.16■□□□□ 0.98
SDCBP-209ENST00000522243 FAM172AQ8WUF8 416 aa21.16■□□□□ 0.98
SDCBP-209ENST00000522243 KLK6Q92876 244 aa21.16■□□□□ 0.98
SDCBP-209ENST00000522243 GDF3Q9NR23 364 aa21.16■□□□□ 0.98
SDCBP-209ENST00000522243 NDFIP2Q9NV92 336 aa21.16■□□□□ 0.98
SDCBP-209ENST00000522243 PPARGC1AQ9UBK2 798 aaKnown RBP21.16■□□□□ 0.98
SDCBP-209ENST00000522243 CA5BQ9Y2D0 317 aa21.16■□□□□ 0.98
SDCBP-209ENST00000522243 PTPRBP23467 1997 aa21.16■□□□□ 0.98
SDCBP-209ENST00000522243 PLXNB3Q9ULL4 1909 aa21.16■□□□□ 0.98
SDCBP-209ENST00000522243 CHD8Q9HCK8 2581 aa21.15■□□□□ 0.98
SDCBP-209ENST00000522243 TLR4O00206 839 aa21.15■□□□□ 0.98
SDCBP-209ENST00000522243 DFNA5O60443 496 aa21.15■□□□□ 0.98
SDCBP-209ENST00000522243 RNGTTO60942 597 aaKnown RBP21.15■□□□□ 0.98
SDCBP-209ENST00000522243 GPD1P21695 349 aa21.15■□□□□ 0.98
SDCBP-209ENST00000522243 ACVRL1P37023 503 aa21.15■□□□□ 0.98
SDCBP-209ENST00000522243 RECQLP46063 649 aaPredicted RBP21.15■□□□□ 0.98
SDCBP-209ENST00000522243 DNA2P51530 1060 aa21.15■□□□□ 0.98
SDCBP-209ENST00000522243 HDAC4P56524 1084 aa21.15■□□□□ 0.98
SDCBP-209ENST00000522243 SHBQ15464 509 aa21.15■□□□□ 0.98
SDCBP-209ENST00000522243 CCDC157Q569K6 752 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms