RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 PGK1P00558 417 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 CALRP27797 417 aaKnown RBP6.09□□□□□ -1.43
SCLT1-207ENST00000506233 CHRNA3P32297 505 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 ABCD1P33897 745 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 CD68P34810 354 aaPredicted RBP6.09□□□□□ -1.43
SCLT1-207ENST00000506233 SLC1A1P43005 524 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 ETV4P43268 484 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 CDR1P51861 262 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 CRYBB1P53674 252 aaPredicted RBP6.09□□□□□ -1.43
SCLT1-207ENST00000506233 AP3M2P53677 418 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 ZXDBP98169 803 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 OLIG2Q13516 323 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 ITGA7Q13683 1181 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 SLC9A5Q14940 896 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 ERMARDQ5T6L9 678 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 LIN54Q6MZP7 749 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 JMJD6Q6NYC1 403 aaPredicted RBP6.09□□□□□ -1.43
SCLT1-207ENST00000506233 LINC00528Q8N1L1 170 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 MPP5Q8N3R9 675 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 ARHGEF39Q8N4T4 335 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 CHST14Q8NCH0 376 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 SIMC1Q8NDZ2 872 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 IPCEF1Q8WWN9 437 aaPredicted RBP6.09□□□□□ -1.43
SCLT1-207ENST00000506233 PGM2Q96G03 612 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 KCNK16Q96T55 309 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 TMEM121Q9BTD3 319 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 FAM124BQ9H5Z6 455 aaPredicted RBP6.09□□□□□ -1.43
SCLT1-207ENST00000506233 KIF9Q9HAQ2 790 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 MED4Q9NPJ6 270 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 NDFIP2Q9NV92 336 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 DRG1Q9Y295 367 aaKnown RBP6.09□□□□□ -1.43
SCLT1-207ENST00000506233 FAM187AA6NFU0 413 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 ARL5CA6NH57 179 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 DVL2O14641 736 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 DCLK1O15075 740 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 EIF3HO15372 352 aaKnown RBP eCLIP6.09□□□□□ -1.43
SCLT1-207ENST00000506233 DYNC1LI2O43237 492 aaPredicted RBP6.09□□□□□ -1.43
SCLT1-207ENST00000506233 TMCC2O75069 709 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 METTL18O95568 372 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 CYP11A1P05108 521 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 CD33P20138 364 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 ITGA8P53708 1063 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 SEC24CP53992 1094 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 KRT17Q04695 432 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 MAP4K2Q12851 820 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 PRKG2Q13237 762 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 PMS2P11Q13670 270 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 ZNF268Q14587 947 aaPredicted RBP6.09□□□□□ -1.43
SCLT1-207ENST00000506233 CNN3Q15417 329 aaKnown RBP6.09□□□□□ -1.43
SCLT1-207ENST00000506233 KCTD16Q68DU8 428 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 PM20D1Q6GTS8 502 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 DDX53Q86TM3 631 aaKnown RBP6.09□□□□□ -1.43
SCLT1-207ENST00000506233 SYCE1Q8N0S2 351 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 LRRC52Q8N7C0 313 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 PPM1NQ8N819 430 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 ADAMTS18Q8TE60 1221 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 CTNNBL1Q8WYA6 563 aaPredicted RBP6.09□□□□□ -1.43
SCLT1-207ENST00000506233 ATP6V1G3Q96LB4 118 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 NPY6RQ99463 290 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 EMILIN2Q9BXX0 1053 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 PIGVQ9NUD9 493 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 PARVAQ9NVD7 372 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 ADAM22Q9P0K1 906 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 LRCH1Q9Y2L9 728 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 HIF3AQ9Y2N7 669 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 NUP205Q92621 2012 aa6.09□□□□□ -1.43
SCLT1-207ENST00000506233 LRRK1Q38SD2 2015 aa6.09□□□□□ -1.44
SCLT1-207ENST00000506233 CXorf49A8MYA2 514 aaPredicted RBP6.09□□□□□ -1.44
SCLT1-207ENST00000506233 ZNF487B1APH4 448 aa6.09□□□□□ -1.44
SCLT1-207ENST00000506233 F8W8V4 182 aa6.09□□□□□ -1.44
SCLT1-207ENST00000506233 DKC1O60832 514 aaKnown RBP eCLIP6.09□□□□□ -1.44
SCLT1-207ENST00000506233 DUSP11O75319 330 aaKnown RBP6.09□□□□□ -1.44
SCLT1-207ENST00000506233 RARGP13631 454 aa6.09□□□□□ -1.44
SCLT1-207ENST00000506233 PTX3P26022 381 aaPredicted RBP6.09□□□□□ -1.44
SCLT1-207ENST00000506233 RPL22P35268 128 aaKnown RBP6.09□□□□□ -1.44
SCLT1-207ENST00000506233 PCK1P35558 622 aa6.09□□□□□ -1.44
SCLT1-207ENST00000506233 WASHC5Q12768 1159 aa6.09□□□□□ -1.44
SCLT1-207ENST00000506233 DPYSL2Q16555 572 aa6.09□□□□□ -1.44
SCLT1-207ENST00000506233 ZNF699Q32M78 642 aa6.09□□□□□ -1.44
SCLT1-207ENST00000506233 GALNTL6Q49A17 601 aa6.09□□□□□ -1.44
SCLT1-207ENST00000506233 FBXO47Q5MNV8 452 aa6.09□□□□□ -1.44
SCLT1-207ENST00000506233 CDHR3Q6ZTQ4 885 aa6.09□□□□□ -1.44
SCLT1-207ENST00000506233 BBS12Q6ZW61 710 aa6.09□□□□□ -1.44
SCLT1-207ENST00000506233 OR10H5Q8NGA6 315 aa6.09□□□□□ -1.44
SCLT1-207ENST00000506233 PARK7Q99497 189 aaKnown RBP6.09□□□□□ -1.44
SCLT1-207ENST00000506233 DPH5Q9H2P9 285 aa6.09□□□□□ -1.44
SCLT1-207ENST00000506233 VPS18Q9P253 973 aa6.09□□□□□ -1.44
SCLT1-207ENST00000506233 WASF2Q9Y6W5 498 aa6.09□□□□□ -1.44
SCLT1-207ENST00000506233 CFAP47Q6ZTR5 3102 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 H0YCG3 227 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 DNM1LO00429 736 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 MAGEB2O15479 319 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 THAP12O43422 761 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 CA12O43570 354 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 AVILO75366 819 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 DHRS4L1P0CG22 281 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 HOXD12P35452 270 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 KRT20P35900 424 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 GMPRP36959 345 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 CLK1P49759 484 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms