RNA–Protein interactions for RNA: ENST00000513801.5

ATP2C1-221, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,439 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-221ENST00000513801 SNAP29O95721 258 aa12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 ERVK-10P10266 1014 aa12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 SPNP16150 400 aa12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 HARS2P49590 506 aaKnown RBP12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 CACNB3P54284 484 aa12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 RHDQ02161 417 aa12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 CYP24A1Q07973 514 aa12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 OLIG2Q13516 323 aa12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 ELMO1Q92556 727 aa12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 FIG4Q92562 907 aa12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 DLG3Q92796 817 aa12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 LRCH3Q96II8 777 aa12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 ZNF641Q96N77 438 aaPredicted RBP12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 SH3GL1Q99961 368 aa12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 ZNF341Q9BYN7 854 aa12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 EFCAB1Q9HAE3 211 aa12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 CNOT11Q9UKZ1 510 aaKnown RBP12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 PCDHGC3Q9UN70 934 aa12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 ZNF701M0R085 212 aaPredicted RBP12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 HOXC11O43248 304 aaPredicted RBP12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 PTPN2P17706 415 aa12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 IST1P53990 364 aa12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 SESN2P58004 480 aaPredicted RBP12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 SLC25A11Q02978 314 aaKnown RBP12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 GPATCH4Q5T3I0 446 aaKnown RBP12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 TDRD10Q5VZ19 366 aaKnown RBP12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 SLFN13Q68D06 897 aa12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 UGT3A1Q6NUS8 523 aa12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 RSBN1LQ6PCB5 846 aaPredicted RBP12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 GET4Q7L5D6 327 aaPredicted RBP12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 FBXO11Q86XK2 927 aa12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 PHF13Q86YI8 300 aaPredicted RBP12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 CCDC60Q8IWA6 550 aaPredicted RBP12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 TMEM130Q8N3G9 435 aa12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 ACVR1CQ8NER5 493 aa12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 RP9Q8TA86 221 aaKnown RBP12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 ZNF420Q8TAQ5 688 aaPredicted RBP12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 SUN5Q8TC36 379 aa12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 ZNF347Q96SE7 839 aa12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 PSD2Q9BQI7 771 aa12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 TDRD1Q9BXT4 1180 aaKnown RBP12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 TRIM39Q9HCM9 518 aa12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 IFT80Q9P2H3 777 aaPredicted RBP12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 ZDHHC2Q9UIJ5 367 aa12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 COPG1Q9Y678 874 aaKnown RBP12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 UBE4BO95155 1302 aa12.66□□□□□ -0.38
ATP2C1-221ENST00000513801 TRIM38O00635 465 aa12.65□□□□□ -0.38
ATP2C1-221ENST00000513801 EI24O14681 340 aa12.65□□□□□ -0.38
ATP2C1-221ENST00000513801 GH2P01242 217 aa12.65□□□□□ -0.38
ATP2C1-221ENST00000513801 PRKACBP22694 351 aa12.65□□□□□ -0.38
ATP2C1-221ENST00000513801 GLRBP48167 497 aa12.65□□□□□ -0.38
ATP2C1-221ENST00000513801 GCNT1Q02742 428 aa12.65□□□□□ -0.38
ATP2C1-221ENST00000513801 POLD3Q15054 466 aaPredicted RBP12.65□□□□□ -0.38
ATP2C1-221ENST00000513801 GLRA4Q5JXX5 417 aa12.65□□□□□ -0.38
ATP2C1-221ENST00000513801 SIGIRRQ6IA17 410 aa12.65□□□□□ -0.38
ATP2C1-221ENST00000513801 SPATC1Q76KD6 591 aa12.65□□□□□ -0.38
ATP2C1-221ENST00000513801 MAGEE2Q8TD90 523 aaPredicted RBP12.65□□□□□ -0.38
ATP2C1-221ENST00000513801 SLC45A3Q96JT2 553 aa12.65□□□□□ -0.38
ATP2C1-221ENST00000513801 SIGLEC10Q96LC7 697 aa12.65□□□□□ -0.38
ATP2C1-221ENST00000513801 CDK5RAP1Q96SZ6 601 aaKnown RBP12.65□□□□□ -0.38
ATP2C1-221ENST00000513801 GATA5Q9BWX5 397 aaPredicted RBP12.65□□□□□ -0.38
ATP2C1-221ENST00000513801 CEP41Q9BYV8 373 aa12.65□□□□□ -0.38
ATP2C1-221ENST00000513801 DHX33Q9H6R0 707 aaKnown RBP12.65□□□□□ -0.38
ATP2C1-221ENST00000513801 NEK6Q9HC98 313 aa12.65□□□□□ -0.38
ATP2C1-221ENST00000513801 ABCB10Q9NRK6 738 aa12.65□□□□□ -0.38
ATP2C1-221ENST00000513801 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.65□□□□□ -0.38
ATP2C1-221ENST00000513801 FBXO9Q9UK97 447 aaPredicted RBP12.65□□□□□ -0.38
ATP2C1-221ENST00000513801 PSME2Q9UL46 239 aa12.65□□□□□ -0.38
ATP2C1-221ENST00000513801 FAM159BA6NKW6 160 aa12.65□□□□□ -0.38
ATP2C1-221ENST00000513801 TEX28O15482 410 aa12.65□□□□□ -0.38
ATP2C1-221ENST00000513801 BCAS1O75363 584 aaPredicted RBP12.65□□□□□ -0.38
ATP2C1-221ENST00000513801 FYNP06241 537 aa12.65□□□□□ -0.38
ATP2C1-221ENST00000513801 PRKCAP17252 672 aa12.65□□□□□ -0.38
ATP2C1-221ENST00000513801 ATP6V1B2P21281 511 aa12.65□□□□□ -0.38
ATP2C1-221ENST00000513801 ITPK1Q13572 414 aa12.65□□□□□ -0.38
ATP2C1-221ENST00000513801 WDR44Q5JSH3 913 aa12.65□□□□□ -0.38
ATP2C1-221ENST00000513801 SNAP47Q5SQN1 464 aa12.65□□□□□ -0.38
ATP2C1-221ENST00000513801 ZBTB41Q5SVQ8 909 aa12.65□□□□□ -0.38
ATP2C1-221ENST00000513801 PPP4R4Q6NUP7 873 aa12.65□□□□□ -0.38
ATP2C1-221ENST00000513801 AKAP14Q86UN6 197 aa12.65□□□□□ -0.38
ATP2C1-221ENST00000513801 SPPL2CQ8IUH8 684 aa12.65□□□□□ -0.38
ATP2C1-221ENST00000513801 WDTC1Q8N5D0 677 aa12.65□□□□□ -0.38
ATP2C1-221ENST00000513801 ATP6V0D2Q8N8Y2 350 aa12.65□□□□□ -0.38
ATP2C1-221ENST00000513801 CNDP1Q96KN2 507 aa12.65□□□□□ -0.38
ATP2C1-221ENST00000513801 AMNQ9BXJ7 453 aa12.65□□□□□ -0.38
ATP2C1-221ENST00000513801 MAGEB5Q9BZ81 275 aa12.65□□□□□ -0.38
ATP2C1-221ENST00000513801 CCDC167Q9P0B6 97 aa12.65□□□□□ -0.38
ATP2C1-221ENST00000513801 IGKV6D-41A0A0C4DH26 115 aa12.65□□□□□ -0.39
ATP2C1-221ENST00000513801 MEN1O00255 615 aa12.65□□□□□ -0.39
ATP2C1-221ENST00000513801 MFN2O95140 757 aa12.65□□□□□ -0.39
ATP2C1-221ENST00000513801 MYL4P12829 197 aa12.65□□□□□ -0.39
ATP2C1-221ENST00000513801 CDH1P12830 882 aa12.65□□□□□ -0.39
ATP2C1-221ENST00000513801 DDX5P17844 614 aaKnown RBP12.65□□□□□ -0.39
ATP2C1-221ENST00000513801 MYF6P23409 242 aa12.65□□□□□ -0.39
ATP2C1-221ENST00000513801 SHMT1P34896 483 aa12.65□□□□□ -0.39
ATP2C1-221ENST00000513801 TGFBR1P36897 503 aa12.65□□□□□ -0.39
ATP2C1-221ENST00000513801 NME5P56597 212 aa12.65□□□□□ -0.39
ATP2C1-221ENST00000513801 AP3B2Q13367 1082 aa12.65□□□□□ -0.39
ATP2C1-221ENST00000513801 CDO1Q16878 200 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms