RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 ALG14Q96F25 216 aa14.3□□□□□ -0.12
CCDC58-207ENST00000498466 IFT43Q96FT9 208 aa14.3□□□□□ -0.12
CCDC58-207ENST00000498466 ATXN7L3BQ96GX2 97 aa14.3□□□□□ -0.12
CCDC58-207ENST00000498466 SLC46A1Q96NT5 459 aa14.3□□□□□ -0.12
CCDC58-207ENST00000498466 FEM1AQ9BSK4 669 aa14.3□□□□□ -0.12
CCDC58-207ENST00000498466 FAM204AQ9H8W3 233 aa14.3□□□□□ -0.12
CCDC58-207ENST00000498466 COX16Q9P0S2 106 aa14.3□□□□□ -0.12
CCDC58-207ENST00000498466 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.29□□□□□ -0.12
CCDC58-207ENST00000498466 FAM237AA0A1B0GTK4 181 aa14.29□□□□□ -0.12
CCDC58-207ENST00000498466 CPED1A4D0V7 1026 aa14.29□□□□□ -0.12
CCDC58-207ENST00000498466 A6NNZ2 444 aa14.29□□□□□ -0.12
CCDC58-207ENST00000498466 IGLV3-25P01717 112 aa14.29□□□□□ -0.12
CCDC58-207ENST00000498466 CENPBP07199 599 aaPredicted RBP14.29□□□□□ -0.12
CCDC58-207ENST00000498466 CTSLP07711 333 aa14.29□□□□□ -0.12
CCDC58-207ENST00000498466 SLC2A3P11169 496 aa14.29□□□□□ -0.12
CCDC58-207ENST00000498466 PRCPP42785 496 aa14.29□□□□□ -0.12
CCDC58-207ENST00000498466 RPL34P49207 117 aaKnown RBP14.29□□□□□ -0.12
CCDC58-207ENST00000498466 FMO5P49326 533 aa14.29□□□□□ -0.12
CCDC58-207ENST00000498466 YWHAZP63104 245 aaKnown RBP14.29□□□□□ -0.12
CCDC58-207ENST00000498466 PITX1P78337 314 aaPredicted RBP14.29□□□□□ -0.12
CCDC58-207ENST00000498466 ZNF177Q13360 481 aaPredicted RBP14.29□□□□□ -0.12
CCDC58-207ENST00000498466 ANKRD40Q6AI12 368 aa14.29□□□□□ -0.12
CCDC58-207ENST00000498466 OR6B2Q6IFH4 312 aa14.29□□□□□ -0.12
CCDC58-207ENST00000498466 ZCCHC8Q6NZY4 707 aaKnown RBP14.29□□□□□ -0.12
CCDC58-207ENST00000498466 FBXL22Q6P050 247 aa14.29□□□□□ -0.12
CCDC58-207ENST00000498466 RRAGAQ7L523 313 aa14.29□□□□□ -0.12
CCDC58-207ENST00000498466 ABI3BPQ7Z7G0 1075 aa14.29□□□□□ -0.12
CCDC58-207ENST00000498466 OR52K2Q8NGK3 314 aa14.29□□□□□ -0.12
CCDC58-207ENST00000498466 GRAMD1AQ96CP6 724 aa14.29□□□□□ -0.12
CCDC58-207ENST00000498466 CCDC114Q96M63 670 aa14.29□□□□□ -0.12
CCDC58-207ENST00000498466 MED15Q96RN5 788 aa14.29□□□□□ -0.12
CCDC58-207ENST00000498466 MUC3BQ9H195 1237 aa14.29□□□□□ -0.12
CCDC58-207ENST00000498466 WDR70Q9NW82 654 aa14.29□□□□□ -0.12
CCDC58-207ENST00000498466 BOD1L1Q8NFC6 3051 aa14.28□□□□□ -0.12
CCDC58-207ENST00000498466 A0A1W2PNU3 283 aaPredicted RBP14.28□□□□□ -0.12
CCDC58-207ENST00000498466 COL6A6A6NMZ7 2263 aa14.28□□□□□ -0.12
CCDC58-207ENST00000498466 E5RJQ4 531 aa14.28□□□□□ -0.12
CCDC58-207ENST00000498466 H3BM21 787 aa14.28□□□□□ -0.12
CCDC58-207ENST00000498466 LZTS3O60299 673 aaPredicted RBP14.28□□□□□ -0.12
CCDC58-207ENST00000498466 SRCP12931 536 aa14.28□□□□□ -0.12
CCDC58-207ENST00000498466 CCR1P32246 355 aa14.28□□□□□ -0.12
CCDC58-207ENST00000498466 CHRNA3P32297 505 aa14.28□□□□□ -0.12
CCDC58-207ENST00000498466 SKOR1P84550 965 aa14.28□□□□□ -0.12
CCDC58-207ENST00000498466 ZSCAN23Q3MJ62 389 aa14.28□□□□□ -0.12
CCDC58-207ENST00000498466 SEL1L3Q68CR1 1132 aa14.28□□□□□ -0.12
CCDC58-207ENST00000498466 DENND1BQ6P3S1 775 aa14.28□□□□□ -0.12
CCDC58-207ENST00000498466 GUSBP11Q6P575 273 aa14.28□□□□□ -0.12
CCDC58-207ENST00000498466 RBM44Q6ZP01 1051 aaKnown RBP14.28□□□□□ -0.12
CCDC58-207ENST00000498466 EFL1Q7Z2Z2 1120 aaKnown RBP14.28□□□□□ -0.12
CCDC58-207ENST00000498466 DCP2Q8IU60 420 aaKnown RBP14.28□□□□□ -0.12
CCDC58-207ENST00000498466 ATP11CQ8NB49 1132 aa14.28□□□□□ -0.12
CCDC58-207ENST00000498466 ZNF548Q8NEK5 533 aaPredicted RBP14.28□□□□□ -0.12
CCDC58-207ENST00000498466 FAM174AQ8TBP5 190 aa14.28□□□□□ -0.12
CCDC58-207ENST00000498466 ARRDC3Q96B67 414 aa14.28□□□□□ -0.12
CCDC58-207ENST00000498466 CCDC34Q96HJ3 373 aa14.28□□□□□ -0.12
CCDC58-207ENST00000498466 THAP9Q9H5L6 903 aa14.28□□□□□ -0.12
CCDC58-207ENST00000498466 DDIT4Q9NX09 232 aa14.28□□□□□ -0.12
CCDC58-207ENST00000498466 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.28□□□□□ -0.12
CCDC58-207ENST00000498466 NCKIPSDQ9NZQ3 722 aa14.28□□□□□ -0.12
CCDC58-207ENST00000498466 VANGL2Q9ULK5 521 aa14.28□□□□□ -0.12
CCDC58-207ENST00000498466 ZFR2Q9UPR6 939 aaKnown RBP14.28□□□□□ -0.12
CCDC58-207ENST00000498466 PCDHGA8Q9Y5G5 932 aa14.28□□□□□ -0.12
CCDC58-207ENST00000498466 ENTPD2Q9Y5L3 495 aa14.28□□□□□ -0.12
CCDC58-207ENST00000498466 HEMK1Q9Y5R4 338 aaPredicted RBP14.28□□□□□ -0.12
CCDC58-207ENST00000498466 HECTD1Q9ULT8 2610 aa14.28□□□□□ -0.12
CCDC58-207ENST00000498466 ZNF202O95125 648 aa14.27□□□□□ -0.13
CCDC58-207ENST00000498466 MT-CO1P00395 513 aa14.27□□□□□ -0.13
CCDC58-207ENST00000498466 CSF2P04141 144 aa14.27□□□□□ -0.13
CCDC58-207ENST00000498466 PRNPP04156 253 aa14.27□□□□□ -0.13
CCDC58-207ENST00000498466 IRAK1P51617 712 aa14.27□□□□□ -0.13
CCDC58-207ENST00000498466 PMS1P54277 932 aaKnown RBP14.27□□□□□ -0.13
CCDC58-207ENST00000498466 KRT83P78385 493 aa14.27□□□□□ -0.13
CCDC58-207ENST00000498466 KRT85P78386 507 aa14.27□□□□□ -0.13
CCDC58-207ENST00000498466 CDK17Q00537 523 aa14.27□□□□□ -0.13
CCDC58-207ENST00000498466 CETN1Q12798 172 aa14.27□□□□□ -0.13
CCDC58-207ENST00000498466 NFATC3Q12968 1075 aa14.27□□□□□ -0.13
CCDC58-207ENST00000498466 EIF4EBP2Q13542 120 aaPredicted RBP14.27□□□□□ -0.13
CCDC58-207ENST00000498466 AUHQ13825 339 aaKnown RBP14.27□□□□□ -0.13
CCDC58-207ENST00000498466 CRTC1Q6UUV9 634 aa14.27□□□□□ -0.13
CCDC58-207ENST00000498466 ERN2Q76MJ5 926 aaKnown RBP14.27□□□□□ -0.13
CCDC58-207ENST00000498466 PARGQ86W56 976 aa14.27□□□□□ -0.13
CCDC58-207ENST00000498466 ARL14Q8N4G2 192 aa14.27□□□□□ -0.13
CCDC58-207ENST00000498466 TMIEQ8NEW7 156 aa14.27□□□□□ -0.13
CCDC58-207ENST00000498466 OR2A12Q8NGT7 310 aa14.27□□□□□ -0.13
CCDC58-207ENST00000498466 TPCN2Q8NHX9 752 aa14.27□□□□□ -0.13
CCDC58-207ENST00000498466 GRIN3AQ8TCU5 1115 aa14.27□□□□□ -0.13
CCDC58-207ENST00000498466 STK32AQ8WU08 396 aa14.27□□□□□ -0.13
CCDC58-207ENST00000498466 SNX21Q969T3 373 aa14.27□□□□□ -0.13
CCDC58-207ENST00000498466 BMFQ96LC9 184 aa14.27□□□□□ -0.13
CCDC58-207ENST00000498466 SLC4A5Q9BY07 1137 aa14.27□□□□□ -0.13
CCDC58-207ENST00000498466 FAM117AQ9C073 453 aa14.27□□□□□ -0.13
CCDC58-207ENST00000498466 GOLPH3LQ9H4A5 285 aa14.27□□□□□ -0.13
CCDC58-207ENST00000498466 METTL14Q9HCE5 456 aaKnown RBP14.27□□□□□ -0.13
CCDC58-207ENST00000498466 RMND1Q9NWS8 449 aa14.27□□□□□ -0.13
CCDC58-207ENST00000498466 IPO11Q9UI26 975 aaKnown RBP14.27□□□□□ -0.13
CCDC58-207ENST00000498466 HS3ST2Q9Y278 367 aa14.27□□□□□ -0.13
CCDC58-207ENST00000498466 OR51B4Q9Y5P0 310 aa14.27□□□□□ -0.13
CCDC58-207ENST00000498466 HS3ST3A1Q9Y663 406 aa14.27□□□□□ -0.13
CCDC58-207ENST00000498466 COL12A1Q99715 3063 aa14.27□□□□□ -0.13
CCDC58-207ENST00000498466 TRIM49BA6NDI0 452 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms