RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 VANGL2Q9ULK5 521 aa11.8□□□□□ -0.52
MRPS28-206ENST00000520946 SATB2Q9UPW6 733 aa11.8□□□□□ -0.52
MRPS28-206ENST00000520946 A0A1W2PQ27 194 aa11.79□□□□□ -0.52
MRPS28-206ENST00000520946 A0A1W2PQ64 194 aa11.79□□□□□ -0.52
MRPS28-206ENST00000520946 E5RJQ4 531 aa11.79□□□□□ -0.52
MRPS28-206ENST00000520946 K7ESM1 405 aa11.79□□□□□ -0.52
MRPS28-206ENST00000520946 NEMP1O14524 444 aa11.79□□□□□ -0.52
MRPS28-206ENST00000520946 SCAMP1O15126 338 aa11.79□□□□□ -0.52
MRPS28-206ENST00000520946 CLDN11O75508 207 aa11.79□□□□□ -0.52
MRPS28-206ENST00000520946 DXOO77932 396 aaKnown RBP11.79□□□□□ -0.52
MRPS28-206ENST00000520946 RHOCP08134 193 aa11.79□□□□□ -0.52
MRPS28-206ENST00000520946 USP8P40818 1118 aa11.79□□□□□ -0.52
MRPS28-206ENST00000520946 GPD2P43304 727 aa11.79□□□□□ -0.52
MRPS28-206ENST00000520946 RPIAP49247 311 aa11.79□□□□□ -0.52
MRPS28-206ENST00000520946 DNA2P51530 1060 aa11.79□□□□□ -0.52
MRPS28-206ENST00000520946 SNX16P57768 344 aa11.79□□□□□ -0.52
MRPS28-206ENST00000520946 CENPCQ03188 943 aa11.79□□□□□ -0.52
MRPS28-206ENST00000520946 AUHQ13825 339 aaKnown RBP11.79□□□□□ -0.52
MRPS28-206ENST00000520946 CDKN3Q16667 212 aa11.79□□□□□ -0.52
MRPS28-206ENST00000520946 ZSCAN23Q3MJ62 389 aa11.79□□□□□ -0.52
MRPS28-206ENST00000520946 EFHC1Q5JVL4 640 aa11.79□□□□□ -0.52
MRPS28-206ENST00000520946 CDCP2Q5VXM1 449 aa11.79□□□□□ -0.52
MRPS28-206ENST00000520946 ZCCHC8Q6NZY4 707 aaKnown RBP11.79□□□□□ -0.52
MRPS28-206ENST00000520946 DENND1BQ6P3S1 775 aa11.79□□□□□ -0.52
MRPS28-206ENST00000520946 SH2D3CQ8N5H7 860 aa11.79□□□□□ -0.52
MRPS28-206ENST00000520946 TMEM145Q8NBT3 493 aa11.79□□□□□ -0.52
MRPS28-206ENST00000520946 STK32AQ8WU08 396 aa11.79□□□□□ -0.52
MRPS28-206ENST00000520946 KAT5Q92993 513 aa11.79□□□□□ -0.52
MRPS28-206ENST00000520946 SMARCE1Q969G3 411 aa11.79□□□□□ -0.52
MRPS28-206ENST00000520946 IFT43Q96FT9 208 aa11.79□□□□□ -0.52
MRPS28-206ENST00000520946 MED8Q96G25 268 aa11.79□□□□□ -0.52
MRPS28-206ENST00000520946 FEM1CQ96JP0 617 aa11.79□□□□□ -0.52
MRPS28-206ENST00000520946 NOX5Q96PH1 765 aa11.79□□□□□ -0.52
MRPS28-206ENST00000520946 GSDMAQ96QA5 445 aa11.79□□□□□ -0.52
MRPS28-206ENST00000520946 ZSWIM1Q9BR11 485 aa11.79□□□□□ -0.52
MRPS28-206ENST00000520946 ARHGAP9Q9BRR9 750 aa11.79□□□□□ -0.52
MRPS28-206ENST00000520946 SYNCQ9H7C4 482 aa11.79□□□□□ -0.52
MRPS28-206ENST00000520946 HELZ2Q9BYK8 2649 aaKnown RBP11.79□□□□□ -0.52
MRPS28-206ENST00000520946 CELSR3Q9NYQ7 3312 aa11.79□□□□□ -0.52
MRPS28-206ENST00000520946 LAMA5O15230 3695 aa11.79□□□□□ -0.52
MRPS28-206ENST00000520946 FAM237AA0A1B0GTK4 181 aa11.78□□□□□ -0.52
MRPS28-206ENST00000520946 TRIM49BA6NDI0 452 aa11.78□□□□□ -0.52
MRPS28-206ENST00000520946 PYCARD-AS1I3L0S3 204 aa11.78□□□□□ -0.52
MRPS28-206ENST00000520946 RIOK3O14730 519 aaKnown RBP11.78□□□□□ -0.52
MRPS28-206ENST00000520946 P4HA2O15460 535 aa11.78□□□□□ -0.52
MRPS28-206ENST00000520946 ARHGAP6O43182 974 aa11.78□□□□□ -0.52
MRPS28-206ENST00000520946 NEBLO76041 1014 aa11.78□□□□□ -0.52
MRPS28-206ENST00000520946 VASPP50552 380 aaPredicted RBP11.78□□□□□ -0.52
MRPS28-206ENST00000520946 RPS21P63220 83 aaKnown RBP11.78□□□□□ -0.52
MRPS28-206ENST00000520946 GCNT1Q02742 428 aa11.78□□□□□ -0.52
MRPS28-206ENST00000520946 NR0B2Q15466 257 aa11.78□□□□□ -0.52
MRPS28-206ENST00000520946 ISXQ2M1V0 245 aa11.78□□□□□ -0.52
MRPS28-206ENST00000520946 ZNF284Q2VY69 593 aa11.78□□□□□ -0.52
MRPS28-206ENST00000520946 ARSIQ5FYB1 569 aa11.78□□□□□ -0.52
MRPS28-206ENST00000520946 PIP5KL1Q5T9C9 394 aa11.78□□□□□ -0.52
MRPS28-206ENST00000520946 OR6B2Q6IFH4 312 aa11.78□□□□□ -0.52
MRPS28-206ENST00000520946 CXorf57Q6NSI4 855 aaKnown RBP11.78□□□□□ -0.52
MRPS28-206ENST00000520946 PCSK4Q6UW60 755 aa11.78□□□□□ -0.52
MRPS28-206ENST00000520946 LRRC31Q6UY01 552 aa11.78□□□□□ -0.52
MRPS28-206ENST00000520946 RBM44Q6ZP01 1051 aaKnown RBP11.78□□□□□ -0.52
MRPS28-206ENST00000520946 ERN2Q76MJ5 926 aaKnown RBP11.78□□□□□ -0.52
MRPS28-206ENST00000520946 EFL1Q7Z2Z2 1120 aaKnown RBP11.78□□□□□ -0.52
MRPS28-206ENST00000520946 DEFB106AQ8N104 65 aa11.78□□□□□ -0.52
MRPS28-206ENST00000520946 TMIEQ8NEW7 156 aa11.78□□□□□ -0.52
MRPS28-206ENST00000520946 GRIN3AQ8TCU5 1115 aa11.78□□□□□ -0.52
MRPS28-206ENST00000520946 LMX1AQ8TE12 382 aa11.78□□□□□ -0.52
MRPS28-206ENST00000520946 FAM131CQ96AQ9 280 aa11.78□□□□□ -0.52
MRPS28-206ENST00000520946 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.78□□□□□ -0.52
MRPS28-206ENST00000520946 SLC4A5Q9BY07 1137 aa11.78□□□□□ -0.52
MRPS28-206ENST00000520946 UBE2TQ9NPD8 197 aaPredicted RBP11.78□□□□□ -0.52
MRPS28-206ENST00000520946 IL36AQ9UHA7 158 aa11.78□□□□□ -0.52
MRPS28-206ENST00000520946 HS3ST3A1Q9Y663 406 aa11.78□□□□□ -0.52
MRPS28-206ENST00000520946 TDRD6O60522 2096 aaKnown RBP11.78□□□□□ -0.52
MRPS28-206ENST00000520946 LOC400499M0QZD8 3231 aa11.78□□□□□ -0.52
MRPS28-206ENST00000520946 ARID1BQ8NFD5 2236 aaPredicted RBP11.78□□□□□ -0.52
MRPS28-206ENST00000520946 C10orf142B7Z368 130 aa11.77□□□□□ -0.53
MRPS28-206ENST00000520946 FPGTO14772 594 aa11.77□□□□□ -0.53
MRPS28-206ENST00000520946 GRAP2O75791 330 aa11.77□□□□□ -0.53
MRPS28-206ENST00000520946 ENDOD1O94919 500 aa11.77□□□□□ -0.53
MRPS28-206ENST00000520946 ADCY5O95622 1261 aa11.77□□□□□ -0.53
MRPS28-206ENST00000520946 JUNDP17535 347 aa11.77□□□□□ -0.53
MRPS28-206ENST00000520946 GNA15P30679 374 aa11.77□□□□□ -0.53
MRPS28-206ENST00000520946 PPP1R2P41236 205 aa11.77□□□□□ -0.53
MRPS28-206ENST00000520946 RABIFP47224 123 aa11.77□□□□□ -0.53
MRPS28-206ENST00000520946 NEK3P51956 506 aa11.77□□□□□ -0.53
MRPS28-206ENST00000520946 PMS1P54277 932 aaKnown RBP11.77□□□□□ -0.53
MRPS28-206ENST00000520946 CDH4P55283 916 aa11.77□□□□□ -0.53
MRPS28-206ENST00000520946 TAS2R38P59533 333 aa11.77□□□□□ -0.53
MRPS28-206ENST00000520946 KIAA1614Q5VZ46 1190 aa11.77□□□□□ -0.53
MRPS28-206ENST00000520946 SEL1L3Q68CR1 1132 aa11.77□□□□□ -0.53
MRPS28-206ENST00000520946 KLHL10Q6JEL2 608 aa11.77□□□□□ -0.53
MRPS28-206ENST00000520946 KIAA1161Q6NSJ0 714 aa11.77□□□□□ -0.53
MRPS28-206ENST00000520946 PARGQ86W56 976 aa11.77□□□□□ -0.53
MRPS28-206ENST00000520946 CREBRFQ8IUR6 639 aa11.77□□□□□ -0.53
MRPS28-206ENST00000520946 RYBPQ8N488 228 aaPredicted RBP11.77□□□□□ -0.53
MRPS28-206ENST00000520946 EHBP1Q8NDI1 1231 aa11.77□□□□□ -0.53
MRPS28-206ENST00000520946 ZNF606Q8WXB4 792 aa11.77□□□□□ -0.53
MRPS28-206ENST00000520946 ARRDC3Q96B67 414 aa11.77□□□□□ -0.53
MRPS28-206ENST00000520946 ATXN7L3BQ96GX2 97 aa11.77□□□□□ -0.53
MRPS28-206ENST00000520946 CEP63Q96MT8 703 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms