RNA–Protein interactions for RNA: ENST00000512725.5

DDR1-269, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-269ENST00000512725 EDRF1Q3B7T1 1238 aa16.37■□□□□ 0.21
DDR1-269ENST00000512725 GCNT7Q6ZNI0 430 aa16.37■□□□□ 0.21
DDR1-269ENST00000512725 USP53Q70EK8 1073 aa16.37■□□□□ 0.21
DDR1-269ENST00000512725 JAMLQ86YT9 394 aa16.37■□□□□ 0.21
DDR1-269ENST00000512725 PPM1KQ8N3J5 372 aa16.37■□□□□ 0.21
DDR1-269ENST00000512725 EXD3Q8N9H8 876 aa16.37■□□□□ 0.21
DDR1-269ENST00000512725 ATP11CQ8NB49 1132 aa16.37■□□□□ 0.21
DDR1-269ENST00000512725 ZNF548Q8NEK5 533 aaPredicted RBP16.37■□□□□ 0.21
DDR1-269ENST00000512725 LMX1AQ8TE12 382 aa16.37■□□□□ 0.21
DDR1-269ENST00000512725 CCDC114Q96M63 670 aa16.37■□□□□ 0.21
DDR1-269ENST00000512725 CCNL2Q96S94 520 aaPredicted RBP16.37■□□□□ 0.21
DDR1-269ENST00000512725 MUC3BQ9H195 1237 aa16.37■□□□□ 0.21
DDR1-269ENST00000512725 FAM204AQ9H8W3 233 aa16.37■□□□□ 0.21
DDR1-269ENST00000512725 KIF26BQ2KJY2 2108 aa16.36■□□□□ 0.21
DDR1-269ENST00000512725 CTSLP07711 333 aa16.36■□□□□ 0.21
DDR1-269ENST00000512725 CHRNA3P32297 505 aa16.36■□□□□ 0.21
DDR1-269ENST00000512725 DPYDQ12882 1025 aa16.36■□□□□ 0.21
DDR1-269ENST00000512725 NR0B2Q15466 257 aa16.36■□□□□ 0.21
DDR1-269ENST00000512725 ZCWPW2Q504Y3 356 aa16.36■□□□□ 0.21
DDR1-269ENST00000512725 TTC39BQ5VTQ0 682 aaPredicted RBP16.36■□□□□ 0.21
DDR1-269ENST00000512725 CXorf57Q6NSI4 855 aaKnown RBP16.36■□□□□ 0.21
DDR1-269ENST00000512725 NEK5Q6P3R8 708 aa16.36■□□□□ 0.21
DDR1-269ENST00000512725 SH2D3CQ8N5H7 860 aa16.36■□□□□ 0.21
DDR1-269ENST00000512725 UBR7Q8N806 425 aa16.36■□□□□ 0.21
DDR1-269ENST00000512725 TPCN2Q8NHX9 752 aa16.36■□□□□ 0.21
DDR1-269ENST00000512725 WDR36Q8NI36 951 aaKnown RBP16.36■□□□□ 0.21
DDR1-269ENST00000512725 GRIN3AQ8TCU5 1115 aa16.36■□□□□ 0.21
DDR1-269ENST00000512725 NT5C1BQ96P26 610 aa16.36■□□□□ 0.21
DDR1-269ENST00000512725 IL12RB2Q99665 862 aa16.36■□□□□ 0.21
DDR1-269ENST00000512725 TSG101Q99816 390 aa16.36■□□□□ 0.21
DDR1-269ENST00000512725 ZSWIM1Q9BR11 485 aa16.36■□□□□ 0.21
DDR1-269ENST00000512725 FEM1AQ9BSK4 669 aa16.36■□□□□ 0.21
DDR1-269ENST00000512725 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.36■□□□□ 0.21
DDR1-269ENST00000512725 RCOR1Q9UKL0 485 aa16.36■□□□□ 0.21
DDR1-269ENST00000512725 ZFR2Q9UPR6 939 aaKnown RBP16.36■□□□□ 0.21
DDR1-269ENST00000512725 COQ4Q9Y3A0 265 aa16.36■□□□□ 0.21
DDR1-269ENST00000512725 PCDHGA8Q9Y5G5 932 aa16.36■□□□□ 0.21
DDR1-269ENST00000512725 CDRT15L2A8MXV6 281 aa16.35■□□□□ 0.21
DDR1-269ENST00000512725 AQP9O43315 295 aa16.35■□□□□ 0.21
DDR1-269ENST00000512725 GJB6O95452 261 aa16.35■□□□□ 0.21
DDR1-269ENST00000512725 HSP90AA1P07900 732 aaKnown RBP16.35■□□□□ 0.21
DDR1-269ENST00000512725 JUNDP17535 347 aa16.35■□□□□ 0.21
DDR1-269ENST00000512725 CMA1P23946 247 aa16.35■□□□□ 0.21
DDR1-269ENST00000512725 ACADSBP45954 432 aa16.35■□□□□ 0.21
DDR1-269ENST00000512725 PLK1P53350 603 aa16.35■□□□□ 0.21
DDR1-269ENST00000512725 PITX1P78337 314 aaPredicted RBP16.35■□□□□ 0.21
DDR1-269ENST00000512725 ARL13BQ3SXY8 428 aa16.35■□□□□ 0.21
DDR1-269ENST00000512725 PERM1Q5SV97 790 aa16.35■□□□□ 0.21
DDR1-269ENST00000512725 ATL3Q6DD88 541 aa16.35■□□□□ 0.21
DDR1-269ENST00000512725 IGF2-ASQ6U949 168 aa16.35■□□□□ 0.21
DDR1-269ENST00000512725 ATG14Q6ZNE5 492 aa16.35■□□□□ 0.21
DDR1-269ENST00000512725 ABI3BPQ7Z7G0 1075 aa16.35■□□□□ 0.21
DDR1-269ENST00000512725 DCP2Q8IU60 420 aaKnown RBP16.35■□□□□ 0.21
DDR1-269ENST00000512725 OR52K2Q8NGK3 314 aa16.35■□□□□ 0.21
DDR1-269ENST00000512725 EXTL1Q92935 676 aa16.35■□□□□ 0.21
DDR1-269ENST00000512725 GRAMD1AQ96CP6 724 aa16.35■□□□□ 0.21
DDR1-269ENST00000512725 IFT43Q96FT9 208 aa16.35■□□□□ 0.21
DDR1-269ENST00000512725 PRR11Q96HE9 360 aaPredicted RBP16.35■□□□□ 0.21
DDR1-269ENST00000512725 TRIM62Q9BVG3 475 aa16.35■□□□□ 0.21
DDR1-269ENST00000512725 POPDC2Q9HBU9 364 aa16.35■□□□□ 0.21
DDR1-269ENST00000512725 NCKIPSDQ9NZQ3 722 aa16.35■□□□□ 0.21
DDR1-269ENST00000512725 VANGL2Q9ULK5 521 aa16.35■□□□□ 0.21
DDR1-269ENST00000512725 COL12A1Q99715 3063 aa16.35■□□□□ 0.21
DDR1-269ENST00000512725 SPTA1P02549 2419 aa16.35■□□□□ 0.21
DDR1-269ENST00000512725 POM121BA6NF01 834 aa16.34■□□□□ 0.21
DDR1-269ENST00000512725 ENDOD1O94919 500 aa16.34■□□□□ 0.21
DDR1-269ENST00000512725 PAK4O96013 591 aaPredicted RBP16.34■□□□□ 0.21
DDR1-269ENST00000512725 PRNPP04156 253 aa16.34■□□□□ 0.21
DDR1-269ENST00000512725 SRCP12931 536 aa16.34■□□□□ 0.21
DDR1-269ENST00000512725 RRM1P23921 792 aa16.34■□□□□ 0.21
DDR1-269ENST00000512725 GGCXP38435 758 aa16.34■□□□□ 0.21
DDR1-269ENST00000512725 KRT83P78385 493 aa16.34■□□□□ 0.21
DDR1-269ENST00000512725 PDE1CQ14123 709 aaPredicted RBP16.34■□□□□ 0.21
DDR1-269ENST00000512725 SPIDRQ14159 915 aa16.34■□□□□ 0.21
DDR1-269ENST00000512725 FZD2Q14332 565 aa16.34■□□□□ 0.21
DDR1-269ENST00000512725 ARSIQ5FYB1 569 aa16.34■□□□□ 0.21
DDR1-269ENST00000512725 COLEC12Q5KU26 742 aa16.34■□□□□ 0.21
DDR1-269ENST00000512725 FBXL22Q6P050 247 aa16.34■□□□□ 0.21
DDR1-269ENST00000512725 ERN2Q76MJ5 926 aaKnown RBP16.34■□□□□ 0.21
DDR1-269ENST00000512725 PARGQ86W56 976 aa16.34■□□□□ 0.21
DDR1-269ENST00000512725 LURAP1LQ8IV03 231 aa16.34■□□□□ 0.21
DDR1-269ENST00000512725 CHST14Q8NCH0 376 aa16.34■□□□□ 0.21
DDR1-269ENST00000512725 GLMNQ92990 594 aa16.34■□□□□ 0.21
DDR1-269ENST00000512725 KAT5Q92993 513 aa16.34■□□□□ 0.21
DDR1-269ENST00000512725 BMFQ96LC9 184 aa16.34■□□□□ 0.21
DDR1-269ENST00000512725 PRMT1Q99873 361 aaKnown RBP16.34■□□□□ 0.21
DDR1-269ENST00000512725 SLC17A9Q9BYT1 436 aa16.34■□□□□ 0.21
DDR1-269ENST00000512725 TNKS2Q9H2K2 1166 aa16.34■□□□□ 0.21
DDR1-269ENST00000512725 DDIT4Q9NX09 232 aa16.34■□□□□ 0.21
DDR1-269ENST00000512725 SSUH2Q9Y2M2 353 aa16.34■□□□□ 0.21
DDR1-269ENST00000512725 HS3ST3A1Q9Y663 406 aa16.34■□□□□ 0.21
DDR1-269ENST00000512725 CCDC187A0A096LP49 1063 aa16.33■□□□□ 0.2
DDR1-269ENST00000512725 K7ERQ8 282 aa16.33■□□□□ 0.2
DDR1-269ENST00000512725 AGRPO00253 132 aa16.33■□□□□ 0.2
DDR1-269ENST00000512725 CASC3O15234 703 aaKnown RBP16.33■□□□□ 0.2
DDR1-269ENST00000512725 SNAP91O60641 907 aa16.33■□□□□ 0.2
DDR1-269ENST00000512725 MT-CO1P00395 513 aa16.33■□□□□ 0.2
DDR1-269ENST00000512725 CSF2P04141 144 aa16.33■□□□□ 0.2
DDR1-269ENST00000512725 SLC2A3P11169 496 aa16.33■□□□□ 0.2
DDR1-269ENST00000512725 KRT5P13647 590 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms