RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 BRINP2Q9C0B6 783 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 NMRAL1Q9HBL8 299 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 FANCFQ9NPI8 374 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 DNMT3LQ9UJW3 386 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 GTF3C4Q9UKN8 822 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 ZMYND8Q9ULU4 1186 aaPredicted RBP5.86□□□□□ -1.47
USP38-203ENST00000511739 SNX12Q9UMY4 172 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 COL14A1Q05707 1796 aaKnown RBP5.86□□□□□ -1.47
USP38-203ENST00000511739 BTN3A1O00481 513 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 KPNA5O15131 536 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 MFN2O95140 757 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 MT-CO1P00395 513 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 LTFP02788 710 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 CYP11B1P15538 503 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 GNSP15586 552 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 CYP2F1P24903 491 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 S100A3P33764 101 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 MAPK8P45983 427 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 NPTX2P47972 431 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 POLD2P49005 469 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 MRPS35P82673 323 aaKnown RBP5.86□□□□□ -1.47
USP38-203ENST00000511739 CXCL9Q07325 125 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 AGKQ53H12 422 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 GALNT7Q86SF2 657 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 MTFMTQ96DP5 389 aaKnown RBP5.86□□□□□ -1.47
USP38-203ENST00000511739 SPATA9Q9BWV2 254 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 UNKQ9C0B0 810 aaKnown RBP5.86□□□□□ -1.47
USP38-203ENST00000511739 POLR1EQ9GZS1 481 aaKnown RBP5.86□□□□□ -1.47
USP38-203ENST00000511739 MAT2BQ9NZL9 334 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 SHOC2Q9UQ13 582 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 PRKAB1Q9Y478 270 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 TMEM120BA0PK00 339 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 H0Y858 1186 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 QSOX1O00391 747 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 FOXN1O15353 648 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 SCGNO76038 276 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 EPN2O95208 641 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 CYP1A1P04798 512 aaPredicted RBP5.86□□□□□ -1.47
USP38-203ENST00000511739 FCGR1AP12314 374 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 ATP6V1B1P15313 513 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 KCNA3P22001 575 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 PSMB9P28065 219 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 TPP2P29144 1249 aaPredicted RBP5.86□□□□□ -1.47
USP38-203ENST00000511739 FMO4P31512 558 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 COILP38432 576 aaPredicted RBP5.86□□□□□ -1.47
USP38-203ENST00000511739 MYL6P60660 151 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 ABRQ12979 859 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 AP5B1Q2VPB7 878 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 CXCL17Q6UXB2 119 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 BNC2Q6ZN30 1099 aaPredicted RBP5.86□□□□□ -1.47
USP38-203ENST00000511739 ZNF410Q86VK4 478 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 FBXO36Q8NEA4 188 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 REPS2Q8NFH8 660 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 NSMCE2Q96MF7 247 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 LRRC1Q9BTT6 524 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 SPATA5L1Q9BVQ7 753 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 RHOBTB2Q9BYZ6 727 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 ATP13A3Q9H7F0 1226 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 BARX2Q9UMQ3 279 aaPredicted RBP5.86□□□□□ -1.47
USP38-203ENST00000511739 UBDO15205 165 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 EPORP19235 508 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 CNTFP26441 200 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 STAT5AP42229 794 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 MMP13P45452 471 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 TOB1P50616 345 aaPredicted RBP5.86□□□□□ -1.47
USP38-203ENST00000511739 CASP9P55211 416 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 OTUD4Q01804 1114 aaKnown RBP5.86□□□□□ -1.47
USP38-203ENST00000511739 INAVAQ3KP66 663 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 GPR141Q7Z602 305 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 FAM126BQ8IXS8 530 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 GPC2Q8N158 579 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 HCAR2Q8TDS4 363 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 EEF1AKMT1Q8WVE0 214 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 TRIM63Q969Q1 353 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 MRIQ9BWK5 157 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 RTFDC1Q9BY42 306 aaPredicted RBP5.86□□□□□ -1.47
USP38-203ENST00000511739 CAB39LQ9H9S4 337 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 CISHQ9NSE2 258 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 CMTM6Q9NX76 183 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 A0A0A6YYK5 440 aaPredicted RBP5.85□□□□□ -1.47
USP38-203ENST00000511739 RHPN2P1A8MT19 583 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 SCAMP3O14828 347 aaKnown RBP5.85□□□□□ -1.47
USP38-203ENST00000511739 TBL1XO60907 577 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 PLEKP08567 350 aaPredicted RBP5.85□□□□□ -1.47
USP38-203ENST00000511739 BMP7P18075 431 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 ERVK-9P63128 1117 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 ERVK-24P63145 666 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 UBXN2BQ14CS0 331 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 C2CD6Q53TS8 623 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 FIGNQ5HY92 759 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 INTS11Q5TA45 600 aaKnown RBP5.85□□□□□ -1.47
USP38-203ENST00000511739 DNAJC14Q6Y2X3 702 aaPredicted RBP5.85□□□□□ -1.47
USP38-203ENST00000511739 EXOC3L1Q86VI1 746 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 ATCAYQ86WG3 371 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 ARMC8Q8IUR7 673 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 SPATA20Q8TB22 786 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 MTMR9Q96QG7 549 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 GAD1Q99259 594 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 ASB8Q9H765 288 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 ABCC13Q9NSE7 274 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms