RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 NAALADL1Q9UQQ1 740 aa10.17□□□□□ -0.78
NEDD9-210ENST00000505589 ARID1BQ8NFD5 2236 aaPredicted RBP10.17□□□□□ -0.78
NEDD9-210ENST00000505589 A0A1B0GVL5 298 aa10.16□□□□□ -0.78
NEDD9-210ENST00000505589 K7ESM1 405 aa10.16□□□□□ -0.78
NEDD9-210ENST00000505589 KPNA3O00505 521 aaPredicted RBP10.16□□□□□ -0.78
NEDD9-210ENST00000505589 TOR1BO14657 336 aa10.16□□□□□ -0.78
NEDD9-210ENST00000505589 TRUB2O95900 331 aaKnown RBP10.16□□□□□ -0.78
NEDD9-210ENST00000505589 F13A1P00488 732 aa10.16□□□□□ -0.78
NEDD9-210ENST00000505589 GLI1P08151 1106 aa10.16□□□□□ -0.78
NEDD9-210ENST00000505589 CHRNA3P32297 505 aa10.16□□□□□ -0.78
NEDD9-210ENST00000505589 RPL34P49207 117 aaKnown RBP10.16□□□□□ -0.78
NEDD9-210ENST00000505589 STK19P49842 368 aaPredicted RBP10.16□□□□□ -0.78
NEDD9-210ENST00000505589 CDH4P55283 916 aa10.16□□□□□ -0.78
NEDD9-210ENST00000505589 SKOR1P84550 965 aa10.16□□□□□ -0.78
NEDD9-210ENST00000505589 NR0B2Q15466 257 aa10.16□□□□□ -0.78
NEDD9-210ENST00000505589 ZSCAN23Q3MJ62 389 aa10.16□□□□□ -0.78
NEDD9-210ENST00000505589 POM121L1PQ3SYA9 428 aa10.16□□□□□ -0.78
NEDD9-210ENST00000505589 ZC3H12AQ5D1E8 599 aaKnown RBP10.16□□□□□ -0.78
NEDD9-210ENST00000505589 EFHC1Q5JVL4 640 aa10.16□□□□□ -0.78
NEDD9-210ENST00000505589 ZNF574Q6ZN55 896 aaPredicted RBP10.16□□□□□ -0.78
NEDD9-210ENST00000505589 Q6ZSR6 202 aa10.16□□□□□ -0.78
NEDD9-210ENST00000505589 USP53Q70EK8 1073 aa10.16□□□□□ -0.78
NEDD9-210ENST00000505589 ERN2Q76MJ5 926 aaKnown RBP10.16□□□□□ -0.78
NEDD9-210ENST00000505589 ABI3BPQ7Z7G0 1075 aa10.16□□□□□ -0.78
NEDD9-210ENST00000505589 PARGQ86W56 976 aa10.16□□□□□ -0.78
NEDD9-210ENST00000505589 SDR16C5Q8N3Y7 309 aa10.16□□□□□ -0.78
NEDD9-210ENST00000505589 SH2D3CQ8N5H7 860 aa10.16□□□□□ -0.78
NEDD9-210ENST00000505589 ATP11CQ8NB49 1132 aa10.16□□□□□ -0.78
NEDD9-210ENST00000505589 OR6C4Q8NGE1 309 aa10.16□□□□□ -0.78
NEDD9-210ENST00000505589 FAM81BQ96LP2 452 aa10.16□□□□□ -0.78
NEDD9-210ENST00000505589 RPRD1AQ96P16 312 aaPredicted RBP10.16□□□□□ -0.78
NEDD9-210ENST00000505589 SEMA3CQ99985 751 aa10.16□□□□□ -0.78
NEDD9-210ENST00000505589 HDAC8Q9BY41 377 aa10.16□□□□□ -0.78
NEDD9-210ENST00000505589 SLC17A9Q9BYT1 436 aa10.16□□□□□ -0.78
NEDD9-210ENST00000505589 STRADBQ9C0K7 418 aa10.16□□□□□ -0.78
NEDD9-210ENST00000505589 SPASTQ9UBP0 616 aa10.16□□□□□ -0.78
NEDD9-210ENST00000505589 VPS28Q9UK41 221 aa10.16□□□□□ -0.78
NEDD9-210ENST00000505589 SARDHQ9UL12 918 aa10.16□□□□□ -0.78
NEDD9-210ENST00000505589 PAXBP1Q9Y5B6 917 aa10.16□□□□□ -0.78
NEDD9-210ENST00000505589 ZNF462Q96JM2 2506 aa10.15□□□□□ -0.78
NEDD9-210ENST00000505589 CCDC187A0A096LP49 1063 aa10.15□□□□□ -0.78
NEDD9-210ENST00000505589 SPTY2D1-AS1A0A0U1RR47 76 aa10.15□□□□□ -0.78
NEDD9-210ENST00000505589 CPED1A4D0V7 1026 aa10.15□□□□□ -0.78
NEDD9-210ENST00000505589 CDRT15L2A8MXV6 281 aa10.15□□□□□ -0.78
NEDD9-210ENST00000505589 M0QYT0 321 aa10.15□□□□□ -0.78
NEDD9-210ENST00000505589 FPGTO14772 594 aa10.15□□□□□ -0.78
NEDD9-210ENST00000505589 AQP9O43315 295 aa10.15□□□□□ -0.78
NEDD9-210ENST00000505589 BNIP3LO60238 219 aa10.15□□□□□ -0.78
NEDD9-210ENST00000505589 TNFSF15O95150 251 aa10.15□□□□□ -0.78
NEDD9-210ENST00000505589 ITGA2BP08514 1039 aa10.15□□□□□ -0.78
NEDD9-210ENST00000505589 GIMD1P0DJR0 217 aa10.15□□□□□ -0.78
NEDD9-210ENST00000505589 NME1P15531 152 aaKnown RBP10.15□□□□□ -0.78
NEDD9-210ENST00000505589 PFKFB1P16118 471 aa10.15□□□□□ -0.78
NEDD9-210ENST00000505589 TGM2P21980 687 aa10.15□□□□□ -0.78
NEDD9-210ENST00000505589 PPP1R2P41236 205 aa10.15□□□□□ -0.78
NEDD9-210ENST00000505589 BLKP51451 505 aa10.15□□□□□ -0.78
NEDD9-210ENST00000505589 DPYDQ12882 1025 aa10.15□□□□□ -0.78
NEDD9-210ENST00000505589 SPIDRQ14159 915 aa10.15□□□□□ -0.78
NEDD9-210ENST00000505589 FOXD4L6Q3SYB3 417 aaPredicted RBP10.15□□□□□ -0.78
NEDD9-210ENST00000505589 CBWD6Q4V339 395 aa10.15□□□□□ -0.78
NEDD9-210ENST00000505589 ZCWPW2Q504Y3 356 aa10.15□□□□□ -0.78
NEDD9-210ENST00000505589 CBWD3Q5JTY5 395 aa10.15□□□□□ -0.78
NEDD9-210ENST00000505589 CBWD5Q5RIA9 395 aa10.15□□□□□ -0.78
NEDD9-210ENST00000505589 SMYD5Q6GMV2 418 aa10.15□□□□□ -0.78
NEDD9-210ENST00000505589 FOXD4L3Q6VB84 417 aaPredicted RBP10.15□□□□□ -0.78
NEDD9-210ENST00000505589 C14orf80Q86SX3 495 aa10.15□□□□□ -0.78
NEDD9-210ENST00000505589 CLEC14AQ86T13 490 aa10.15□□□□□ -0.78
NEDD9-210ENST00000505589 TMEM110Q86TL2 294 aa10.15□□□□□ -0.78
NEDD9-210ENST00000505589 PPM1KQ8N3J5 372 aa10.15□□□□□ -0.78
NEDD9-210ENST00000505589 OR13H1Q8NG92 308 aa10.15□□□□□ -0.78
NEDD9-210ENST00000505589 RAB7BQ96AH8 199 aa10.15□□□□□ -0.78
NEDD9-210ENST00000505589 ARHGEF26Q96DR7 871 aa10.15□□□□□ -0.78
NEDD9-210ENST00000505589 TBATAQ96M53 351 aa10.15□□□□□ -0.78
NEDD9-210ENST00000505589 LENG8Q96PV6 779 aaPredicted RBP10.15□□□□□ -0.78
NEDD9-210ENST00000505589 SEMA4CQ9C0C4 833 aa10.15□□□□□ -0.78
NEDD9-210ENST00000505589 MUC3BQ9H195 1237 aa10.15□□□□□ -0.78
NEDD9-210ENST00000505589 UCKL1Q9NWZ5 548 aa10.15□□□□□ -0.78
NEDD9-210ENST00000505589 RRN3Q9NYV6 651 aa10.15□□□□□ -0.78
NEDD9-210ENST00000505589 HPSEQ9Y251 543 aa10.15□□□□□ -0.78
NEDD9-210ENST00000505589 HS3ST2Q9Y278 367 aa10.15□□□□□ -0.78
NEDD9-210ENST00000505589 TBC1D30Q9Y2I9 924 aa10.15□□□□□ -0.78
NEDD9-210ENST00000505589 PCDHB11Q9Y5F2 797 aa10.15□□□□□ -0.78
NEDD9-210ENST00000505589 PCDHGA7Q9Y5G6 932 aa10.15□□□□□ -0.78
NEDD9-210ENST00000505589 ENTPD2Q9Y5L3 495 aa10.15□□□□□ -0.78
NEDD9-210ENST00000505589 PIK3R2O00459 728 aa10.14□□□□□ -0.79
NEDD9-210ENST00000505589 PAK4O96013 591 aaPredicted RBP10.14□□□□□ -0.79
NEDD9-210ENST00000505589 FYNP06241 537 aa10.14□□□□□ -0.79
NEDD9-210ENST00000505589 GPD2P43304 727 aa10.14□□□□□ -0.79
NEDD9-210ENST00000505589 NEK3P51956 506 aa10.14□□□□□ -0.79
NEDD9-210ENST00000505589 KRT85P78386 507 aa10.14□□□□□ -0.79
NEDD9-210ENST00000505589 GCNT1Q02742 428 aa10.14□□□□□ -0.79
NEDD9-210ENST00000505589 LRRC63Q05C16 580 aa10.14□□□□□ -0.79
NEDD9-210ENST00000505589 LRMPQ12912 555 aa10.14□□□□□ -0.79
NEDD9-210ENST00000505589 STIM1Q13586 685 aa10.14□□□□□ -0.79
NEDD9-210ENST00000505589 CDKN3Q16667 212 aa10.14□□□□□ -0.79
NEDD9-210ENST00000505589 ZNF284Q2VY69 593 aa10.14□□□□□ -0.79
NEDD9-210ENST00000505589 COBLL1Q53SF7 1204 aa10.14□□□□□ -0.79
NEDD9-210ENST00000505589 PIP5KL1Q5T9C9 394 aa10.14□□□□□ -0.79
NEDD9-210ENST00000505589 SYPL2Q5VXT5 272 aa10.14□□□□□ -0.79
NEDD9-210ENST00000505589 RETSATQ6NUM9 610 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms