RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 A0A1W2PR77 199 aa10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 TCRBV5S1A1TA0A578 114 aa10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 FAM221BA6H8Z2 402 aa10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 C1QTNF9BB2RNN3 333 aa10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 H0Y8X5 98 aa10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 PLK4O00444 970 aa10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 SMAD6O43541 496 aaKnown RBP10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 PCDHGA12O60330 932 aa10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 ZMPSTE24O75844 475 aa10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 PROS1P07225 676 aa10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 C1QTNF9P0C862 333 aa10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 KRT3P12035 628 aa10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 CDK11BP21127 795 aaKnown RBP10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 GLDCP23378 1020 aa10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 CD38P28907 300 aa10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 ADRA1BP35368 520 aa10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 SERPINH1P50454 418 aaKnown RBP10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 HDAC4P56524 1084 aa10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 C21orf59P57076 290 aa10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 GNA12Q03113 381 aa10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 C1QBPQ07021 282 aaKnown RBP10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 ARL13BQ3SXY8 428 aa10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 ANO6Q4KMQ2 910 aa10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 PIP5KL1Q5T9C9 394 aa10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 NAPEPLDQ6IQ20 393 aa10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 LINGO4Q6UY18 593 aa10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 PHLDB2Q86SQ0 1253 aa10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 NLRP14Q86W24 1093 aa10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 TRIM69Q86WT6 500 aa10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 CCDC185Q8N715 623 aa10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 TMIEQ8NEW7 156 aa10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 SETD7Q8WTS6 366 aaKnown RBP10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 FAM172AQ8WUF8 416 aa10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 NTAN1Q96AB6 310 aa10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 CCDC114Q96M63 670 aa10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 AGPAT1Q99943 283 aa10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 SYT11Q9BT88 431 aa10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 CEP44Q9C0F1 390 aa10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 NAT10Q9H0A0 1025 aaKnown RBP10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 OSBPL2Q9H1P3 480 aa10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 RETREG1Q9H6L5 497 aa10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 ATP13A1Q9HD20 1204 aa10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 ARHGAP20Q9P2F6 1191 aa10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 OR12D3Q9UGF7 316 aa10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 BTBD3Q9Y2F9 522 aa10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 PCDHB9Q9Y5E1 797 aa10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 ASCC3Q8N3C0 2202 aaKnown RBP10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 PI4KAP42356 2102 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 TBC1D3DA0A087WVF3 549 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 TBC1D3IA0A087WXS9 549 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 TBC1D3EA0A087X179 549 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 TBC1D3KA0A087X1G2 549 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 A0A1B0GTQ1 180 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 TBC1D3FA6NER0 549 aaPredicted RBP10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 SIGLEC16A6NMB1 481 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 TBC1D3LB9A6J9 549 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 FAM72CH0Y354 149 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 CBX4O00257 560 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 WNT9AO14904 365 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 BNIP3LO60238 219 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 DFNA5O60443 496 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 ZNF821O75541 412 aaPredicted RBP10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 DKK1O94907 266 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 TBC1D3HP0C7X1 549 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 FERP16591 822 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 GPD1P21695 349 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 CHRNA3P32297 505 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 RFC1P35251 1148 aaPredicted RBP10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 NUDT1P36639 197 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 MAPKAPK2P49137 400 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 TAS2R38P59533 333 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 ARF5P84085 180 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 SCAPQ12770 1279 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 SUZ12Q15022 739 aaKnown RBP10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 POM121L1PQ3SYA9 428 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 PPP1R15BQ5SWA1 713 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 FAM72AQ5TYM5 149 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 TBC1D3GQ6DHY5 549 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 TBC1D3CQ6IPX1 549 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 FAM72DQ6L9T8 149 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 FAM72BQ86X60 149 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 DRC7Q8IY82 874 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 TBC1D3Q8IZP1 549 aaPredicted RBP10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 ADAMTS14Q8WXS8 1223 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 BAP1Q92560 729 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 ARRDC3Q96B67 414 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 SKA1Q96BD8 255 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 SERAC1Q96JX3 654 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 SELENOOQ9BVL4 669 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 PREBQ9HCU5 417 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 AASDHPPTQ9NRN7 309 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 NDFIP2Q9NV92 336 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 SEPT11Q9NVA2 429 aaKnown RBP10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 TMEM248Q9NWD8 314 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 TOR4AQ9NXH8 423 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 MYO6Q9UM54 1294 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 DMTF1Q9Y222 760 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 MSRB2Q9Y3D2 182 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 FARP1Q9Y4F1 1045 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms