RNA–Protein interactions for RNA: ENST00000507485.1

RPS3A-206, Transcript of ribosomal protein S3A, humanhuman

TSL 1 (best)

Gene RPS3A, Length 1,526 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-206ENST00000507485 BEND5Q7L4P6 421 aa9.27□□□□□ -0.93
RPS3A-206ENST00000507485 PRICKLE2Q7Z3G6 844 aa9.27□□□□□ -0.93
RPS3A-206ENST00000507485 C14orf80Q86SX3 495 aa9.27□□□□□ -0.93
RPS3A-206ENST00000507485 TMEM110Q86TL2 294 aa9.27□□□□□ -0.93
RPS3A-206ENST00000507485 LRRN4Q8WUT4 740 aa9.27□□□□□ -0.93
RPS3A-206ENST00000507485 ZNF606Q8WXB4 792 aa9.27□□□□□ -0.93
RPS3A-206ENST00000507485 ZNF837Q96EG3 531 aaPredicted RBP9.27□□□□□ -0.93
RPS3A-206ENST00000507485 SERAC1Q96JX3 654 aa9.27□□□□□ -0.93
RPS3A-206ENST00000507485 CNDP2Q96KP4 475 aaKnown RBP9.27□□□□□ -0.93
RPS3A-206ENST00000507485 TIGD1Q96MW7 591 aa9.27□□□□□ -0.93
RPS3A-206ENST00000507485 CPXM1Q96SM3 734 aa9.27□□□□□ -0.93
RPS3A-206ENST00000507485 ATP6V1DQ9Y5K8 247 aa9.27□□□□□ -0.93
RPS3A-206ENST00000507485 OR51B4Q9Y5P0 310 aa9.27□□□□□ -0.93
RPS3A-206ENST00000507485 KNTC1P50748 2209 aa9.27□□□□□ -0.93
RPS3A-206ENST00000507485 SYNJ2BP-COX16A0A087WUM0 186 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 LRRC72A6NJI9 287 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 TLR4O00206 839 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 RNASEH1O60930 286 aaKnown RBP9.26□□□□□ -0.93
RPS3A-206ENST00000507485 GRAP2O75791 330 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 LETM1O95202 739 aaPredicted RBP9.26□□□□□ -0.93
RPS3A-206ENST00000507485 LDOC1O95751 146 aaPredicted RBP9.26□□□□□ -0.93
RPS3A-206ENST00000507485 IL1BP01584 269 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 PRB1P04280 392 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 ITGAVP06756 1048 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 KRT5P13647 590 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 TFE3P19532 575 aaPredicted RBP9.26□□□□□ -0.93
RPS3A-206ENST00000507485 C5AR1P21730 350 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 MAT2AP31153 395 aaKnown RBP9.26□□□□□ -0.93
RPS3A-206ENST00000507485 PLK1P53350 603 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 TAS2R38P59533 333 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 CNTN1Q12860 1018 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 PDCLQ13371 301 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 MORC3Q14149 939 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 NR6A1Q15406 480 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 AGBL4Q5VU57 503 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 FBXL19Q6PCT2 694 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 SND1Q7KZF4 910 aaKnown RBP eCLIP9.26□□□□□ -0.93
RPS3A-206ENST00000507485 TMPRSS12Q86WS5 348 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 DEFB106AQ8N104 65 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 STK32AQ8WU08 396 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 BTN2A3PQ96KV6 586 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 SLC2A13Q96QE2 648 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 DDX50Q9BQ39 737 aaKnown RBP9.26□□□□□ -0.93
RPS3A-206ENST00000507485 CRACR2AQ9BSW2 395 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 POPDC2Q9HBU9 364 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 UBE2TQ9NPD8 197 aaPredicted RBP9.26□□□□□ -0.93
RPS3A-206ENST00000507485 COX16Q9P0S2 106 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 TBC1D3DA0A087WVF3 549 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 TBC1D3IA0A087WXS9 549 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 TBC1D3EA0A087X179 549 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 TBC1D3KA0A087X1G2 549 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 FAM170AA1A519 330 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 TYW5A2RUC4 315 aaKnown RBP9.26□□□□□ -0.93
RPS3A-206ENST00000507485 TBC1D3FA6NER0 549 aaPredicted RBP9.26□□□□□ -0.93
RPS3A-206ENST00000507485 TBC1D3LB9A6J9 549 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 ERVH48-1M5A8F1 160 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 CAPN9O14815 690 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 PLRG1O43660 514 aaKnown RBP9.26□□□□□ -0.93
RPS3A-206ENST00000507485 DFNA5O60443 496 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 LILRA1O75019 489 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 SDC3O75056 442 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 GADD45BO75293 160 aaPredicted RBP9.26□□□□□ -0.93
RPS3A-206ENST00000507485 RFPL3O75679 317 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 CNTN5O94779 1100 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 MT-CO1P00395 513 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 APOEP02649 317 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 CTSLP07711 333 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 TBC1D3HP0C7X1 549 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 SLC9A1P19634 815 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 ABCB4P21439 1286 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 ACADSBP45954 432 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 RXRGP48443 463 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 RNF144AP50876 292 aaPredicted RBP9.26□□□□□ -0.93
RPS3A-206ENST00000507485 YWHAZP63104 245 aaKnown RBP9.26□□□□□ -0.93
RPS3A-206ENST00000507485 TARDBPQ13148 414 aaKnown RBP eCLIP9.26□□□□□ -0.93
RPS3A-206ENST00000507485 ELAVL3Q14576 367 aaKnown RBP9.26□□□□□ -0.93
RPS3A-206ENST00000507485 HES3Q5TGS1 186 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 TBC1D3GQ6DHY5 549 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 TBC1D3CQ6IPX1 549 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 NAPEPLDQ6IQ20 393 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 PASD1Q8IV76 773 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 TBC1D3Q8IZP1 549 aaPredicted RBP9.26□□□□□ -0.93
RPS3A-206ENST00000507485 ZNF557Q8N988 423 aaPredicted RBP9.26□□□□□ -0.93
RPS3A-206ENST00000507485 PIP4K2CQ8TBX8 421 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 PSMB7Q99436 277 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 SRRTQ9BXP5 876 aaKnown RBP9.26□□□□□ -0.93
RPS3A-206ENST00000507485 GTPBP4Q9BZE4 634 aaKnown RBP9.26□□□□□ -0.93
RPS3A-206ENST00000507485 THAP9Q9H5L6 903 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 GDF3Q9NR23 364 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 PPM1HQ9ULR3 514 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 CEP83Q9Y592 693 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 PCDHGA1Q9Y5H4 931 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 RAI2Q9Y5P3 530 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 SNX10Q9Y5X0 201 aa9.26□□□□□ -0.93
RPS3A-206ENST00000507485 PTPRQQ9UMZ3 2332 aa9.25□□□□□ -0.93
RPS3A-206ENST00000507485 A0A1B0GVM2 712 aa9.25□□□□□ -0.93
RPS3A-206ENST00000507485 TCAF2A6NFQ2 919 aa9.25□□□□□ -0.93
RPS3A-206ENST00000507485 F5H5T6 163 aa9.25□□□□□ -0.93
RPS3A-206ENST00000507485 K7ERQ8 282 aa9.25□□□□□ -0.93
RPS3A-206ENST00000507485 TRIM38O00635 465 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms