RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 LATS1O95835 1130 aa9.39□□□□□ -0.91
NUP54-211ENST00000512151 BMP15O95972 392 aa9.39□□□□□ -0.91
NUP54-211ENST00000512151 C4BPAP04003 597 aaKnown RBP9.39□□□□□ -0.91
NUP54-211ENST00000512151 SLFN14P0C7P3 912 aa9.39□□□□□ -0.91
NUP54-211ENST00000512151 JMJD7P0C870 316 aa9.39□□□□□ -0.91
NUP54-211ENST00000512151 NR1D1P20393 614 aa9.39□□□□□ -0.91
NUP54-211ENST00000512151 HNRNPA2B1P22626 353 aaKnown RBP9.39□□□□□ -0.91
NUP54-211ENST00000512151 AKT2P31751 481 aa9.39□□□□□ -0.91
NUP54-211ENST00000512151 ECT2LQ008S8 904 aa9.39□□□□□ -0.91
NUP54-211ENST00000512151 EIF2B5Q13144 721 aaKnown RBP9.39□□□□□ -0.91
NUP54-211ENST00000512151 BIRC3Q13489 604 aa9.39□□□□□ -0.91
NUP54-211ENST00000512151 C1orf61Q13536 156 aa9.39□□□□□ -0.91
NUP54-211ENST00000512151 FGL2Q14314 439 aa9.39□□□□□ -0.91
NUP54-211ENST00000512151 RAB41Q5JT25 222 aa9.39□□□□□ -0.91
NUP54-211ENST00000512151 PPP1R26Q5T8A7 1209 aaPredicted RBP9.39□□□□□ -0.91
NUP54-211ENST00000512151 SEL1L3Q68CR1 1132 aa9.39□□□□□ -0.91
NUP54-211ENST00000512151 SHC4Q6S5L8 630 aa9.39□□□□□ -0.91
NUP54-211ENST00000512151 CARNMT1Q8N4J0 409 aa9.39□□□□□ -0.91
NUP54-211ENST00000512151 WDR48Q8TAF3 677 aa9.39□□□□□ -0.91
NUP54-211ENST00000512151 EDEM1Q92611 657 aa9.39□□□□□ -0.91
NUP54-211ENST00000512151 ABHD17AQ96GS6 310 aa9.39□□□□□ -0.91
NUP54-211ENST00000512151 SCAND2PQ9GZW5 306 aaPredicted RBP9.39□□□□□ -0.91
NUP54-211ENST00000512151 AGPAT3Q9NRZ7 376 aa9.39□□□□□ -0.91
NUP54-211ENST00000512151 PANK4Q9NVE7 773 aa9.39□□□□□ -0.91
NUP54-211ENST00000512151 PPM1HQ9ULR3 514 aa9.39□□□□□ -0.91
NUP54-211ENST00000512151 PADI4Q9UM07 663 aa9.39□□□□□ -0.91
NUP54-211ENST00000512151 MTORP42345 2549 aa9.39□□□□□ -0.91
NUP54-211ENST00000512151 SPTY2D1-AS1A0A0U1RR47 76 aa9.38□□□□□ -0.91
NUP54-211ENST00000512151 A0A1W2PQ27 194 aa9.38□□□□□ -0.91
NUP54-211ENST00000512151 A0A1W2PQ64 194 aa9.38□□□□□ -0.91
NUP54-211ENST00000512151 A0A1W2PQC6 194 aa9.38□□□□□ -0.91
NUP54-211ENST00000512151 PRR19A6NJB7 356 aa9.38□□□□□ -0.91
NUP54-211ENST00000512151 TULP2O00295 520 aa9.38□□□□□ -0.91
NUP54-211ENST00000512151 TPP1O14773 563 aa9.38□□□□□ -0.91
NUP54-211ENST00000512151 CUTAO60888 179 aa9.38□□□□□ -0.91
NUP54-211ENST00000512151 CELA2BP08218 269 aaPredicted RBP9.38□□□□□ -0.91
NUP54-211ENST00000512151 JUNDP17535 347 aa9.38□□□□□ -0.91
NUP54-211ENST00000512151 CCKBRP32239 447 aa9.38□□□□□ -0.91
NUP54-211ENST00000512151 LONP1P36776 959 aaKnown RBP9.38□□□□□ -0.91
NUP54-211ENST00000512151 ARSDP51689 593 aa9.38□□□□□ -0.91
NUP54-211ENST00000512151 MAPK10P53779 464 aa9.38□□□□□ -0.91
NUP54-211ENST00000512151 KRTAP21-3Q3LHN1 58 aa9.38□□□□□ -0.91
NUP54-211ENST00000512151 MAMDC2Q7Z304 686 aaPredicted RBP9.38□□□□□ -0.91
NUP54-211ENST00000512151 PIGZQ86VD9 579 aa9.38□□□□□ -0.91
NUP54-211ENST00000512151 HORMAD1Q86X24 394 aa9.38□□□□□ -0.91
NUP54-211ENST00000512151 CFAP52Q8N1V2 620 aa9.38□□□□□ -0.91
NUP54-211ENST00000512151 ARHGAP18Q8N392 663 aa9.38□□□□□ -0.91
NUP54-211ENST00000512151 SDR16C5Q8N3Y7 309 aa9.38□□□□□ -0.91
NUP54-211ENST00000512151 NAT6Q93015 286 aa9.38□□□□□ -0.91
NUP54-211ENST00000512151 PMEPA1Q969W9 287 aa9.38□□□□□ -0.91
NUP54-211ENST00000512151 CCDC74AQ96AQ1 378 aa9.38□□□□□ -0.91
NUP54-211ENST00000512151 SPAG5Q96R06 1193 aa9.38□□□□□ -0.91
NUP54-211ENST00000512151 GFM1Q96RP9 751 aaKnown RBP9.38□□□□□ -0.91
NUP54-211ENST00000512151 IL12RB2Q99665 862 aa9.38□□□□□ -0.91
NUP54-211ENST00000512151 ULBP1Q9BZM6 244 aa9.38□□□□□ -0.91
NUP54-211ENST00000512151 STRADBQ9C0K7 418 aa9.38□□□□□ -0.91
NUP54-211ENST00000512151 PCDHB11Q9Y5F2 797 aa9.38□□□□□ -0.91
NUP54-211ENST00000512151 TRPM6Q9BX84 2022 aa9.38□□□□□ -0.91
NUP54-211ENST00000512151 SHANK1Q9Y566 2161 aa9.38□□□□□ -0.91
NUP54-211ENST00000512151 HIVEP1P15822 2718 aa9.38□□□□□ -0.91
NUP54-211ENST00000512151 A0A087X0B3 334 aa9.37□□□□□ -0.91
NUP54-211ENST00000512151 A6NNZ2 444 aa9.37□□□□□ -0.91
NUP54-211ENST00000512151 LRRIQ3A6PVS8 624 aaPredicted RBP9.37□□□□□ -0.91
NUP54-211ENST00000512151 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.37□□□□□ -0.91
NUP54-211ENST00000512151 DUX1O43812 170 aa9.37□□□□□ -0.91
NUP54-211ENST00000512151 ACSL4O60488 711 aa9.37□□□□□ -0.91
NUP54-211ENST00000512151 IGLV3-27P01718 113 aa9.37□□□□□ -0.91
NUP54-211ENST00000512151 RPLP0P05388 317 aaKnown RBP9.37□□□□□ -0.91
NUP54-211ENST00000512151 LIFP15018 202 aa9.37□□□□□ -0.91
NUP54-211ENST00000512151 ME1P48163 572 aa9.37□□□□□ -0.91
NUP54-211ENST00000512151 ADKP55263 362 aaKnown RBP9.37□□□□□ -0.91
NUP54-211ENST00000512151 INCA1Q0VD86 236 aa9.37□□□□□ -0.91
NUP54-211ENST00000512151 TMEM259Q4ZIN3 620 aa9.37□□□□□ -0.91
NUP54-211ENST00000512151 LACTB2Q53H82 288 aaPredicted RBP9.37□□□□□ -0.91
NUP54-211ENST00000512151 PM20D1Q6GTS8 502 aa9.37□□□□□ -0.91
NUP54-211ENST00000512151 TMPRSS9Q7Z410 1059 aa9.37□□□□□ -0.91
NUP54-211ENST00000512151 PARGQ86W56 976 aa9.37□□□□□ -0.91
NUP54-211ENST00000512151 KYQ8NBH2 561 aa9.37□□□□□ -0.91
NUP54-211ENST00000512151 HJURPQ8NCD3 748 aaPredicted RBP9.37□□□□□ -0.91
NUP54-211ENST00000512151 OR8D1Q8WZ84 308 aa9.37□□□□□ -0.91
NUP54-211ENST00000512151 NKD1Q969G9 470 aa9.37□□□□□ -0.91
NUP54-211ENST00000512151 CLPBQ9H078 707 aa9.37□□□□□ -0.91
NUP54-211ENST00000512151 OCEL1Q9H607 264 aa9.37□□□□□ -0.91
NUP54-211ENST00000512151 LMBRD1Q9NUN5 540 aa9.37□□□□□ -0.91
NUP54-211ENST00000512151 PLA2G2EQ9NZK7 142 aa9.37□□□□□ -0.91
NUP54-211ENST00000512151 STK17AQ9UEE5 414 aa9.37□□□□□ -0.91
NUP54-211ENST00000512151 CEP83Q9Y592 693 aa9.37□□□□□ -0.91
NUP54-211ENST00000512151 PCNX1Q96RV3 2341 aa9.37□□□□□ -0.91
NUP54-211ENST00000512151 YJEFN3A6XGL0 299 aa9.37□□□□□ -0.91
NUP54-211ENST00000512151 E7ENQ6 273 aa9.37□□□□□ -0.91
NUP54-211ENST00000512151 H3BM21 787 aa9.37□□□□□ -0.91
NUP54-211ENST00000512151 NKX2-8O15522 239 aa9.37□□□□□ -0.91
NUP54-211ENST00000512151 ZBED1O96006 694 aa9.37□□□□□ -0.91
NUP54-211ENST00000512151 CTSLP07711 333 aa9.37□□□□□ -0.91
NUP54-211ENST00000512151 PRF1P14222 555 aa9.37□□□□□ -0.91
NUP54-211ENST00000512151 RPIAP49247 311 aa9.37□□□□□ -0.91
NUP54-211ENST00000512151 TKTL1P51854 596 aa9.37□□□□□ -0.91
NUP54-211ENST00000512151 ZFP36L1Q07352 338 aaKnown RBP9.37□□□□□ -0.91
NUP54-211ENST00000512151 KLRB1Q12918 225 aa9.37□□□□□ -0.91
NUP54-211ENST00000512151 CDH18Q13634 790 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms