RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 NUSAP1Q9BXS6 441 aaKnown RBP10.07□□□□□ -0.8
NR1I3-220ENST00000505005 TSGA10Q9BZW7 698 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 ZDHHC5Q9C0B5 715 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 BRD8Q9H0E9 1235 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 WSB2Q9NYS7 404 aaPredicted RBP10.07□□□□□ -0.8
NR1I3-220ENST00000505005 MPP6Q9NZW5 540 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 PCSK1NQ9UHG2 260 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 AMACRQ9UHK6 382 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 INTS6Q9UL03 887 aaKnown RBP10.07□□□□□ -0.8
NR1I3-220ENST00000505005 NENFQ9UMX5 172 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 CKAP5Q14008 2032 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 DFNA5O60443 496 aa10.06□□□□□ -0.8
NR1I3-220ENST00000505005 RNGTTO60942 597 aaKnown RBP10.06□□□□□ -0.8
NR1I3-220ENST00000505005 CNTN5O94779 1100 aa10.06□□□□□ -0.8
NR1I3-220ENST00000505005 GSRP00390 522 aa10.06□□□□□ -0.8
NR1I3-220ENST00000505005 SYPP08247 313 aa10.06□□□□□ -0.8
NR1I3-220ENST00000505005 ZNF806P0C7X5 589 aa10.06□□□□□ -0.8
NR1I3-220ENST00000505005 KRT10P13645 584 aa10.06□□□□□ -0.8
NR1I3-220ENST00000505005 GOT1P17174 413 aa10.06□□□□□ -0.8
NR1I3-220ENST00000505005 MZF1P28698 734 aaPredicted RBP10.06□□□□□ -0.8
NR1I3-220ENST00000505005 SERPINH1P50454 418 aaKnown RBP10.06□□□□□ -0.8
NR1I3-220ENST00000505005 ATXN1P54253 815 aaKnown RBP10.06□□□□□ -0.8
NR1I3-220ENST00000505005 CDH6P55285 790 aa10.06□□□□□ -0.8
NR1I3-220ENST00000505005 POLR2LP62875 67 aaKnown RBP10.06□□□□□ -0.8
NR1I3-220ENST00000505005 NSUN2Q08J23 767 aaKnown RBP eCLIP10.06□□□□□ -0.8
NR1I3-220ENST00000505005 MESP2Q0VG99 397 aa10.06□□□□□ -0.8
NR1I3-220ENST00000505005 KIF5AQ12840 1032 aa10.06□□□□□ -0.8
NR1I3-220ENST00000505005 CST6Q15828 149 aa10.06□□□□□ -0.8
NR1I3-220ENST00000505005 CSRP2Q16527 193 aa10.06□□□□□ -0.8
NR1I3-220ENST00000505005 DUOXA1Q1HG43 343 aa10.06□□□□□ -0.8
NR1I3-220ENST00000505005 MAP7D1Q3KQU3 841 aa10.06□□□□□ -0.8
NR1I3-220ENST00000505005 CARD16Q5EG05 197 aa10.06□□□□□ -0.8
NR1I3-220ENST00000505005 SH3PXD2AQ5TCZ1 1133 aa10.06□□□□□ -0.8
NR1I3-220ENST00000505005 LYSMD4Q5XG99 296 aa10.06□□□□□ -0.8
NR1I3-220ENST00000505005 CYP2U1Q7Z449 544 aa10.06□□□□□ -0.8
NR1I3-220ENST00000505005 NDUFAF2Q8N183 169 aa10.06□□□□□ -0.8
NR1I3-220ENST00000505005 FAM160A2Q8N612 972 aaPredicted RBP10.06□□□□□ -0.8
NR1I3-220ENST00000505005 WFDC5Q8TCV5 224 aa10.06□□□□□ -0.8
NR1I3-220ENST00000505005 PTPRN2Q92932 1015 aa10.06□□□□□ -0.8
NR1I3-220ENST00000505005 ZNF419Q96HQ0 510 aaPredicted RBP10.06□□□□□ -0.8
NR1I3-220ENST00000505005 MRGPRX3Q96LB0 322 aa10.06□□□□□ -0.8
NR1I3-220ENST00000505005 HEPHQ9BQS7 1158 aa10.06□□□□□ -0.8
NR1I3-220ENST00000505005 TPSD1Q9BZJ3 242 aa10.06□□□□□ -0.8
NR1I3-220ENST00000505005 OSGEPQ9NPF4 335 aa10.06□□□□□ -0.8
NR1I3-220ENST00000505005 FAM86C1Q9NVL1 165 aa10.06□□□□□ -0.8
NR1I3-220ENST00000505005 KCTD5Q9NXV2 234 aa10.06□□□□□ -0.8
NR1I3-220ENST00000505005 DNAI1Q9UI46 699 aa10.06□□□□□ -0.8
NR1I3-220ENST00000505005 VPS51Q9UID3 782 aa10.06□□□□□ -0.8
NR1I3-220ENST00000505005 PCDHA13Q9Y5I0 950 aa10.06□□□□□ -0.8
NR1I3-220ENST00000505005 IGHV1OR15-9A0A0B4J2B8 117 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 BCLAF3A2AJT9 711 aaKnown RBP10.05□□□□□ -0.8
NR1I3-220ENST00000505005 WASH3PC4AMC7 463 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 RASA4BC9J798 803 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 KHNYNO15037 678 aaKnown RBP10.05□□□□□ -0.8
NR1I3-220ENST00000505005 ATMINO43313 823 aaPredicted RBP10.05□□□□□ -0.8
NR1I3-220ENST00000505005 RASA4O43374 803 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 PSTPIP1O43586 416 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 BUB1O43683 1085 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 KRT86O43790 486 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 SPOPO43791 374 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 SIN3BO75182 1162 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 NEBLO76041 1014 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 IGSF6O95976 241 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 IL1BP01584 269 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 RARAP10276 462 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 SRCP12931 536 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 ERCC2P18074 760 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 CA4P22748 312 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 PRKCHP24723 683 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 SLC8A1P32418 973 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 CSNK1DP48730 415 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 DHPSP49366 369 aaPredicted RBP10.05□□□□□ -0.8
NR1I3-220ENST00000505005 TPMTP51580 245 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 COPAP53621 1224 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 NAP1L1P55209 391 aaKnown RBP10.05□□□□□ -0.8
NR1I3-220ENST00000505005 RPS14P62263 151 aaKnown RBP10.05□□□□□ -0.8
NR1I3-220ENST00000505005 IL10RBQ08334 325 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 SERINC3Q13530 473 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 TFDP2Q14188 446 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 MESDQ14696 234 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 TEAD4Q15561 434 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 C9orf64Q5T6V5 341 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 IL27RAQ6UWB1 636 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 KIAA1328Q86T90 577 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 ALYREFQ86V81 257 aaKnown RBP10.05□□□□□ -0.8
NR1I3-220ENST00000505005 RNF10Q8N5U6 811 aaKnown RBP10.05□□□□□ -0.8
NR1I3-220ENST00000505005 OR2T34Q8NGX1 318 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 FAM71BQ8TC56 605 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.05□□□□□ -0.8
NR1I3-220ENST00000505005 FATE1Q969F0 183 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 MYO19Q96H55 970 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 RPL10LQ96L21 214 aaKnown RBP10.05□□□□□ -0.8
NR1I3-220ENST00000505005 GDAP1L1Q96MZ0 367 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 ADAM33Q9BZ11 813 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 CPEB1Q9BZB8 566 aaKnown RBP10.05□□□□□ -0.8
NR1I3-220ENST00000505005 MKRN2Q9H000 416 aaKnown RBP10.05□□□□□ -0.8
NR1I3-220ENST00000505005 PABPC3Q9H361 631 aaKnown RBP10.05□□□□□ -0.8
NR1I3-220ENST00000505005 SP110Q9HB58 689 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 CD248Q9HCU0 757 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms