RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 PDGFRLQ15198 375 aa16■□□□□ 0.15
PHF1-211ENST00000495509 TEX44Q53QW1 395 aa16■□□□□ 0.15
PHF1-211ENST00000495509 LINGO4Q6UY18 593 aa16■□□□□ 0.15
PHF1-211ENST00000495509 ZNF783Q6ZMS7 281 aa16■□□□□ 0.15
PHF1-211ENST00000495509 PID1Q7Z2X4 250 aa16■□□□□ 0.15
PHF1-211ENST00000495509 CCDC117Q8IWD4 279 aaPredicted RBP16■□□□□ 0.15
PHF1-211ENST00000495509 IFT20Q8IY31 132 aa16■□□□□ 0.15
PHF1-211ENST00000495509 SPATA13Q96N96 652 aa16■□□□□ 0.15
PHF1-211ENST00000495509 TRMT61BQ9BVS5 477 aaKnown RBP16■□□□□ 0.15
PHF1-211ENST00000495509 PDFQ9HBH1 243 aa16■□□□□ 0.15
PHF1-211ENST00000495509 LIMD1Q9UGP4 676 aa16■□□□□ 0.15
PHF1-211ENST00000495509 VPS28Q9UK41 221 aa16■□□□□ 0.15
PHF1-211ENST00000495509 ZMPSTE24O75844 475 aa16■□□□□ 0.15
PHF1-211ENST00000495509 ADH1CP00326 375 aa16■□□□□ 0.15
PHF1-211ENST00000495509 ETFBP38117 255 aa16■□□□□ 0.15
PHF1-211ENST00000495509 SLC6A11P48066 632 aa16■□□□□ 0.15
PHF1-211ENST00000495509 DRG2P55039 364 aaKnown RBP16■□□□□ 0.15
PHF1-211ENST00000495509 IFI35P80217 286 aaPredicted RBP16■□□□□ 0.15
PHF1-211ENST00000495509 GAD2Q05329 585 aa16■□□□□ 0.15
PHF1-211ENST00000495509 MESP2Q0VG99 397 aa16■□□□□ 0.15
PHF1-211ENST00000495509 NAIF1Q69YI7 327 aaPredicted RBP16■□□□□ 0.15
PHF1-211ENST00000495509 TIGD7Q6NT04 549 aaPredicted RBP16■□□□□ 0.15
PHF1-211ENST00000495509 CCNI2Q6ZMN8 369 aaPredicted RBP16■□□□□ 0.15
PHF1-211ENST00000495509 MTSS1LQ765P7 747 aa16■□□□□ 0.15
PHF1-211ENST00000495509 GSPT2Q8IYD1 628 aaKnown RBP16■□□□□ 0.15
PHF1-211ENST00000495509 MAML1Q92585 1016 aa16■□□□□ 0.15
PHF1-211ENST00000495509 TEKT5Q96M29 485 aa16■□□□□ 0.15
PHF1-211ENST00000495509 IL12RB2Q99665 862 aa16■□□□□ 0.15
PHF1-211ENST00000495509 NEUROG2Q9H2A3 272 aa16■□□□□ 0.15
PHF1-211ENST00000495509 RBM22Q9NW64 420 aaKnown RBP eCLIP16■□□□□ 0.15
PHF1-211ENST00000495509 KLHL8Q9P2G9 620 aaPredicted RBP16■□□□□ 0.15
PHF1-211ENST00000495509 MIA3Q5JRA6 1907 aa15.99■□□□□ 0.15
PHF1-211ENST00000495509 CHADO15335 359 aa15.99■□□□□ 0.15
PHF1-211ENST00000495509 HOXC11O43248 304 aaPredicted RBP15.99■□□□□ 0.15
PHF1-211ENST00000495509 MTSS1O43312 755 aa15.99■□□□□ 0.15
PHF1-211ENST00000495509 RRP9O43818 475 aaKnown RBP15.99■□□□□ 0.15
PHF1-211ENST00000495509 CACNG3O60359 315 aa15.99■□□□□ 0.15
PHF1-211ENST00000495509 STK10O94804 968 aaKnown RBP15.99■□□□□ 0.15
PHF1-211ENST00000495509 SEC31AO94979 1220 aaKnown RBP15.99■□□□□ 0.15
PHF1-211ENST00000495509 CD160O95971 181 aa15.99■□□□□ 0.15
PHF1-211ENST00000495509 MT-CO1P00395 513 aa15.99■□□□□ 0.15
PHF1-211ENST00000495509 CISD3P0C7P0 127 aa15.99■□□□□ 0.15
PHF1-211ENST00000495509 ARF5P84085 180 aa15.99■□□□□ 0.15
PHF1-211ENST00000495509 RUNX3Q13761 415 aa15.99■□□□□ 0.15
PHF1-211ENST00000495509 SMAD2Q15796 467 aaKnown RBP15.99■□□□□ 0.15
PHF1-211ENST00000495509 AAK1Q2M2I8 961 aa15.99■□□□□ 0.15
PHF1-211ENST00000495509 PLEKHG6Q3KR16 790 aa15.99■□□□□ 0.15
PHF1-211ENST00000495509 LEXMQ3ZCV2 418 aa15.99■□□□□ 0.15
PHF1-211ENST00000495509 TMEM215Q68D42 235 aa15.99■□□□□ 0.15
PHF1-211ENST00000495509 WDR93Q6P2C0 686 aa15.99■□□□□ 0.15
PHF1-211ENST00000495509 ZDHHC24Q6UX98 284 aa15.99■□□□□ 0.15
PHF1-211ENST00000495509 ARHGEF18Q6ZSZ5 1173 aa15.99■□□□□ 0.15
PHF1-211ENST00000495509 SNF8Q96H20 258 aa15.99■□□□□ 0.15
PHF1-211ENST00000495509 FERMT1Q9BQL6 677 aa15.99■□□□□ 0.15
PHF1-211ENST00000495509 PHF7Q9BWX1 381 aaPredicted RBP15.99■□□□□ 0.15
PHF1-211ENST00000495509 ETNK1Q9HBU6 452 aa15.99■□□□□ 0.15
PHF1-211ENST00000495509 RAB6BQ9NRW1 208 aa15.99■□□□□ 0.15
PHF1-211ENST00000495509 PAK5Q9P286 719 aa15.99■□□□□ 0.15
PHF1-211ENST00000495509 VPS51Q9UID3 782 aa15.99■□□□□ 0.15
PHF1-211ENST00000495509 GGA2Q9UJY4 613 aa15.99■□□□□ 0.15
PHF1-211ENST00000495509 FBXO10Q9UK96 956 aa15.99■□□□□ 0.15
PHF1-211ENST00000495509 HPCAL4Q9UM19 191 aa15.99■□□□□ 0.15
PHF1-211ENST00000495509 NFU1Q9UMS0 254 aa15.99■□□□□ 0.15
PHF1-211ENST00000495509 TCRBV7S3A2A0A539 114 aa15.98■□□□□ 0.15
PHF1-211ENST00000495509 TTC24A2A3L6 582 aaPredicted RBP15.98■□□□□ 0.15
PHF1-211ENST00000495509 ARNTLO00327 626 aa15.98■□□□□ 0.15
PHF1-211ENST00000495509 HLA-DQB2P05538 268 aa15.98■□□□□ 0.15
PHF1-211ENST00000495509 ECHS1P30084 290 aa15.98■□□□□ 0.15
PHF1-211ENST00000495509 ACTN2P35609 894 aa15.98■□□□□ 0.15
PHF1-211ENST00000495509 CTSOP43234 321 aaPredicted RBP15.98■□□□□ 0.15
PHF1-211ENST00000495509 ITGA8P53708 1063 aa15.98■□□□□ 0.15
PHF1-211ENST00000495509 PLTPP55058 493 aa15.98■□□□□ 0.15
PHF1-211ENST00000495509 HNRNPDQ14103 355 aaKnown RBP15.98■□□□□ 0.15
PHF1-211ENST00000495509 LBRQ14739 615 aaKnown RBP15.98■□□□□ 0.15
PHF1-211ENST00000495509 FUT11Q495W5 492 aa15.98■□□□□ 0.15
PHF1-211ENST00000495509 PITRM1Q5JRX3 1037 aa15.98■□□□□ 0.15
PHF1-211ENST00000495509 MARC1Q5VT66 337 aa15.98■□□□□ 0.15
PHF1-211ENST00000495509 IZUMO3Q5VZ72 239 aa15.98■□□□□ 0.15
PHF1-211ENST00000495509 PTCRAQ6ISU1 281 aaPredicted RBP15.98■□□□□ 0.15
PHF1-211ENST00000495509 PGBD5Q8N414 524 aa15.98■□□□□ 0.15
PHF1-211ENST00000495509 CCHCR1Q8TD31 782 aa15.98■□□□□ 0.15
PHF1-211ENST00000495509 FATE1Q969F0 183 aa15.98■□□□□ 0.15
PHF1-211ENST00000495509 GORASP1Q9BQQ3 440 aa15.98■□□□□ 0.15
PHF1-211ENST00000495509 DNAJC17Q9NVM6 304 aaKnown RBP15.98■□□□□ 0.15
PHF1-211ENST00000495509 RAB21Q9UL25 225 aa15.98■□□□□ 0.15
PHF1-211ENST00000495509 DNALI1O14645 258 aaPredicted RBP15.98■□□□□ 0.15
PHF1-211ENST00000495509 MUSKO15146 869 aa15.98■□□□□ 0.15
PHF1-211ENST00000495509 OPHN1O60890 802 aa15.98■□□□□ 0.15
PHF1-211ENST00000495509 TULP3O75386 442 aa15.98■□□□□ 0.15
PHF1-211ENST00000495509 PABPC1P11940 636 aaKnown RBP15.98■□□□□ 0.15
PHF1-211ENST00000495509 PSMB4P28070 264 aa15.98■□□□□ 0.15
PHF1-211ENST00000495509 PLK1P53350 603 aa15.98■□□□□ 0.15
PHF1-211ENST00000495509 MAXP61244 160 aa15.98■□□□□ 0.15
PHF1-211ENST00000495509 BASP1P80723 227 aaKnown RBP15.98■□□□□ 0.15
PHF1-211ENST00000495509 GEN1Q17RS7 908 aa15.98■□□□□ 0.15
PHF1-211ENST00000495509 ANKRD22Q5VYY1 191 aa15.98■□□□□ 0.15
PHF1-211ENST00000495509 ADIPOR2Q86V24 386 aa15.98■□□□□ 0.15
PHF1-211ENST00000495509 ETFBKMTQ8IXQ9 262 aa15.98■□□□□ 0.15
PHF1-211ENST00000495509 TEX26Q8N6G2 289 aa15.98■□□□□ 0.15
PHF1-211ENST00000495509 DCAF4L2Q8NA75 395 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms